FFCP PHASE1:Hg19::chr6:33282163..33282211,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:33282163..33282211,-
|short_description=p7@TAPBP
|description=CAGE_peak_7_at_TAPBP_5end
|association_with_transcript=0bp_to_ENST00000434618,ENST00000456592...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6892 | |EntrezGene=6892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11566 | |HGNC=11566 | ||
|TSSclassifier=strong | |||
|UniProt=D3YTI9,Q6P1N7,O15533,B2ZUA4,E9PGM2 | |UniProt=D3YTI9,Q6P1N7,O15533,B2ZUA4,E9PGM2 | ||
|association_with_transcript=0bp_to_ENST00000434618,ENST00000456592,ENST00000458089,NM_003190,NM_172208,NM_172209_5end | |||
|cluster_id=chr6:33282163..33282211,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_TAPBP_5end | |||
|id=chr6:33282163..33282211,- | |||
|ontology_enrichment_celltype=CL:0002057!3.24e-11!42;CL:0000860!1.16e-09!45;CL:0000557!9.12e-08!71;CL:0000766!1.33e-07!76;CL:0002009!6.77e-07!65;CL:0000839!9.80e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.28e-19;33!CL:0002057;7.28e-19;33!CL:0000473;4.88e-14;39!CL:0000234;4.88e-14;39!CL:0000576;1.37e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-16,42;CL:0002057,1.38e-16,42;CL:0000473,1.84e-15,48;CL:0000234,1.84e-15,48;CL:0000557,2.04e-13,67;CL:0000766,2.59e-12,72;CL:0000839,5.07e-12,66;CL:0002009,5.46e-12,61;CL:0002194,5.10e-11,59;CL:0000576,5.10e-11,59;CL:0000040,5.10e-11,59;CL:0000559,5.10e-11,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!2.19e-14!625;UBERON:0000480!4.16e-14!626;UBERON:0000062!3.72e-12!511;UBERON:0000468!4.31e-12!659;UBERON:0002050!2.16e-09!605;UBERON:0005423!2.16e-09!605;UBERON:0000923!3.80e-09!604;UBERON:0005291!3.80e-09!604;UBERON:0006598!3.80e-09!604;UBERON:0002532!3.80e-09!604;UBERON:0000922!3.29e-08!612;UBERON:0007023!7.15e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.60e-09;20!UBERON:0002619;2.36e-09;22!UBERON:0000956;1.56e-07;25!UBERON:0000203;1.56e-07;25!UBERON:0001869;7.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-10,76;UBERON:0001950,6.16e-10,20;UBERON:0002619,9.28e-10,22;UBERON:0002405,1.48e-09,93;UBERON:0001474,2.00e-09,82;UBERON:0001869,5.41e-08,32;UBERON:0000956,7.15e-08,25;UBERON:0000203,7.15e-08,25;UBERON:0004765,8.46e-08,90;UBERON:0003081,2.30e-07,203;UBERON:0001434,3.26e-07,100;UBERON:0001893,4.06e-07,34;UBERON:0000926,4.35e-07,315;UBERON:0004120,4.35e-07,315;UBERON:0006603,4.35e-07,315;UBERON:0002791,5.46e-07,32;UBERON:0002390,8.40e-07,98;UBERON:0003061,8.40e-07,98 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0,0.872338524100369,0,0,0.261185628199839,0.982935746006035,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.61560529038394,0,1.25381888591235,0,0.136874425072884,0.502170558379211,0,0,0.0787107813136792,0.786728553697808,0,1.70297735647684,0,0,1.84877005083394,0,0,0,2.76997704265939,1.80490002723128,3.47217393145363,0,0.32389366601898,0,1.01778767145695,1.51150377475524,2.66842467306598,4.18372266430232,4.93401465626191,10.8397229813286,6.32923263108731,4.86705342405291,5.20260905754887,10.3423704220986,9.68227025375739,13.5426486594342,3.01187743268168,4.09359225086769,6.51698104890745,11.0190201253525,14.1208771913481,17.9014395223732,0.659702600373432,1.59570926097305,4.26224750532694,17.1223450790865,20.9932533135722,23.0444232128363,3.26623264833766,1.5644487552606,7.16723187526885,13.3187890579341,22.0966581592539,18.0383560841304,0.211255286311942,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.80254281490768,0,0.393419540227666,0.786021525498329,0.205601498999509,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,2.01210257911091,0.511450247374121,0.361439152384566,0.50133791063589,1.30361867064741,0,2.91980922181582,0.756278537312543,1.33037638477538,0.702678285545008,2.61958150995425,1.82147644146271,0,1.62273696827342,0.174129737299267,1.06366368415092,0.238490624305342,0,0.371457501329565,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,0.550236083880135,0.417989933073621,2.84258435086262,0.71153252537342,1.33888245105868,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.44905874525234,0.225222960966644,0,0.949265659568129,0.549605231791222,2.63560834872127,7.75560528296651,0,0,0.759783069987479,1.85372853138506,1.72101972449288,0.709336764396714,1.12135520028461,4.2699598291882,4.44001587150888,0.622422070799533,3.09834545760283,0.490385709340376,0.302714855289863,0,1.17160715916898,1.5608003841516,0,1.34503812496621,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0,0,0.494533858557114,0,2.15585442544872,0,0,0,0,0.30648779579902,0.150238058906597,0.340296549480063,1.97328599257748,1.06778694409284,0.635795703478686,1.80054657650641,2.47326070172253,3.60696756063881,1.48893485065272,0.675105328965065,0.974370051611986,1.26216887122057,1.01254888506529,1.45481451136931,2.4850671476163,1.10827308050404,1.01736355386293,0.57978255948989,1.36373060295417,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0,0.236613600079688,0.674338760312407,0,0.330881918197182,0.653638332277218,0.237270619111097,0.808987848960987,0.196221465125346,0.769494313892781,0,5.60967095213783,2.057870056657,0,0,0,0.590789906681404,0,0.614942192715568,0.514703430895577,1.20725313949488,4.49607013030478,0.301586917234893,0.555530670951178,0.651616610620649,0,0,0.231860809950154,0.234817388471643,0.721832238805369,0,1.14152491340759,0,0,0.246217006087397,0.936017060556951,1.0404181360211,0.93733833986777,1.17587489739202,0.850650583454319,1.79117045405697,1.74380363108377,0,2.95597942737566,0.44024217006613,6.21984346622316,2.88239906833923,4.03975786964416,0.253991577168676,0.763976851116555,0,3.4214489204541,0.514137463516618,0.901029173531752,1.42913216315289,0.448524337381443,0.43596006883328,0.22001485746285,0.775630294546667,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0,1.69954085009497,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,0,0,0.434343920002738,2.87666851570537,0.358121926479791,0,0.394061520403854,0.646882724578552,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0.271265023699736,1.24782516918484,1.42743191037729,0.788512075169673,0.585707074963566,0.601892199455438,0,0,0.664225598535437,0.737476674166813,0.60818530127658,1.37060810223918,0.343143423810856,0.413536052245775,1.2942852049117,0.533637789017222,0.909382714338778,1.66435439510497,0.907170879989041,0.496215615637554,0.153461973288062,0.280660094433074,0.512556597022804,0,0.482561763430822,1.48418066444991,0.925258162815933,1.24293207719189,0.164254312027618,1.03850885836724,0.348631135379878,0.483437798366489,0.40101294060657,1.01289087829486,0.574072240823034,0.546273504020151,0.786746489756545,0.902399225814824,1.00119938235739,0.784349769176855,0,0.211103257785751,1.13733384070897,0.850468526382578,0.863663664408557,3.08454505380579,0.812839312631559,2.50844886927427,0.764628819135115,1.66215201785745,0,0,0,0,0.328014645699706,0.650756789328606,0.618246069886334,0,0.082509499920588,0,1.95018073810956,3.21367859688319,1.4500607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| ||
|short_description=p7@TAPBP | |||
}} | }} |
Latest revision as of 07:08, 18 September 2015
Short description: | p7@TAPBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TAPBP_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000434618, ENST00000456592, ENST00000458089, NM_003190, NM_172208, NM_172209_5end |
EntrezGene: | TAPBP |
HGNC: | 11566 |
UniProt: | D3YTI9Q6P1N7O15533B2ZUA4E9PGM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-16 | 42 |
defensive cell | 1.84e-15 | 48 |
phagocyte | 1.84e-15 | 48 |
granulocyte monocyte progenitor cell | 2.04e-13 | 67 |
myeloid leukocyte | 2.59e-12 | 72 |
myeloid lineage restricted progenitor cell | 5.07e-12 | 66 |
macrophage dendritic cell progenitor | 5.46e-12 | 61 |
monopoietic cell | 5.10e-11 | 59 |
monocyte | 5.10e-11 | 59 |
monoblast | 5.10e-11 | 59 |
promonocyte | 5.10e-11 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-10 | 76 |
neocortex | 6.16e-10 | 20 |
regional part of cerebral cortex | 9.28e-10 | 22 |
immune system | 1.48e-09 | 93 |
bone element | 2.00e-09 | 82 |
cerebral hemisphere | 5.41e-08 | 32 |
cerebral cortex | 7.15e-08 | 25 |
pallium | 7.15e-08 | 25 |
skeletal element | 8.46e-08 | 90 |
lateral plate mesoderm | 2.30e-07 | 203 |
skeletal system | 3.26e-07 | 100 |
telencephalon | 4.06e-07 | 34 |
mesoderm | 4.35e-07 | 315 |
mesoderm-derived structure | 4.35e-07 | 315 |
presumptive mesoderm | 4.35e-07 | 315 |
regional part of telencephalon | 5.46e-07 | 32 |
hematopoietic system | 8.40e-07 | 98 |
blood island | 8.40e-07 | 98 |