FFCP PHASE1:Hg19::chr6:31126291..31126399,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31126291..31126399,+
|short_description=p1@TCF19
|description=CAGE_peak_1_at_TCF19_5end
|association_with_transcript=0bp_to_ENST00000376255,ENST00000376257...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6941 | |EntrezGene=6941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11629 | |HGNC=11629 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y242 | |UniProt=Q9Y242 | ||
|association_with_transcript=0bp_to_ENST00000376255,ENST00000376257,NM_001077511,NM_007109,uc003nss.2,uc003nst.2_5end | |||
|cluster_id=chr6:31126291..31126399,+ | |||
|coexpression_cluster_id=C1145 | |||
|description=CAGE_peak_1_at_TCF19_5end | |||
|id=chr6:31126291..31126399,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.89e-13!254;CL:0000548!6.95e-12!679;CL:0000004!6.95e-12!679;CL:0000255!6.95e-12!679;CL:0000012!1.20e-11!682;CL:0000055!2.30e-09!180;CL:0000003!2.01e-07!722;CL:0000220!5.54e-07!246;CL:0002321!8.34e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.36e-13,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.79e-25!235;DOID:14566!1.69e-24!239;DOID:0050686!1.60e-12!137;DOID:2531!1.73e-11!51;DOID:0060083!1.73e-11!51;DOID:0050687!5.36e-11!143;DOID:305!8.49e-09!106;DOID:1240!6.01e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.15e-07;51!DOID:0060083;2.15e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.25e-25,235;DOID:14566,1.46e-24,239;DOID:0050686,1.44e-12,137;DOID:2531,1.69e-11,51;DOID:0060083,1.69e-11,51;DOID:0050687,5.23e-11,143;DOID:305,8.33e-09,106;DOID:1240,5.91e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-07;9!UBERON:0001557;2.86e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.95e-07,9 | |||
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| ||
|short_description=p1@TCF19 | |||
}} | }} |
Latest revision as of 19:52, 17 September 2015
Short description: | p1@TCF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF19_5end |
Coexpression cluster: | C1145_Hodgkin_chronic_acute_Reticulocytes_lymphoma_diffuse_Hep2 |
Association with transcript: | 0bp_to_ENST00000376255, ENST00000376257, NM_001077511, NM_007109, uc003nss.2, uc003nst.2_5end |
EntrezGene: | TCF19 |
HGNC: | 11629 |
UniProt: | Q9Y242 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.36e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.25e-25 | 235 |
disease of cellular proliferation | 1.46e-24 | 239 |
organ system cancer | 1.44e-12 | 137 |
hematologic cancer | 1.69e-11 | 51 |
immune system cancer | 1.69e-11 | 51 |
cell type cancer | 5.23e-11 | 143 |
carcinoma | 8.33e-09 | 106 |
leukemia | 5.91e-08 | 39 |