FFCP PHASE1:Hg19::chr6:25874444..25874482,-: Difference between revisions
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|id=chr6:25874444..25874482,-
|short_description=p1@SLC17A3
|description=CAGE_peak_1_at_SLC17A3_5end
|association_with_transcript=0bp_to_ENST00000397060,ENST0000050...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10786 | |EntrezGene=10786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10931 | |HGNC=10931 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z511,E9PBQ8,O00476 | |UniProt=B7Z511,E9PBQ8,O00476 | ||
|association_with_transcript=0bp_to_ENST00000397060,ENST00000503922,ENST00000506105,NM_001098486,NM_006632,uc003nfi.3,uc003nfk.3,uc011dka.1_5end | |||
|cluster_id=chr6:25874444..25874482,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_SLC17A3_5end | |||
|id=chr6:25874444..25874482,- | |||
|ontology_enrichment_celltype=CL:0000239!2.38e-15!3;CL:1000615!2.38e-15!3;CL:0002306!2.38e-15!3;CL:0000181!5.84e-09!12;CL:0000417!5.84e-09!12;CL:0000668!5.84e-09!12;CL:0000414!5.84e-09!12;CL:0000412!5.84e-09!12;CL:0000182!5.84e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.43e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.20e-12;10!UBERON:0007687;1.20e-12;10!UBERON:0003104;2.33e-07;31 | |||
|ontology_enrichment_disease=DOID:4468!8.52e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.52e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!9.84e-19!55;UBERON:0005173!9.84e-19!55;UBERON:0002417!9.14e-17!61;UBERON:0000916!9.14e-17!61;UBERON:0006853!2.38e-15!3;UBERON:0007685!2.38e-15!3;UBERON:0004134!2.38e-15!3;UBERON:0002113!2.67e-14!27;UBERON:0003918!2.67e-14!27;UBERON:0005095!2.67e-14!27;UBERON:0007687!2.67e-14!27;UBERON:0007195!2.75e-12!1;UBERON:0001301!4.81e-12!1;UBERON:0000489!5.18e-12!32;UBERON:0005177!5.27e-11!107;UBERON:0009569!2.45e-10!113;UBERON:0002107!1.25e-09!19;UBERON:0006925!1.25e-09!19;UBERON:0008836!1.25e-09!19;UBERON:0006554!1.24e-08!44;UBERON:0001008!1.97e-08!45;UBERON:0008835!2.42e-08!22;UBERON:0003894!2.42e-08!22;UBERON:0009854!5.49e-08!23;UBERON:0007499!2.32e-07!25;UBERON:0009497!2.32e-07!25;UBERON:0000015!2.32e-07!25;UBERON:0002423!2.32e-07!25;UBERON:0006235!2.32e-07!25;UBERON:0004161!2.32e-07!25;UBERON:0003103!3.80e-07!69;UBERON:0005057!4.39e-07!26;UBERON:0009856!4.39e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.75e-14;1!UBERON:0005172;9.87e-12;52!UBERON:0005173;9.87e-12;52!UBERON:0002107;1.94e-11;19!UBERON:0006925;1.94e-11;19!UBERON:0002113;4.07e-09;24!UBERON:0011143;4.07e-09;24!UBERON:0002423;9.43e-09;25!UBERON:0000489;1.40e-07;29!UBERON:0006554;2.47e-07;30!UBERON:0001008;2.47e-07;30!UBERON:0002365;2.51e-07;31!UBERON:0002330;2.51e-07;31!UBERON:0002417;3.34e-07;58!UBERON:0000916;3.34e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.16e-15,54;UBERON:0005173,6.16e-15,54;UBERON:0007195,2.41e-14,1;UBERON:0002417,2.27e-13,60;UBERON:0000916,2.27e-13,60;UBERON:0002107,1.91e-11,19;UBERON:0006925,1.91e-11,19;UBERON:0008836,1.91e-11,19;UBERON:0008835,6.41e-10,22;UBERON:0003894,6.41e-10,22;UBERON:0005177,1.08e-09,101;UBERON:0009854,1.69e-09,23;UBERON:0007499,9.33e-09,25;UBERON:0009497,9.33e-09,25;UBERON:0000015,9.33e-09,25;UBERON:0002423,9.33e-09,25;UBERON:0006235,9.33e-09,25;UBERON:0004161,9.33e-09,25;UBERON:0009569,1.21e-08,112;UBERON:0002113,1.99e-08,26;UBERON:0003918,1.99e-08,26;UBERON:0009856,1.99e-08,26;UBERON:0011143,1.99e-08,26;UBERON:0005095,1.99e-08,26;UBERON:0007687,1.99e-08,26;UBERON:0000489,4.23e-07,31;UBERON:0002365,4.23e-07,31;UBERON:0002330,4.23e-07,31 | |||
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|short_description=p1@SLC17A3 | |||
}} | }} |
Latest revision as of 08:07, 17 September 2015
Short description: | p1@SLC17A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC17A3_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000397060, ENST00000503922, ENST00000506105, NM_001098486, NM_006632, uc003nfi.3, uc003nfk.3, uc011dka.1_5end |
EntrezGene: | SLC17A3 |
HGNC: | 10931 |
UniProt: | B7Z511E9PBQ8O00476 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.43e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 6.16e-15 | 54 |
abdominal segment element | 6.16e-15 | 54 |
stroma of bone marrow | 2.41e-14 | 1 |
abdominal segment of trunk | 2.27e-13 | 60 |
abdomen | 2.27e-13 | 60 |
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
hepatic diverticulum | 6.41e-10 | 22 |
liver primordium | 6.41e-10 | 22 |
trunk region element | 1.08e-09 | 101 |
digestive tract diverticulum | 1.69e-09 | 23 |
epithelial sac | 9.33e-09 | 25 |
epithelium of foregut-midgut junction | 9.33e-09 | 25 |
anatomical boundary | 9.33e-09 | 25 |
hepatobiliary system | 9.33e-09 | 25 |
foregut-midgut junction | 9.33e-09 | 25 |
septum transversum | 9.33e-09 | 25 |
subdivision of trunk | 1.21e-08 | 112 |
kidney | 1.99e-08 | 26 |
kidney mesenchyme | 1.99e-08 | 26 |
sac | 1.99e-08 | 26 |
upper urinary tract | 1.99e-08 | 26 |
kidney rudiment | 1.99e-08 | 26 |
kidney field | 1.99e-08 | 26 |
cavitated compound organ | 4.23e-07 | 31 |
exocrine gland | 4.23e-07 | 31 |
exocrine system | 4.23e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.52e-08 | 2 |