FFCP PHASE1:Hg19::chr6:25042231..25042263,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:25042231..25042263,-
|short_description=p7@FAM65B
|description=CAGE_peak_7_at_FAM65B_5end
|association_with_transcript=0bp_to_ENST00000510784_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9750 | |EntrezGene=9750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13872 | |HGNC=13872 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6U4 | |UniProt=B7Z6U4 | ||
|association_with_transcript=0bp_to_ENST00000510784_5end | |||
|cluster_id=chr6:25042231..25042263,- | |||
|coexpression_cluster_id=C900 | |||
|description=CAGE_peak_7_at_FAM65B_5end | |||
|id=chr6:25042231..25042263,- | |||
|ontology_enrichment_celltype=CL:0000037!1.61e-26!172;CL:0000566!1.61e-26!172;CL:0000542!4.79e-26!53;CL:0000051!4.79e-26!53;CL:0000838!1.59e-25!52;CL:0000988!1.38e-23!182;CL:0002032!1.57e-22!165;CL:0000837!1.57e-22!165;CL:0000791!6.62e-22!18;CL:0000789!6.62e-22!18;CL:0002420!6.62e-22!18;CL:0002419!6.62e-22!18;CL:0000790!6.62e-22!18;CL:0000084!3.22e-21!25;CL:0000827!3.22e-21!25;CL:0000738!2.09e-19!140;CL:0000625!3.24e-14!11;CL:0002031!1.45e-12!124;CL:0002087!3.60e-12!119;CL:0000624!1.09e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.46e-31;18!CL:0000789;3.46e-31;18!CL:0002419;3.46e-31;18!CL:0000084;3.16e-29;25!CL:0000625;6.61e-22;11!CL:0000542;8.80e-15;53!CL:0000624;4.78e-13;6!CL:0000097;3.32e-09;5!CL:0000898;2.67e-07;3!CL:0000623;4.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.58e-31,18;CL:0000789,3.58e-31,18;CL:0002420,3.58e-31,18;CL:0002419,3.58e-31,18;CL:0000790,3.58e-31,18;CL:0000084,3.49e-29,25;CL:0000827,3.49e-29,25;CL:0000037,2.91e-28,168;CL:0000838,1.25e-26,52;CL:0000988,5.90e-26,177;CL:0000542,5.93e-26,53;CL:0000051,5.93e-26,53;CL:0002032,9.50e-23,161;CL:0000837,9.50e-23,161;CL:0000625,6.51e-22,11;CL:0000738,2.63e-19,136;CL:0002031,9.96e-14,120;CL:0000624,5.05e-13,6;CL:0002087,6.09e-13,115;CL:0000097,3.92e-09,5;CL:0002028,3.92e-09,5;CL:0000898,2.70e-07,3;CL:0000623,3.67e-07,3;CL:0000825,3.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.46e-31;18!CL:0000051;8.80e-15;53 | |||
|ontology_enrichment_disease=DOID:2531!5.90e-07!51;DOID:0060083!5.90e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.41e-08,39;DOID:2531,4.08e-07,51;DOID:0060083,4.08e-07,51;DOID:8692,7.26e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-15!115;UBERON:0000178!5.11e-10!15;UBERON:0000179!5.11e-10!15;UBERON:0000463!5.11e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-16;15!UBERON:0000179;6.20e-16;15!UBERON:0000463;6.20e-16;15!UBERON:0002390;9.31e-14;32!UBERON:0002193;3.04e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.95e-16,15;UBERON:0000179,5.95e-16,15;UBERON:0000463,5.95e-16,15;UBERON:0002193,1.54e-07,108;UBERON:0002390,1.73e-07,98;UBERON:0003061,1.73e-07,98;UBERON:0004177,6.35e-07,7;UBERON:0005057,6.35e-07,7 | |||
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| ||
|short_description=p7@FAM65B | |||
}} | }} |
Latest revision as of 07:23, 17 September 2015
Short description: | p7@FAM65B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM65B_5end |
Coexpression cluster: | C900_CD4_thymus_Hodgkin_CD8_CD34_chronic_CD133 |
Association with transcript: | 0bp_to_ENST00000510784_5end |
EntrezGene: | FAM65B |
HGNC: | 13872 |
UniProt: | B7Z6U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.58e-31 | 18 |
alpha-beta T cell | 3.58e-31 | 18 |
immature T cell | 3.58e-31 | 18 |
mature T cell | 3.58e-31 | 18 |
immature alpha-beta T cell | 3.58e-31 | 18 |
T cell | 3.49e-29 | 25 |
pro-T cell | 3.49e-29 | 25 |
hematopoietic stem cell | 2.91e-28 | 168 |
lymphoid lineage restricted progenitor cell | 1.25e-26 | 52 |
hematopoietic cell | 5.90e-26 | 177 |
lymphocyte | 5.93e-26 | 53 |
common lymphoid progenitor | 5.93e-26 | 53 |
hematopoietic oligopotent progenitor cell | 9.50e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.50e-23 | 161 |
CD8-positive, alpha-beta T cell | 6.51e-22 | 11 |
leukocyte | 2.63e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 9.96e-14 | 120 |
CD4-positive, alpha-beta T cell | 5.05e-13 | 6 |
nongranular leukocyte | 6.09e-13 | 115 |
mast cell | 3.92e-09 | 5 |
basophil mast progenitor cell | 3.92e-09 | 5 |
naive T cell | 2.70e-07 | 3 |
natural killer cell | 3.67e-07 | 3 |
pro-NK cell | 3.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.95e-16 | 15 |
haemolymphatic fluid | 5.95e-16 | 15 |
organism substance | 5.95e-16 | 15 |
hemolymphoid system | 1.54e-07 | 108 |
hematopoietic system | 1.73e-07 | 98 |
blood island | 1.73e-07 | 98 |
hemopoietic organ | 6.35e-07 | 7 |
immune organ | 6.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.41e-08 | 39 |
hematologic cancer | 4.08e-07 | 51 |
immune system cancer | 4.08e-07 | 51 |
myeloid leukemia | 7.26e-07 | 31 |