FFCP PHASE1:Hg19::chr6:24775648..24775710,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:24775648..24775710,+
|short_description=p2@GMNN
|description=CAGE_peak_2_at_GMNN_5end
|association_with_transcript=0bp_to_ENST00000476555_5end
|EntrezGene...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51053 | |EntrezGene=51053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17493 | |HGNC=17493 | ||
|TSSclassifier=strong | |||
|UniProt=C9K0U5 | |UniProt=C9K0U5 | ||
|association_with_transcript=0bp_to_ENST00000476555_5end | |||
|cluster_id=chr6:24775648..24775710,+ | |||
|description=CAGE_peak_2_at_GMNN_5end | |||
|id=chr6:24775648..24775710,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.10e-07;29 | |||
|ontology_enrichment_disease=DOID:162!1.53e-26!235;DOID:14566!1.19e-25!239;DOID:0050687!6.29e-19!143;DOID:305!2.26e-16!106;DOID:0050686!1.17e-11!137;DOID:2531!2.66e-08!51;DOID:0060083!2.66e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.39e-23,235;DOID:14566,5.44e-22,239;DOID:0050687,1.23e-18,143;DOID:305,8.18e-18,106;DOID:0050686,5.53e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.85e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.84e-10;9!UBERON:0001557;4.84e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.78e-10,9;UBERON:0001557,3.50e-07,19 | |||
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| ||
|short_description=p2@GMNN | |||
}} | }} |
Latest revision as of 06:49, 17 September 2015
Short description: | p2@GMNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GMNN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476555_5end |
EntrezGene: | GMNN |
HGNC: | 17493 |
UniProt: | C9K0U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.78e-10 | 9 |
upper respiratory tract | 3.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.39e-23 | 235 |
disease of cellular proliferation | 5.44e-22 | 239 |
cell type cancer | 1.23e-18 | 143 |
carcinoma | 8.18e-18 | 106 |
organ system cancer | 5.53e-10 | 137 |