FFCP PHASE1:Hg19::chr6:168195978..168195989,+: Difference between revisions
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|id=chr6:168195978..168195989,+
|short_description=p3@LOC441179
|description=CAGE_peak_3_at_LOC441179_5end
|association_with_transcript=-220bp_to_AK125190_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=441179 | |EntrezGene=441179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZUY9 | |UniProt=Q6ZUY9 | ||
|association_with_transcript=-220bp_to_AK125190_5end | |||
|cluster_id=chr6:168195978..168195989,+ | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_3_at_LOC441179_5end | |||
|id=chr6:168195978..168195989,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.19e-26!24;CL:0005020!2.44e-22!6;CL:0002138!2.44e-22!6;CL:0005022!2.44e-22!6;CL:0000115!1.11e-17!35;CL:0002078!8.65e-14!44;CL:0002144!3.13e-12!3;CL:0000071!2.99e-11!18;CL:0002546!2.99e-11!18;CL:0000213!2.46e-10!57;CL:0000215!2.46e-10!57 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.14e-49;6!CL:0002144;5.00e-45;3!CL:0002139;1.08e-34;24!CL:0000115;1.36e-19;36!CL:0002078;1.25e-15;45!CL:0000213;5.71e-09;58!CL:0000215;5.71e-09;58!CL:0000071;2.09e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.05e-49,6;CL:0002138,1.05e-49,6;CL:0005022,1.05e-49,6;CL:0002144,5.00e-45,3;CL:0002139,1.05e-34,24;CL:0000115,2.31e-23,36;CL:0002078,8.25e-19,45;CL:0000213,1.02e-14,58;CL:0000215,1.02e-14,58;CL:0000071,2.09e-08,18;CL:0002546,2.09e-08,18;CL:0000222,2.87e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.14e-49;6!CL:0002546;2.09e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!8.14e-17!8;UBERON:0004536!8.14e-17!8;UBERON:0006558!8.14e-17!8;UBERON:0002465!1.72e-13!10;UBERON:0001915!3.13e-12!3;UBERON:0001982!3.13e-12!3;UBERON:0001986!2.99e-11!18;UBERON:0004638!2.99e-11!18;UBERON:0004852!2.99e-11!18;UBERON:0000487!3.59e-09!22;UBERON:0000055!2.66e-08!69;UBERON:0006914!4.80e-08!25;UBERON:0002049!4.44e-07!79;UBERON:0007798!4.44e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.00e-45;3!UBERON:0001915;5.00e-45;3!UBERON:0001982;5.00e-45;3!UBERON:0001473;1.61e-37;8!UBERON:0004536;1.61e-37;8!UBERON:0006558;1.61e-37;8!UBERON:0002465;3.23e-30;10!UBERON:0001723;3.06e-12;3!UBERON:0001033;3.06e-12;3!UBERON:0002405;9.80e-12;27!UBERON:0000055;3.64e-10;65!UBERON:0004638;2.09e-08;18!UBERON:0001986;2.09e-08;18!UBERON:0004852;2.09e-08;18!UBERON:0002193;1.82e-07;42!UBERON:0000487;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.00e-45,3;UBERON:0001915,5.00e-45,3;UBERON:0001982,5.00e-45,3;UBERON:0001473,1.51e-37,8;UBERON:0004536,1.51e-37,8;UBERON:0006558,1.51e-37,8;UBERON:0002465,3.07e-30,10;UBERON:0000055,1.26e-12,68;UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0002049,4.58e-11,78;UBERON:0007798,4.58e-11,78;UBERON:0004638,2.09e-08,18;UBERON:0001986,2.09e-08,18;UBERON:0004852,2.09e-08,18;UBERON:0004535,4.95e-08,109;UBERON:0001009,7.95e-08,112;UBERON:0000487,4.79e-07,22 | |||
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|short_description=p3@LOC441179 | |||
}} | }} |
Latest revision as of 21:44, 16 September 2015
Short description: | p3@LOC441179 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC441179_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -220bp_to_AK125190_5end |
EntrezGene: | LOC441179 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.05e-49 | 6 |
endothelial cell of lymphatic vessel | 1.05e-49 | 6 |
vascular lymphangioblast | 1.05e-49 | 6 |
capillary endothelial cell | 5.00e-45 | 3 |
endothelial cell of vascular tree | 1.05e-34 | 24 |
endothelial cell | 2.31e-23 | 36 |
meso-epithelial cell | 8.25e-19 | 45 |
lining cell | 1.02e-14 | 58 |
barrier cell | 1.02e-14 | 58 |
blood vessel endothelial cell | 2.09e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.09e-08 | 18 |
mesodermal cell | 2.87e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.00e-45 | 3 |
endothelium of capillary | 5.00e-45 | 3 |
capillary | 5.00e-45 | 3 |
lymphatic vessel | 1.51e-37 | 8 |
lymph vasculature | 1.51e-37 | 8 |
lymphatic part of lymphoid system | 1.51e-37 | 8 |
lymphoid system | 3.07e-30 | 10 |
vessel | 1.26e-12 | 68 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
vasculature | 4.58e-11 | 78 |
vascular system | 4.58e-11 | 78 |
blood vessel endothelium | 2.09e-08 | 18 |
endothelium | 2.09e-08 | 18 |
cardiovascular system endothelium | 2.09e-08 | 18 |
cardiovascular system | 4.95e-08 | 109 |
circulatory system | 7.95e-08 | 112 |
simple squamous epithelium | 4.79e-07 | 22 |