FFCP PHASE1:Hg19::chr6:160679837..160679844,-: Difference between revisions
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|id=chr6:160679837..160679844,-
|short_description=p3@SLC22A2
|description=CAGE_peak_3_at_SLC22A2_5end
|association_with_transcript=-16bp_to_ENST00000474259_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6582 | |EntrezGene=6582 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10966 | |HGNC=10966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000474259_5end | |||
|cluster_id=chr6:160679837..160679844,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_SLC22A2_5end | |||
|id=chr6:160679837..160679844,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.54e-27;10!UBERON:0007687;2.54e-27;10!UBERON:0003104;6.37e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002360!3.93e-22!2;UBERON:0000094!3.93e-22!2;UBERON:0007645!3.93e-22!2;UBERON:0007023!2.06e-13!115;UBERON:0002146!5.62e-12!1;UBERON:0005623!5.62e-12!1;UBERON:0002363!7.76e-12!1;UBERON:0007647!7.76e-12!1;UBERON:0010115!7.76e-12!1;UBERON:0003112!8.64e-12!1;UBERON:0000032!8.64e-12!1;UBERON:0005253!8.64e-12!1;UBERON:0003128!8.64e-12!1;UBERON:0002241!8.64e-12!1;UBERON:0001703!8.64e-12!1;UBERON:0004761!8.64e-12!1;UBERON:0009617!8.64e-12!1;UBERON:0001882!1.07e-11!1;UBERON:0005403!1.07e-11!1;UBERON:0001282!1.19e-11!1;UBERON:0009842!1.19e-11!1;UBERON:0003704!1.19e-11!1;UBERON:0001171!1.19e-11!1;UBERON:0001172!1.19e-11!1;UBERON:0002902!1.63e-11!1;UBERON:0009899!1.63e-11!1;UBERON:0003075!1.35e-10!86;UBERON:0007284!1.35e-10!86;UBERON:0005743!2.02e-10!86;UBERON:0002346!4.53e-10!90;UBERON:0000073!2.51e-09!94;UBERON:0001016!2.51e-09!94;UBERON:0001017!7.06e-09!82;UBERON:0002342!2.25e-07!14;UBERON:0005062!2.25e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.08e-12;24!UBERON:0011143;4.08e-12;24!UBERON:0000489;3.17e-10;29!UBERON:0006554;6.37e-10;30!UBERON:0001008;6.37e-10;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.77e-11,26;UBERON:0003918,2.77e-11,26;UBERON:0011143,2.77e-11,26;UBERON:0005095,2.77e-11,26;UBERON:0007687,2.77e-11,26;UBERON:0000489,1.20e-09,31;UBERON:0006554,1.00e-06,47 | |||
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|short_description=p3@SLC22A2 | |||
}} | }} |
Latest revision as of 16:07, 16 September 2015
Short description: | p3@SLC22A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC22A2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -16bp_to_ENST00000474259_5end |
EntrezGene: | SLC22A2 |
HGNC: | 10966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.77e-11 | 26 |
kidney mesenchyme | 2.77e-11 | 26 |
upper urinary tract | 2.77e-11 | 26 |
kidney rudiment | 2.77e-11 | 26 |
kidney field | 2.77e-11 | 26 |
cavitated compound organ | 1.20e-09 | 31 |
urinary system structure | 1.00e-06 | 47 |