FFCP PHASE1:Hg19::chr6:143096057..143096071,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:143096057..143096071,-
|short_description=p4@HIVEP2
|description=CAGE_peak_4_at_HIVEP2_5end
|association_with_transcript=-75bp_to_X65644_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3097 | |EntrezGene=3097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4921 | |HGNC=4921 | ||
|TSSclassifier=strong | |||
|UniProt=P31629 | |UniProt=P31629 | ||
|association_with_transcript=-75bp_to_X65644_5end | |||
|cluster_id=chr6:143096057..143096071,- | |||
|description=CAGE_peak_4_at_HIVEP2_5end | |||
|id=chr6:143096057..143096071,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-12;33!CL:0002057;3.37e-12;33!CL:0000473;3.41e-09;39!CL:0000234;3.41e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.28e-10,42;CL:0002057,6.28e-10,42;CL:0000473,9.76e-09,48;CL:0000234,9.76e-09,48;CL:0002194,4.63e-07,59;CL:0000576,4.63e-07,59;CL:0000040,4.63e-07,59;CL:0000559,4.63e-07,59;CL:0002009,7.64e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.66e-11!32;UBERON:0002020!7.54e-11!34;UBERON:0003528!7.54e-11!34;UBERON:0001950!1.73e-10!20;UBERON:0001893!2.02e-10!34;UBERON:0002791!4.33e-10!33;UBERON:0002616!3.97e-09!59;UBERON:0002619!4.06e-09!22;UBERON:0001049!7.00e-09!57;UBERON:0005068!7.00e-09!57;UBERON:0006241!7.00e-09!57;UBERON:0007135!7.00e-09!57;UBERON:0000956!1.97e-08!25;UBERON:0000203!1.97e-08!25;UBERON:0002780!3.17e-08!41;UBERON:0001890!3.17e-08!41;UBERON:0006240!3.17e-08!41;UBERON:0000955!6.78e-08!69;UBERON:0006238!6.78e-08!69;UBERON:0003080!7.17e-08!42;UBERON:0007023!6.65e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;1.71e-17;6!UBERON:0002771;8.28e-14;2!UBERON:0002702;1.21e-13;2!UBERON:0001950;2.70e-11;20!UBERON:0002619;2.26e-10;22!UBERON:0001870;1.53e-09;3!UBERON:0002114;1.53e-09;2!UBERON:0000956;2.99e-09;25!UBERON:0000203;2.99e-09;25!UBERON:0002791;1.04e-07;32!UBERON:0001869;1.04e-07;32!UBERON:0001893;2.55e-07;34!UBERON:0003528;6.29e-07;34!UBERON:0002020;6.29e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.57e-17,6;UBERON:0002771,8.28e-14,2;UBERON:0002702,1.07e-13,2;UBERON:0001950,2.61e-11,20;UBERON:0002619,2.19e-10,22;UBERON:0001870,1.41e-09,3;UBERON:0002114,1.81e-09,2;UBERON:0000956,2.91e-09,25;UBERON:0000203,2.91e-09,25;UBERON:0002791,1.98e-07,32;UBERON:0001869,1.98e-07,32;UBERON:0003528,4.88e-07,34;UBERON:0002020,4.88e-07,34;UBERON:0001893,4.88e-07,34 | |||
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| ||
|short_description=p4@HIVEP2 | |||
}} | }} |
Latest revision as of 17:56, 15 September 2015
Short description: | p4@HIVEP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HIVEP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_X65644_5end |
EntrezGene: | HIVEP2 |
HGNC: | 4921 |
UniProt: | P31629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.28e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.28e-10 | 42 |
defensive cell | 9.76e-09 | 48 |
phagocyte | 9.76e-09 | 48 |
monopoietic cell | 4.63e-07 | 59 |
monocyte | 4.63e-07 | 59 |
monoblast | 4.63e-07 | 59 |
promonocyte | 4.63e-07 | 59 |
macrophage dendritic cell progenitor | 7.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
gyrus | 1.57e-17 | 6 |
middle temporal gyrus | 8.28e-14 | 2 |
middle frontal gyrus | 1.07e-13 | 2 |
neocortex | 2.61e-11 | 20 |
regional part of cerebral cortex | 2.19e-10 | 22 |
frontal cortex | 1.41e-09 | 3 |
duodenum | 1.81e-09 | 2 |
cerebral cortex | 2.91e-09 | 25 |
pallium | 2.91e-09 | 25 |
regional part of telencephalon | 1.98e-07 | 32 |
cerebral hemisphere | 1.98e-07 | 32 |
brain grey matter | 4.88e-07 | 34 |
gray matter | 4.88e-07 | 34 |
telencephalon | 4.88e-07 | 34 |