FFCP PHASE1:Hg19::chr6:135502472..135502489,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:135502472..135502489,+
|short_description=p3@MYB
|description=CAGE_peak_3_at_MYB_5end
|association_with_transcript=6bp_to_ENST00000367814_5end
|EntrezGene...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4602 | |EntrezGene=4602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7545 | |HGNC=7545 | ||
|TSSclassifier=strong | |||
|UniProt=P10242 | |UniProt=P10242 | ||
|association_with_transcript=6bp_to_ENST00000367814_5end | |||
|cluster_id=chr6:135502472..135502489,+ | |||
|coexpression_cluster_id=C4563 | |||
|description=CAGE_peak_3_at_MYB_5end | |||
|id=chr6:135502472..135502489,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.02e-17!172;CL:0000566!3.02e-17!172;CL:0000988!3.19e-17!182;CL:0002032!1.00e-14!165;CL:0000837!1.00e-14!165;CL:0000542!1.44e-09!53;CL:0000051!1.44e-09!53;CL:0000838!4.88e-09!52 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.02e-12;5!CL:0000763;4.78e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.36e-31,177;CL:0000037,3.67e-29,168;CL:0002032,1.07e-25,161;CL:0000837,1.07e-25,161;CL:0000763,2.52e-23,108;CL:0000049,2.52e-23,108;CL:0000097,8.30e-12,5;CL:0002028,8.30e-12,5;CL:0000784,9.78e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000049;2.38e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!6.82e-43!51;DOID:0060083!6.82e-43!51;DOID:1240!2.84e-38!39;DOID:8692!1.38e-31!31;DOID:0050686!1.52e-21!137;DOID:162!4.69e-14!235;DOID:14566!3.72e-13!239;DOID:1036!2.29e-09!8;DOID:0060058!1.41e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.19e-64;31!DOID:1240;7.96e-61;39!DOID:2531;3.34e-46;51!DOID:0060083;3.34e-46;51!DOID:1036;2.18e-18;8!DOID:5093;3.96e-09;4!DOID:1612;3.96e-09;4!DOID:0050686;1.12e-07;137!DOID:0060058;5.18e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.93e-78,39;DOID:2531,2.22e-77,51;DOID:0060083,2.22e-77,51;DOID:8692,1.67e-66,31;DOID:0050686,1.83e-29,137;DOID:1036,2.37e-18,8;DOID:162,1.24e-13,235;DOID:14566,4.58e-13,239;DOID:5093,4.00e-09,4;DOID:1612,4.00e-09,4;DOID:0060058,5.21e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@MYB | |||
}} | }} |
Latest revision as of 23:00, 24 September 2015
Short description: | p3@MYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYB_5end |
Coexpression cluster: | C4563_non_Mast_chronic_acute_granulocyte_myelodysplastic_CD34 |
Association with transcript: | 6bp_to_ENST00000367814_5end |
EntrezGene: | MYB |
HGNC: | 7545 |
UniProt: | P10242 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.36e-31 | 177 |
hematopoietic stem cell | 3.67e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.07e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-25 | 161 |
myeloid cell | 2.52e-23 | 108 |
common myeloid progenitor | 2.52e-23 | 108 |
mast cell | 8.30e-12 | 5 |
basophil mast progenitor cell | 8.30e-12 | 5 |
plasmacytoid dendritic cell | 9.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.93e-78 | 39 |
hematologic cancer | 2.22e-77 | 51 |
immune system cancer | 2.22e-77 | 51 |
myeloid leukemia | 1.67e-66 | 31 |
organ system cancer | 1.83e-29 | 137 |
chronic leukemia | 2.37e-18 | 8 |
cancer | 1.24e-13 | 235 |
disease of cellular proliferation | 4.58e-13 | 239 |
thoracic cancer | 4.00e-09 | 4 |
breast cancer | 4.00e-09 | 4 |
lymphoma | 5.21e-07 | 10 |