FFCP PHASE1:Hg19::chr6:132272504..132272519,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:132272504..132272519,-
|short_description=p1@CTGF
|description=CAGE_peak_1_at_CTGF_5end
|association_with_transcript=0bp_to_ENST00000367976,NM_001901,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt=P29279,Q5M8T4 | |UniProt=P29279,Q5M8T4 | ||
|association_with_transcript=0bp_to_ENST00000367976,NM_001901,uc003qcz.2_5end | |||
|cluster_id=chr6:132272504..132272519,- | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_1_at_CTGF_5end | |||
|id=chr6:132272504..132272519,- | |||
|ontology_enrichment_celltype=CL:0000055!1.87e-30!180;CL:0000222!8.59e-27!119;CL:0000220!1.27e-19!246;CL:0002321!2.03e-19!248;CL:0000183!3.62e-15!59;CL:0000680!9.09e-15!57;CL:0000056!9.09e-15!57;CL:0000355!9.09e-15!57;CL:0000057!1.30e-14!75;CL:0000187!1.52e-14!54;CL:0000192!3.22e-14!42;CL:0000514!3.22e-14!42;CL:0000393!1.13e-13!60;CL:0000211!1.13e-13!60;CL:0000359!4.17e-13!32;CL:0002139!1.58e-12!24;CL:0002078!3.26e-12!44;CL:0000115!4.44e-12!35;CL:0000213!1.33e-11!57;CL:0000215!1.33e-11!57;CL:0000071!6.05e-10!18;CL:0002546!6.05e-10!18;CL:0002494!7.61e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.42e-12;24!CL:0000359;1.78e-12;32!CL:0000115;7.88e-11;36!CL:0000192;2.85e-10;43!CL:0000071;5.57e-10;18!CL:0002078;8.88e-09;45!CL:0000187;1.92e-08;55!CL:0000213;2.00e-07;58!CL:0000215;2.00e-07;58!CL:0002494;7.24e-07;16!CL:0000393;9.12e-07;61!CL:0000211;9.12e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.94e-27,121;CL:0002321,1.63e-19,250;CL:0000057,4.31e-15,76;CL:0000680,9.10e-15,58;CL:0000056,9.10e-15,58;CL:0000355,9.10e-15,58;CL:0000187,1.55e-14,55;CL:0000192,3.61e-14,43;CL:0000514,3.61e-14,43;CL:0000393,1.10e-13,61;CL:0000211,1.10e-13,61;CL:0000359,3.72e-13,32;CL:0002078,8.61e-13,45;CL:0000115,1.11e-12,36;CL:0002139,1.42e-12,24;CL:0000213,3.88e-12,58;CL:0000215,3.88e-12,58;CL:0000071,5.57e-10,18;CL:0002546,5.57e-10,18;CL:0002494,7.22e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-10;43!CL:0002546;5.57e-10;18!CL:0000355;6.73e-08;58!CL:0000222;2.01e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.22e-32!118;UBERON:0002049!3.36e-32!79;UBERON:0007798!3.36e-32!79;UBERON:0004872!5.04e-29!84;UBERON:0000055!9.33e-28!69;UBERON:0001981!1.71e-25!60;UBERON:0007500!1.71e-25!60;UBERON:0004537!1.71e-25!60;UBERON:0006965!1.71e-25!60;UBERON:0004535!6.50e-23!110;UBERON:0001009!1.94e-22!113;UBERON:0000490!2.03e-22!138;UBERON:0000119!2.74e-22!312;UBERON:0000477!1.36e-21!286;UBERON:0000483!1.99e-21!309;UBERON:0000475!1.11e-20!365;UBERON:0005256!1.22e-20!143;UBERON:0002100!3.77e-20!216;UBERON:0001637!1.94e-19!42;UBERON:0003509!1.94e-19!42;UBERON:0004572!1.94e-19!42;UBERON:0000468!1.92e-18!659;UBERON:0004111!3.38e-18!241;UBERON:0000481!2.46e-16!347;UBERON:0000025!1.21e-15!194;UBERON:0004573!1.59e-15!33;UBERON:0004571!1.59e-15!33;UBERON:0000914!5.50e-15!83;UBERON:0002329!5.50e-15!83;UBERON:0003077!5.50e-15!83;UBERON:0003059!5.50e-15!83;UBERON:0007282!5.50e-15!83;UBERON:0009618!5.50e-15!83;UBERON:0007285!5.50e-15!83;UBERON:0003104!5.70e-15!238;UBERON:0009142!5.70e-15!238;UBERON:0000467!9.98e-15!625;UBERON:0002385!1.58e-14!63;UBERON:0001015!1.58e-14!63;UBERON:0000383!1.58e-14!63;UBERON:0001134!1.94e-14!61;UBERON:0002036!1.94e-14!61;UBERON:0003082!1.94e-14!61;UBERON:0000480!2.10e-14!626;UBERON:0004290!1.23e-13!70;UBERON:0000486!3.33e-13!82;UBERON:0000947!5.27e-11!21;UBERON:0010191!5.27e-11!21;UBERON:0000487!7.99e-11!22;UBERON:0006914!1.22e-10!25;UBERON:0001986!6.05e-10!18;UBERON:0004638!6.05e-10!18;UBERON:0004852!6.05e-10!18;UBERON:0009569!1.58e-09!113;UBERON:0000922!4.08e-09!612;UBERON:0002050!5.34e-09!605;UBERON:0005423!5.34e-09!605;UBERON:0000923!6.83e-09!604;UBERON:0005291!6.83e-09!604;UBERON:0006598!6.83e-09!604;UBERON:0002532!6.83e-09!604;UBERON:0000926!2.06e-08!448;UBERON:0004120!2.06e-08!448;UBERON:0006603!2.06e-08!448;UBERON:0003103!1.07e-07!69;UBERON:0001048!1.91e-07!168;UBERON:0000948!1.98e-07!24;UBERON:0005498!1.98e-07!24;UBERON:0004140!1.98e-07!24;UBERON:0009881!1.98e-07!24;UBERON:0004141!1.98e-07!24;UBERON:0003084!1.98e-07!24;UBERON:0007005!1.98e-07!24;UBERON:0004139!1.98e-07!24;UBERON:0004291!1.98e-07!24;UBERON:0000466!2.28e-07!126;UBERON:0002417!2.47e-07!61;UBERON:0000916!2.47e-07!61;UBERON:0007100!8.28e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.49e-15;42!UBERON:0003509;6.49e-15;42!UBERON:0004572;6.49e-15;42!UBERON:0004573;2.59e-14;33!UBERON:0004571;2.59e-14;33!UBERON:0007500;9.54e-14;56!UBERON:0001981;9.54e-14;56!UBERON:0004537;9.54e-14;56!UBERON:0000055;3.71e-13;65!UBERON:0002049;1.04e-12;75!UBERON:0007798;1.04e-12;75!UBERON:0003914;3.74e-12;74!UBERON:0000947;4.81e-11;21!UBERON:0010191;4.81e-11;21!UBERON:0000487;7.31e-11;22!UBERON:0006914;1.12e-10;25!UBERON:0004638;5.57e-10;18!UBERON:0001986;5.57e-10;18!UBERON:0004852;5.57e-10;18!UBERON:0000490;5.73e-08;33!UBERON:0000025;1.82e-07;93!UBERON:0001009;4.52e-07;112!UBERON:0004535;5.97e-07;109!UBERON:0000948;6.47e-07;22 | |||
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| ||
|short_description=p1@CTGF | |||
}} | }} |
Latest revision as of 19:12, 24 September 2015
Short description: | p1@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000367976, NM_001901, uc003qcz.2_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | P29279Q5M8T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.94e-27 | 121 |
embryonic cell | 1.63e-19 | 250 |
fibroblast | 4.31e-15 | 76 |
muscle precursor cell | 9.10e-15 | 58 |
myoblast | 9.10e-15 | 58 |
multi-potent skeletal muscle stem cell | 9.10e-15 | 58 |
muscle cell | 1.55e-14 | 55 |
smooth muscle cell | 3.61e-14 | 43 |
smooth muscle myoblast | 3.61e-14 | 43 |
electrically responsive cell | 1.10e-13 | 61 |
electrically active cell | 1.10e-13 | 61 |
vascular associated smooth muscle cell | 3.72e-13 | 32 |
meso-epithelial cell | 8.61e-13 | 45 |
endothelial cell | 1.11e-12 | 36 |
endothelial cell of vascular tree | 1.42e-12 | 24 |
lining cell | 3.88e-12 | 58 |
barrier cell | 3.88e-12 | 58 |
blood vessel endothelial cell | 5.57e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.57e-10 | 18 |
cardiocyte | 7.22e-07 | 16 |