FFCP PHASE1:Hg19::chr6:1312155..1312187,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:1312155..1312187,+
|short_description=p2@FOXQ1
|description=CAGE_peak_2_at_FOXQ1_5end
|association_with_transcript=-487bp_to_ENST00000296839,NM_033260,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94234 | |EntrezGene=94234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20951 | |HGNC=20951 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C009 | |UniProt=Q9C009 | ||
|association_with_transcript=-487bp_to_ENST00000296839,NM_033260,uc003mtl.3_5end | |||
|cluster_id=chr6:1312155..1312187,+ | |||
|description=CAGE_peak_2_at_FOXQ1_5end | |||
|id=chr6:1312155..1312187,+ | |||
|ontology_enrichment_celltype=CL:0000223!7.54e-14!59;CL:0002076!2.84e-12!43;CL:0000066!2.07e-11!254;CL:0002251!1.19e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;5.59e-09;20!CL:0002076;4.13e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.43e-14,253;CL:0000223,4.93e-14,58;CL:0002076,2.16e-11,42;CL:0002251,7.86e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.22e-11;30!UBERON:0009497;1.21e-10;13!UBERON:0004161;2.23e-08;11!CL:0000223;2.41e-08;58 | |||
|ontology_enrichment_disease=DOID:305!8.43e-11!106;DOID:1749!2.68e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;1.06e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.61e-14,106;DOID:0050687,5.25e-10,143;DOID:299,7.42e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.94e-19!169;UBERON:0000925!1.94e-19!169;UBERON:0006595!1.94e-19!169;UBERON:0001007!7.13e-18!155;UBERON:0001555!7.13e-18!155;UBERON:0007026!7.13e-18!155;UBERON:0000062!1.40e-16!511;UBERON:0000153!5.22e-14!129;UBERON:0007811!5.22e-14!129;UBERON:0000475!7.43e-14!365;UBERON:0000033!8.59e-14!123;UBERON:0000481!9.55e-14!347;UBERON:0000077!3.01e-13!130;UBERON:0004921!2.06e-12!129;UBERON:0004185!2.06e-12!129;UBERON:0001444!4.20e-12!48;UBERON:0000922!7.51e-11!612;UBERON:0007023!8.57e-11!115;UBERON:0000468!2.37e-10!659;UBERON:0000467!3.64e-10!625;UBERON:0000480!4.91e-10!626;UBERON:0000161!6.83e-10!35;UBERON:0000923!7.97e-10!604;UBERON:0005291!7.97e-10!604;UBERON:0006598!7.97e-10!604;UBERON:0002532!7.97e-10!604;UBERON:0002050!1.07e-09!605;UBERON:0005423!1.07e-09!605;UBERON:0005911!1.07e-09!82;UBERON:0000165!1.28e-09!28;UBERON:0000930!1.28e-09!28;UBERON:0001041!3.90e-09!98;UBERON:0000924!7.34e-09!173;UBERON:0006601!7.34e-09!173;UBERON:0004121!8.74e-09!169;UBERON:0000064!4.40e-08!219;UBERON:0000166!8.32e-08!21;UBERON:0003056!9.12e-08!61;UBERON:0000466!1.27e-07!126;UBERON:0005177!1.93e-07!107;UBERON:0003102!2.00e-07!95;UBERON:0001004!3.14e-07!72;UBERON:0002346!5.60e-07!90;UBERON:0003075!5.81e-07!86;UBERON:0007284!5.81e-07!86;UBERON:0003929!9.78e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;9.94e-12;14!UBERON:0004921;2.84e-10;33!UBERON:0002294;5.53e-10;7!UBERON:0001173;5.53e-10;7!UBERON:0002423;3.59e-09;25!UBERON:0001044;7.98e-07;6!UBERON:0003293;7.98e-07;6!UBERON:0003294;7.98e-07;6!UBERON:0010047;7.98e-07;6!UBERON:0003408;7.98e-07;6!UBERON:0000167;7.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.99e-15,160;UBERON:0000925,8.99e-15,160;UBERON:0006595,8.99e-15,160;UBERON:0004921,1.01e-14,118;UBERON:0001007,1.32e-13,145;UBERON:0001555,1.32e-13,145;UBERON:0007026,1.32e-13,145;UBERON:0001041,1.19e-10,87;UBERON:0005911,2.90e-10,82;UBERON:0005177,2.11e-09,101;UBERON:0009497,7.31e-09,25;UBERON:0000015,7.31e-09,25;UBERON:0002423,7.31e-09,25;UBERON:0006235,7.31e-09,25;UBERON:0004161,7.31e-09,25;UBERON:0011216,2.28e-08,223;UBERON:0002294,2.76e-07,9;UBERON:0001173,2.76e-07,9;UBERON:0004912,2.76e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,2.32637182047304,0,0.727752183563449,0.232429036905685,0,0,0,0,0,0,0,0,0.752969358170419,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.44846518960824,0,0,0,0,0.087834785693126,1.30979075497713,1.82147644146271,1.85392221392215,3.57002133020152,3.83085422058388,4.91944453919801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.206651562351531,1.18800285728205,0.989067717114227,0,0,0.673344455816265,0.500474079487857,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.508681776931463,0.193260853163297,0,0.573609190778008,0,0.132529768321485,0.348581828608555,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,2.09080345523293,0.171567810298526,0.548751427043128,5.62008766288098,2.11110842064425,1.11106134190236,0.325808305310325,1.03993478527958,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.985143749731331,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0.432359860250884,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.4400297149257,0.387815147273333,0,0,0,0,0,0,0,0.57191197463259,0,2.46972101034231,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0,0.117141414992713,0,0,1.03473071292505,0,0,1.65078867489357,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.355123450626254,1.06765302817952,0.519254429183621,0.697262270759755,1.57117284469109,1.20303882181971,9.76058482720501,0.114814448164607,0,0,3.15839729035188,0.847168708148562,0,1.46139224653261,2.95544560900052,0,0,0,0,0,0,0.764628819135115,0,0,0,0,1.79515087581472,4.59220503979588,1.95227036798582,0.824328093181778,0.915694648183434,0.330037999682352,0,0,0,0,0,0,0.137836572484531,0,0,0,0,1.32227932288782,0.384380134730212,0.127612712494584,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0.354761064070598,2.9555068941673,0,1.13841952129715,0.699869440489966,0.384888450902048,1.34060455107157,1.08890984861323,1.31801321087491,2.15252686335615,0,6.65145230305014,1.83778720165568,0,0,0,0,0,0,0,0,0,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,1.96937182974718,0.667852230137435,0,0,0,0,0,0,0,0,1.70749867179921,3.22238114416096,0,2.86065876347107,0,0,0.969332746095218,1.02044907978036,0,0,0,0,0.568967241427498,0,1.18193840883968,0,0,0,0,1.68835014075571,1.52581736317083,1.87984741883082,0,1.09692698576986,10.78490788838,6.41349223681575,0.923403102045565,1.25336261431701,0,0,0.108647371922008,0.31900115973192,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,3.53382678584852,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0.269604531922708,0,0.234264445725339,0,5.08728009223433,0,0,0,0.61214552326098,0.063186579628488,0,0.829505531177977,0,0,0,0,0,0.138674673013139,2.60339607502696,2.35181753794506,0.522355239482415,0.17472666824203,0,0.290268993867255,2.77739404927505,0.903270027585302,2.71569246167574,0,1.35588444468319,0,0,0.696418755514666,1.17330829640882,2.16428814679141,1.28071796843612,1.39866726707491,2.01726584015748,0,0,2.3048767678104,0.248505071130865,7.07082103850386,0,0,0.101998217636322,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,16.3094329338435,4.96334048535509,3.62629776877132,5.32487996448061,0.295282444544246,0,0,0.953423842781029,0,0,0.415440338029185,0,2.32140586367385,0.668245123238271,8.38586718998165,1.97014268247995,2.7276385830199,0,6.27505687664957,6.71703190618059,0,0,0,0,0,0,0,0,0,0,1.02586563574658,6.62534444561107,0.129282956361551,1.05786081394152,1.19760786519031,6.34333520085005,2.0289608387862,0.471612915298998,0,0,0,0,2.55336503108073,0,0,0,0,9.89440806376476,0,1.22026264901963,0.876336514945499,0,0.332787154610557,0.745156835296601,0.968440444553616,2.37462775128003,0,0,1.17632909849086,0,0.724605143054126,0,0,0,1.89403005275089,0.251567901752575,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697852591396,0,0,0,0.214441591374926,0.260994291965212,0.453411851024545,0,0,0,0,1.31570429747224,0,0,0,0,0,0.303859956177382,1.52084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| ||
|short_description=p2@FOXQ1 | |||
}} | }} |
Latest revision as of 17:52, 24 September 2015
Short description: | p2@FOXQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXQ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -487bp_to_ENST00000296839, NM_033260, uc003mtl.3_5end |
EntrezGene: | FOXQ1 |
HGNC: | 20951 |
UniProt: | Q9C009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.43e-14 | 253 |
endodermal cell | 4.93e-14 | 58 |
endo-epithelial cell | 2.16e-11 | 42 |
epithelial cell of alimentary canal | 7.86e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.99e-15 | 160 |
endoderm | 8.99e-15 | 160 |
presumptive endoderm | 8.99e-15 | 160 |
subdivision of digestive tract | 1.01e-14 | 118 |
digestive system | 1.32e-13 | 145 |
digestive tract | 1.32e-13 | 145 |
primitive gut | 1.32e-13 | 145 |
foregut | 1.19e-10 | 87 |
endo-epithelium | 2.90e-10 | 82 |
trunk region element | 2.11e-09 | 101 |
epithelium of foregut-midgut junction | 7.31e-09 | 25 |
anatomical boundary | 7.31e-09 | 25 |
hepatobiliary system | 7.31e-09 | 25 |
foregut-midgut junction | 7.31e-09 | 25 |
septum transversum | 7.31e-09 | 25 |
organ system subdivision | 2.28e-08 | 223 |
biliary system | 2.76e-07 | 9 |
biliary tree | 2.76e-07 | 9 |
biliary bud | 2.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.61e-14 | 106 |
cell type cancer | 5.25e-10 | 143 |
adenocarcinoma | 7.42e-08 | 25 |