FFCP PHASE1:Hg19::chr6:130687547..130687569,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:130687547..130687569,+
|short_description=p2@TMEM200A
|description=CAGE_peak_2_at_TMEM200A_5end
|association_with_transcript=17bp_to_AK315824_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=A8K2A1 | |UniProt=A8K2A1 | ||
|association_with_transcript=17bp_to_AK315824_5end | |||
|cluster_id=chr6:130687547..130687569,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_2_at_TMEM200A_5end | |||
|id=chr6:130687547..130687569,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.76e-40!180;CL:0000680!6.22e-22!57;CL:0000056!6.22e-22!57;CL:0000355!6.22e-22!57;CL:0000187!1.21e-21!54;CL:0000393!4.33e-20!60;CL:0000211!4.33e-20!60;CL:0000192!5.50e-20!42;CL:0000514!5.50e-20!42;CL:0000359!9.48e-19!32;CL:0000183!4.04e-18!59;CL:0000057!4.14e-18!75;CL:0002620!5.77e-09!23;CL:0000222!7.14e-09!119;CL:0000723!1.84e-07!436;CL:0000034!2.19e-07!444;CL:0002334!2.62e-07!12;CL:0000048!3.20e-07!430;CL:0002539!4.54e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.69e-21;32!CL:0000192;3.36e-18;43!CL:0000187;5.74e-13;55!CL:0000393;3.46e-11;61!CL:0000211;3.46e-11;61!CL:0002620;2.68e-10;23!CL:0002334;1.01e-08;12!CL:0002539;1.98e-08;10!CL:0000057;9.99e-08;73!CL:0002320;7.06e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.88e-25,55;CL:0000192,2.44e-25,43;CL:0000514,2.44e-25,43;CL:0000680,3.91e-25,58;CL:0000056,3.91e-25,58;CL:0000355,3.91e-25,58;CL:0000359,4.48e-23,32;CL:0000393,9.64e-22,61;CL:0000211,9.64e-22,61;CL:0000057,5.40e-20,76;CL:0000723,1.84e-15,433;CL:0000048,7.27e-15,427;CL:0000034,7.79e-15,441;CL:0000222,9.27e-11,121;CL:0002620,2.02e-10,23;CL:0002334,9.31e-09,12;CL:0002539,1.85e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.36e-18;43!CL:0000355;1.53e-12;58 | |||
|ontology_enrichment_disease=DOID:2394!5.89e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.63e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.24e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.05e-23!83;UBERON:0002329!7.05e-23!83;UBERON:0003077!7.05e-23!83;UBERON:0003059!7.05e-23!83;UBERON:0007282!7.05e-23!83;UBERON:0009618!7.05e-23!83;UBERON:0007285!7.05e-23!83;UBERON:0004290!3.33e-20!70;UBERON:0001134!2.96e-19!61;UBERON:0002036!2.96e-19!61;UBERON:0003082!2.96e-19!61;UBERON:0000486!5.02e-19!82;UBERON:0002385!9.80e-19!63;UBERON:0001015!9.80e-19!63;UBERON:0000383!9.80e-19!63;UBERON:0005256!1.04e-11!143;UBERON:0000475!1.04e-11!365;UBERON:0001637!1.24e-11!42;UBERON:0003509!1.24e-11!42;UBERON:0004572!1.24e-11!42;UBERON:0004573!2.11e-10!33;UBERON:0004571!2.11e-10!33;UBERON:0002049!1.68e-08!79;UBERON:0007798!1.68e-08!79;UBERON:0003102!1.84e-08!95;UBERON:0002100!3.16e-08!216;UBERON:0002199!1.62e-07!45;UBERON:0002416!1.62e-07!45;UBERON:0004872!2.16e-07!84;UBERON:0004237!4.54e-07!10;UBERON:0004695!4.54e-07!10;UBERON:0002111!4.54e-07!10;UBERON:0004178!4.54e-07!10;UBERON:0002097!5.64e-07!40;UBERON:0001981!5.73e-07!60;UBERON:0007500!5.73e-07!60;UBERON:0004537!5.73e-07!60;UBERON:0006965!5.73e-07!60;UBERON:0001135!6.27e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.42e-12;33!UBERON:0004571;7.42e-12;33!UBERON:0001637;2.59e-09;42!UBERON:0003509;2.59e-09;42!UBERON:0004572;2.59e-09;42!UBERON:0004237;1.98e-08;10!UBERON:0004695;1.98e-08;10!UBERON:0002111;1.98e-08;10!UBERON:0004178;1.98e-08;10!UBERON:0001135;2.10e-07;15!UBERON:0002097;2.98e-07;41!UBERON:0002199;4.82e-07;46!UBERON:0002416;4.82e-07;46!UBERON:0002384;8.57e-07;198 | |||
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| ||
|short_description=p2@TMEM200A | |||
}} | }} |
Latest revision as of 17:36, 24 September 2015
Short description: | p2@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 17bp_to_AK315824_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | A8K2A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.88e-25 | 55 |
smooth muscle cell | 2.44e-25 | 43 |
smooth muscle myoblast | 2.44e-25 | 43 |
muscle precursor cell | 3.91e-25 | 58 |
myoblast | 3.91e-25 | 58 |
multi-potent skeletal muscle stem cell | 3.91e-25 | 58 |
vascular associated smooth muscle cell | 4.48e-23 | 32 |
electrically responsive cell | 9.64e-22 | 61 |
electrically active cell | 9.64e-22 | 61 |
fibroblast | 5.40e-20 | 76 |
somatic stem cell | 1.84e-15 | 433 |
multi fate stem cell | 7.27e-15 | 427 |
stem cell | 7.79e-15 | 441 |
mesodermal cell | 9.27e-11 | 121 |
skin fibroblast | 2.02e-10 | 23 |
preadipocyte | 9.31e-09 | 12 |
aortic smooth muscle cell | 1.85e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.24e-10 | 14 |