FFCP PHASE1:Hg19::chr6:12314459..12314482,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:12314459..12314482,-
|short_description=p3@EDN1
|description=CAGE_peak_3_at_EDN1_5end
|association_with_transcript=145bp_to_BC036851_5end
|EntrezGene=1906...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1906 | |EntrezGene=1906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3176 | |HGNC=3176 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=145bp_to_BC036851_5end | |||
|cluster_id=chr6:12314459..12314482,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_3_at_EDN1_5end | |||
|id=chr6:12314459..12314482,- | |||
|ontology_enrichment_celltype=CL:0000066!1.47e-35!254;CL:0002076!2.62e-24!43;CL:0000223!8.43e-17!59;CL:0002368!9.31e-15!13;CL:0000622!3.46e-10!5;CL:0000244!1.81e-09!4;CL:0000731!1.81e-09!4;CL:0002159!5.17e-09!13;CL:0000154!2.16e-08!6;CL:0002202!3.81e-08!9;CL:0002632!3.81e-08!9;CL:0002251!3.83e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.33e-28;13!CL:0000244;2.85e-25;4!CL:0000731;2.85e-25;4!CL:0002076;7.20e-19;42!CL:0002202;1.70e-16;9!CL:0002632;1.70e-16;9!CL:0002159;6.25e-15;14!CL:0000317;1.33e-13;2!CL:1000448;1.33e-13;2!CL:0002308;1.33e-13;2!CL:0002140;1.33e-13;2!CL:1000415;1.63e-12;2!CL:0000362;4.25e-11;9!CL:0002328;4.60e-09;3!CL:0002621;7.56e-09;3!CL:0000322;1.23e-08;3!CL:0000082;1.46e-07;19!CL:0002252;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.35e-28,13;CL:0000244,2.95e-25,4;CL:0000731,2.95e-25,4;CL:0002076,4.00e-21,42;CL:0000066,2.54e-18,253;CL:0002202,1.08e-16,9;CL:0002632,1.08e-16,9;CL:0002159,6.50e-15,14;CL:0000223,1.39e-14,58;CL:0000317,1.38e-13,2;CL:1000448,1.38e-13,2;CL:0002308,1.38e-13,2;CL:0002140,1.38e-13,2;CL:1000415,1.08e-12,2;CL:0000362,3.69e-11,9;CL:0002328,4.42e-09,3;CL:0000322,7.42e-09,3;CL:0002621,1.14e-08,3;CL:0000082,1.18e-07,19;CL:0002252,5.19e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;6.25e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.55e-14!106;DOID:0050687!1.41e-09!143;DOID:299!5.55e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;4.33e-07;1!DOID:3603;4.33e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.84e-07,1;DOID:3603,5.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-18!169;UBERON:0000925!1.06e-18!169;UBERON:0006595!1.06e-18!169;UBERON:0001004!4.53e-18!72;UBERON:0000065!1.30e-15!53;UBERON:0001737!2.07e-15!9;UBERON:0008947!3.55e-13!38;UBERON:0003258!3.55e-13!38;UBERON:0001007!2.19e-12!155;UBERON:0001555!2.19e-12!155;UBERON:0007026!2.19e-12!155;UBERON:0000072!3.94e-11!46;UBERON:0000365!7.80e-11!5;UBERON:0000077!4.20e-10!130;UBERON:0004921!6.78e-10!129;UBERON:0004185!6.78e-10!129;UBERON:0005911!8.60e-10!82;UBERON:0001557!3.42e-09!19;UBERON:0005910!6.41e-09!6;UBERON:0001041!9.74e-09!98;UBERON:0006554!2.55e-08!44;UBERON:0001008!4.86e-08!45;UBERON:0000923!6.27e-08!604;UBERON:0005291!6.27e-08!604;UBERON:0006598!6.27e-08!604;UBERON:0002532!6.27e-08!604;UBERON:0002050!7.09e-08!605;UBERON:0005423!7.09e-08!605;UBERON:0000467!9.56e-08!625;UBERON:0000480!1.08e-07!626;UBERON:0000922!1.65e-07!612;UBERON:0001048!1.98e-07!168;UBERON:0000481!3.70e-07!347;UBERON:0002294!4.25e-07!7;UBERON:0001173!4.25e-07!7;UBERON:0004912!4.25e-07!7;UBERON:0000488!4.72e-07!4;UBERON:0003104!6.15e-07!238;UBERON:0009142!6.15e-07!238;UBERON:0000062!6.40e-07!511;UBERON:0005153!9.14e-07!37 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.02e-20,5;UBERON:0005910,6.70e-17,6;UBERON:0002419,1.38e-13,2;UBERON:0007771,1.38e-13,2;UBERON:0003297,1.38e-13,2;UBERON:0001821,1.38e-13,2;UBERON:0003487,1.38e-13,2;UBERON:0001820,1.38e-13,2;UBERON:0005089,1.38e-13,2;UBERON:0005088,1.38e-13,2;UBERON:0004119,2.82e-13,160;UBERON:0000925,2.82e-13,160;UBERON:0006595,2.82e-13,160;UBERON:0005911,1.94e-11,82;UBERON:0007196,6.31e-10,15;UBERON:0001558,6.31e-10,15;UBERON:0004807,1.74e-09,28;UBERON:0000065,2.77e-09,54;UBERON:0001004,3.24e-09,74;UBERON:0004815,4.42e-09,3;UBERON:0002031,4.42e-09,3;UBERON:0004821,7.42e-09,3;UBERON:0003215,7.42e-09,3;UBERON:0010368,7.42e-09,3;UBERON:0009911,7.42e-09,3;UBERON:0002299,7.42e-09,3;UBERON:0006524,7.42e-09,3;UBERON:0008874,7.42e-09,3;UBERON:0002169,7.42e-09,3;UBERON:0004894,7.42e-09,3;UBERON:0002110,9.40e-09,3;UBERON:0006242,9.40e-09,3;UBERON:0001949,1.14e-08,3;UBERON:0005178,9.80e-08,34;UBERON:0002224,9.80e-08,34;UBERON:0004802,1.18e-07,19;UBERON:0000115,1.18e-07,19;UBERON:0005181,1.73e-07,35;UBERON:0004913,1.74e-07,1;UBERON:0003703,1.74e-07,1;UBERON:0001174,1.74e-07,1;UBERON:0004914,1.74e-07,1;UBERON:0006554,4.30e-07,47;UBERON:0001008,6.39e-07,48;UBERON:0008947,7.97e-07,38;UBERON:0003258,7.97e-07,38 | |||
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| ||
|short_description=p3@EDN1 | |||
}} | }} |
Latest revision as of 05:26, 20 September 2015
Short description: | p3@EDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDN1_5end |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | 145bp_to_BC036851_5end |
EntrezGene: | EDN1 |
HGNC: | 3176 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.35e-28 | 13 |
transitional epithelial cell | 2.95e-25 | 4 |
urothelial cell | 2.95e-25 | 4 |
endo-epithelial cell | 4.00e-21 | 42 |
epithelial cell | 2.54e-18 | 253 |
epithelial cell of tracheobronchial tree | 1.08e-16 | 9 |
epithelial cell of lower respiratory tract | 1.08e-16 | 9 |
general ecto-epithelial cell | 6.50e-15 | 14 |
endodermal cell | 1.39e-14 | 58 |
sebum secreting cell | 1.38e-13 | 2 |
epithelial cell of sweat gland | 1.38e-13 | 2 |
epithelial cell of skin gland | 1.38e-13 | 2 |
acinar cell of sebaceous gland | 1.38e-13 | 2 |
epithelial cell of gall bladder | 1.08e-12 | 2 |
epidermal cell | 3.69e-11 | 9 |
bronchial epithelial cell | 4.42e-09 | 3 |
pneumocyte | 7.42e-09 | 3 |
gingival epithelial cell | 1.14e-08 | 3 |
epithelial cell of lung | 1.18e-07 | 19 |
epithelial cell of esophagus | 5.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.84e-07 | 1 |
mucinous cystadenocarcinoma | 5.84e-07 | 1 |