FFCP PHASE1:Hg19::chr6:111580680..111580691,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:111580680..111580691,+
|short_description=p3@KIAA1919
|description=CAGE_peak_3_at_KIAA1919_5end
|association_with_transcript=129bp_to_ENST00000368847_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91749 | |EntrezGene=91749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21053 | |HGNC=21053 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TF39 | |UniProt=Q5TF39 | ||
|association_with_transcript=129bp_to_ENST00000368847_5end | |||
|cluster_id=chr6:111580680..111580691,+ | |||
|coexpression_cluster_id=C739 | |||
|description=CAGE_peak_3_at_KIAA1919_5end | |||
|id=chr6:111580680..111580691,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.41e-18!172;CL:0000566!6.41e-18!172;CL:0000738!3.55e-16!140;CL:0002057!3.90e-16!42;CL:0000988!8.90e-16!182;CL:0002032!1.14e-15!165;CL:0000837!1.14e-15!165;CL:0000763!1.38e-15!112;CL:0000049!1.38e-15!112;CL:0000766!7.90e-15!76;CL:0000860!1.86e-14!45;CL:0000557!2.20e-14!71;CL:0002031!1.82e-12!124;CL:0002393!4.02e-12!9;CL:0002397!4.02e-12!9;CL:0000839!2.48e-11!70;CL:0002009!6.46e-10!65;CL:0002087!7.65e-10!119;CL:0002194!1.60e-08!63;CL:0000576!1.60e-08!63;CL:0000040!1.60e-08!63;CL:0000559!1.60e-08!63;CL:0002274!1.27e-07!5;CL:0000457!1.27e-07!5;CL:0002191!1.27e-07!5;CL:0000097!1.27e-07!5;CL:0000831!1.27e-07!5;CL:0002028!1.27e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.33e-21;5!CL:0000767;1.42e-15;3!CL:0000094;4.65e-13;8!CL:0002032;7.02e-13;1!CL:0000557;7.02e-13;1!CL:0000163;7.84e-12;9!CL:0000081;1.19e-09;11!CL:0002393;3.02e-08;6!CL:0002397;3.02e-08;6!CL:0001014;5.73e-07;2!CL:0001016;5.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.93e-21,5;CL:0002028,8.93e-21,5;CL:0000767,1.06e-15,3;CL:0000094,3.78e-13,8;CL:0000763,5.17e-13,108;CL:0000049,5.17e-13,108;CL:0000163,8.15e-12,9;CL:0002032,1.93e-11,161;CL:0000837,1.93e-11,161;CL:0000766,3.42e-11,72;CL:0000037,6.98e-11,168;CL:0000988,3.14e-10,177;CL:0000738,6.34e-10,136;CL:0000081,1.03e-09,11;CL:0000557,1.33e-09,67;CL:0001014,6.07e-07,2;CL:0001016,6.07e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.60e-12;1!UBERON:0007297;8.76e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.34e-13;1!DOID:4549;8.34e-13;1!DOID:5861;8.34e-13;1!DOID:6496;8.34e-13;1!DOID:1799;2.60e-12;1!DOID:10165;2.60e-12;1!DOID:1798;2.60e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.89e-13,1;DOID:4549,7.89e-13,1;DOID:5861,7.89e-13,1;DOID:6496,7.89e-13,1;DOID:1799,1.57e-12,1;DOID:10165,1.57e-12,1;DOID:1798,1.57e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.74e-12!80;UBERON:0002390!7.54e-12!102;UBERON:0003061!7.54e-12!102;UBERON:0001474!8.09e-12!86;UBERON:0002193!1.09e-09!112;UBERON:0004765!4.85e-09!101;UBERON:0001434!4.85e-09!101;UBERON:0002405!7.19e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.60e-12;1!UBERON:0006868;2.60e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.46e-12,1;UBERON:0006868,2.46e-12,1;UBERON:0001474,8.72e-10,82;UBERON:0004765,7.98e-09,90;UBERON:0002371,2.26e-08,76;UBERON:0001434,7.77e-08,100 | |||
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| ||
|short_description=p3@KIAA1919 | |||
}} | }} |
Latest revision as of 20:33, 19 September 2015
Short description: | p3@KIAA1919 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIAA1919_5end |
Coexpression cluster: | C739_granulocyte_CD34_CD19_CD14CD16_CD4_Mesothelial_Dendritic |
Association with transcript: | 129bp_to_ENST00000368847_5end |
EntrezGene: | KIAA1919 |
HGNC: | 21053 |
UniProt: | Q5TF39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.93e-21 | 5 |
basophil mast progenitor cell | 8.93e-21 | 5 |
basophil | 1.06e-15 | 3 |
granulocyte | 3.78e-13 | 8 |
myeloid cell | 5.17e-13 | 108 |
common myeloid progenitor | 5.17e-13 | 108 |
endocrine cell | 8.15e-12 | 9 |
hematopoietic oligopotent progenitor cell | 1.93e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-11 | 161 |
myeloid leukocyte | 3.42e-11 | 72 |
hematopoietic stem cell | 6.98e-11 | 168 |
hematopoietic cell | 3.14e-10 | 177 |
leukocyte | 6.34e-10 | 136 |
blood cell | 1.03e-09 | 11 |
granulocyte monocyte progenitor cell | 1.33e-09 | 67 |
CD1a-positive Langerhans cell | 6.07e-07 | 2 |
immature CD1a-positive Langerhans cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.46e-12 | 1 |
seminal fluid secreting gland | 2.46e-12 | 1 |
bone element | 8.72e-10 | 82 |
skeletal element | 7.98e-09 | 90 |
bone marrow | 2.26e-08 | 76 |
skeletal system | 7.77e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.89e-13 | 1 |
extraosseous chondrosarcoma | 7.89e-13 | 1 |
myxoid chondrosarcoma | 7.89e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 7.89e-13 | 1 |
islet cell tumor | 1.57e-12 | 1 |
endocrine pancreas cancer | 1.57e-12 | 1 |
pancreatic endocrine carcinoma | 1.57e-12 | 1 |