FFCP PHASE1:Hg19::chr6:10528700..10528719,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:10528700..10528719,+
|short_description=p4@GCNT2
|description=CAGE_peak_4_at_GCNT2_5end
|association_with_transcript=111bp_to_ENST00000379597,uc003mzc.3_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0V5 | |UniProt=Q8N0V5 | ||
|association_with_transcript=111bp_to_ENST00000379597,uc003mzc.3_5end | |||
|cluster_id=chr6:10528700..10528719,+ | |||
|description=CAGE_peak_4_at_GCNT2_5end | |||
|id=chr6:10528700..10528719,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.57e-15!119;CL:0000738!4.99e-14!140;CL:0002031!4.88e-13!124;CL:0000037!1.33e-09!172;CL:0000566!1.33e-09!172;CL:0000945!1.36e-09!24;CL:0000826!1.36e-09!24;CL:0002032!6.91e-09!165;CL:0000837!6.91e-09!165;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0002009!1.51e-08!65;CL:0000988!1.05e-07!182;CL:0000860!2.05e-07!45;CL:0000542!2.55e-07!53;CL:0000051!2.55e-07!53;CL:0000838!4.10e-07!52;CL:0000839!6.26e-07!70;CL:0000557!8.87e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.76e-10;13!CL:0000945;9.61e-10;24!CL:0000182;3.76e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.45e-10,24;CL:0000826,7.45e-10,24;CL:0000236,2.02e-09,14;CL:0000182,3.81e-07,12;CL:0002087,5.36e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.34e-12;29!UBERON:0001041;3.74e-09;30 | |||
|ontology_enrichment_disease=DOID:305!3.54e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.34e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.59e-10!115;UBERON:0004921!1.16e-08!129;UBERON:0004185!1.16e-08!129;UBERON:0002193!2.92e-08!112;UBERON:0001007!2.55e-07!155;UBERON:0001555!2.55e-07!155;UBERON:0007026!2.55e-07!155;UBERON:0001041!2.91e-07!98;UBERON:0000077!7.09e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.90e-09;9!UBERON:0001557;1.90e-09;9!UBERON:0002423;2.48e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.33e-12,118;UBERON:0001041,1.29e-10,87;UBERON:0001737,2.99e-09,9;UBERON:0009856,3.26e-09,26;UBERON:0001007,4.88e-09,145;UBERON:0001555,4.88e-09,145;UBERON:0007026,4.88e-09,145;UBERON:0008947,1.44e-08,38;UBERON:0003258,1.44e-08,38;UBERON:0007499,2.20e-08,25;UBERON:0009854,2.41e-08,23;UBERON:0004119,1.09e-07,160;UBERON:0000925,1.09e-07,160;UBERON:0006595,1.09e-07,160;UBERON:0008835,1.62e-07,22;UBERON:0003894,1.62e-07,22;UBERON:0009497,2.30e-07,25;UBERON:0000015,2.30e-07,25;UBERON:0002423,2.30e-07,25;UBERON:0006235,2.30e-07,25;UBERON:0004161,2.30e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0.251085279189606,0.840547463227464,0.328402357799783,0.865818594450472,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,3.40855682553327,4.54941543959749,1.46800219667424,0,0,0.651032612147555,1.56740831967947,0.647787332037959,2.57575567634187,0.436194716338694,4.91238726795452,2.42584061187816,0.464858073811369,1.6446715520873,0,0,1.5369642391746,2.36482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,1.09162460023138,1.34834090667051,0.918251677112708,0.641858054152187,1.27867425159808,0.659702600373432,2.99195486432448,2.98357325372886,0,0,0.622822248995575,0.251248665256743,1.0429658368404,0.868755378820466,1.81619850790011,1.47311054395026,1.26584954976354,0.845021145247767,1.27562579979026,0.628975936525128,1.23561494261145,1.35159203557356,0.803627933485401,0,1.19350006319454,0.365328307529268,0,2.18455444504853,6.22656477704488,5.54749289336459,5.60554381850417,6.32227683949932,3.30522436392431,8.58648379081828,5.69212969109448,2.93618594685469,4.20500550937752,1.32171328579026,1.12101712596307,0.526768169550154,0.786839080455332,0.393010762749165,0.822405995998037,1.17030546773475,0.977766799900771,1.89379122293893,3.89653456815823,0.111410456885174,2.06224135232386,1.55073726208535,2.97884250141517,0.640456598628376,0.650296737799391,0.986627427622057,1.10540007114339,2.89803085735052,1.03800594213442,1.33770414044857,1.04535523804977,0.339928028092699,1.53288197440768,2.06176467289578,1.26509846009751,0,2.60433381542567,0,1.6563263098555,1.15187950038977,0,0.710331756132051,1.64225599384209,0.604820229674197,0,0.579297615531196,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.567208902984407,0.443458794925128,0.263504357079378,1.5062593682237,0,0,0,0.696518949197069,0.398873881556595,0.715471872916026,1.71598473234038,0.74291500265913,0.79504962946682,0.860234595106124,0.347140501607594,0,0,0,0.417989933073621,0.775250277507987,1.06729878806013,2.00832367658802,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0.81014194788176,1.16089646769304,0.673588117878509,0.900891843866578,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.61246251376468,0.61417158655884,0,0,0,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,2.36613600079688,2.86593973132773,3.37415441836875,2.53676137284506,3.26819166138609,2.13543557199987,2.42696354688296,3.53198637225623,1.15424147083917,1.4763109092493,0,0,0,5.07020139287323,10.8110993834539,6.49868897349544,0,2.7057456479485,1.02940686179115,0,0,0,0,0.325808305310325,0,0,0,0.587043471179108,2.7429625074604,2.77791307545966,1.52203321787679,0,0,0.984868024349589,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0,0,0,0.288239906833923,0,4.25435891757533,8.02175693672383,5.86087236050235,1.71072446022705,1.85089486865982,5.40617504119051,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,2.10833939483032,0,0,0,0.144781306667579,0.821905290201534,0,0.336255431980582,0.394061520403854,0.215627574859517,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0.451199612907412,2.0794141018192,1.56869953835371,0,2.21658420675039,0,0.680374821106063,0.431831832204279,0,0,0,2.29388645740534,2.49322802678617,0.223874754722178,0,0.522870902049801,0.256450125116389,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0.384380134730212,2.04180339991335,1.0115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,1.5743737541619,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,1.08890984861323,2.91845782408015,0,0,0.443430153536676,0.459446800413919,0,0,0.569647187174163,1.19115887728894,1.23408681925858,1.29694662238543,0,0.79312517629427,0.747768497892312,0,9.80160863924127,0.929015875628594,0,0.355709216742071,0,0.399158742865633,0.766021480529467,1.48171507906718,0.649243880549111,0,0,0,0,0,0.1605880751037,0,1.27753871307098,0,0,0.447352215784832,0.667396566847634,1.17232857241224,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0.557216921387392,1.70481688083848,0,0,0,0,0.562677665642051,0.445234820091624,0,0,3.58646378851925,3.86797481743607,19.3988215847793,0.920418142519393,0.738508832766417,0,2.51631383212515,2.32727527078292,0,0.0986434056369336,2.3948309234694,1.11136990144637,0,0.0927680981618513,0,0,5.24759999977174,1.44999915086959,0,3.55955110409873,0.236387681767936,0,0,0,0,0,0,0.1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| ||
|short_description=p4@GCNT2 | |||
}} | }} |
Latest revision as of 13:36, 19 September 2015
Short description: | p4@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_ENST00000379597, uc003mzc.3_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8N0V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.45e-10 | 24 |
pro-B cell | 7.45e-10 | 24 |
B cell | 2.02e-09 | 14 |
hepatocyte | 3.81e-07 | 12 |
nongranular leukocyte | 5.36e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.33e-12 | 118 |
foregut | 1.29e-10 | 87 |
larynx | 2.99e-09 | 9 |
sac | 3.26e-09 | 26 |
digestive system | 4.88e-09 | 145 |
digestive tract | 4.88e-09 | 145 |
primitive gut | 4.88e-09 | 145 |
respiratory primordium | 1.44e-08 | 38 |
endoderm of foregut | 1.44e-08 | 38 |
epithelial sac | 2.20e-08 | 25 |
digestive tract diverticulum | 2.41e-08 | 23 |
endoderm-derived structure | 1.09e-07 | 160 |
endoderm | 1.09e-07 | 160 |
presumptive endoderm | 1.09e-07 | 160 |
hepatic diverticulum | 1.62e-07 | 22 |
liver primordium | 1.62e-07 | 22 |
epithelium of foregut-midgut junction | 2.30e-07 | 25 |
anatomical boundary | 2.30e-07 | 25 |
hepatobiliary system | 2.30e-07 | 25 |
foregut-midgut junction | 2.30e-07 | 25 |
septum transversum | 2.30e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.34e-07 | 106 |