FFCP PHASE1:Hg19::chr5:53751518..53751538,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:53751518..53751538,+
|short_description=p1@HSPB3
|description=CAGE_peak_1_at_HSPB3_5end
|association_with_transcript=73bp_to_ENST00000302005,uc003jph.1_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8988 | |EntrezGene=8988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5248 | |HGNC=5248 | ||
|TSSclassifier=strong | |||
|UniProt=Q12988 | |UniProt=Q12988 | ||
|association_with_transcript=73bp_to_ENST00000302005,uc003jph.1_5end | |||
|cluster_id=chr5:53751518..53751538,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_HSPB3_5end | |||
|id=chr5:53751518..53751538,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.28e-13!23;CL:0000057!1.11e-08!75;CL:0000055!2.99e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.39e-18;23!CL:0000188;2.38e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.24e-18,23;CL:0000057,3.06e-10,76;CL:0000188,2.25e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.67e-07;4!UBERON:0007284;7.67e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!9.97e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;3.42e-07;5!DOID:450;3.42e-07;5!DOID:66;3.42e-07;5!DOID:423;3.42e-07;5!DOID:0080000;3.42e-07;5!DOID:11722;3.42e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.26e-07,5;DOID:450,3.26e-07,5;DOID:66,3.26e-07,5;DOID:423,3.26e-07,5;DOID:0080000,3.26e-07,5;DOID:11722,3.26e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-15!115;UBERON:0003102!5.01e-14!95;UBERON:0000153!6.20e-14!129;UBERON:0007811!6.20e-14!129;UBERON:0000033!1.34e-13!123;UBERON:0000475!3.01e-13!365;UBERON:0000481!1.02e-12!347;UBERON:0002097!4.22e-11!40;UBERON:0000468!5.89e-11!659;UBERON:0000062!1.45e-10!511;UBERON:0000467!1.87e-10!625;UBERON:0000480!2.52e-10!626;UBERON:0000165!2.83e-10!28;UBERON:0000930!2.83e-10!28;UBERON:0002199!2.98e-09!45;UBERON:0002416!2.98e-09!45;UBERON:0001950!3.11e-09!20;UBERON:0004121!4.23e-09!169;UBERON:0002619!7.02e-09!22;UBERON:0000924!1.18e-08!173;UBERON:0006601!1.18e-08!173;UBERON:0000078!5.97e-08!18;UBERON:0000914!6.02e-08!83;UBERON:0002329!6.02e-08!83;UBERON:0003077!6.02e-08!83;UBERON:0003059!6.02e-08!83;UBERON:0007282!6.02e-08!83;UBERON:0009618!6.02e-08!83;UBERON:0007285!6.02e-08!83;UBERON:0000956!8.02e-08!25;UBERON:0000203!8.02e-08!25;UBERON:0003129!1.96e-07!11;UBERON:0002780!2.03e-07!41;UBERON:0001890!2.03e-07!41;UBERON:0006240!2.03e-07!41;UBERON:0001869!2.26e-07!32;UBERON:0005743!2.39e-07!86;UBERON:0001893!4.33e-07!34;UBERON:0003080!4.88e-07!42;UBERON:0000166!5.65e-07!21;UBERON:0000955!6.82e-07!69;UBERON:0006238!6.82e-07!69;UBERON:0002020!9.65e-07!34;UBERON:0003528!9.65e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.60e-15;16!UBERON:0002036;1.60e-15;16!UBERON:0002097;1.82e-12;41!UBERON:0002199;1.32e-10;46!UBERON:0002416;1.32e-10;46!UBERON:0001950;2.64e-10;20!UBERON:0002619;3.10e-10;22!UBERON:0000165;1.63e-09;28!UBERON:0011137;6.53e-09;11!UBERON:0010323;6.53e-09;11!UBERON:0000956;1.53e-08;25!UBERON:0000203;1.53e-08;25!UBERON:0003102;3.79e-08;50!UBERON:0003129;2.09e-07;7!UBERON:0000200;5.06e-07;6!UBERON:0001869;5.75e-07;32!UBERON:0002385;7.90e-07;31!UBERON:0001015;7.90e-07;31!UBERON:0000383;7.90e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.81e-19,99;UBERON:0002097,7.04e-17,41;UBERON:0002199,4.37e-14,46;UBERON:0002416,4.37e-14,46;UBERON:0007023,7.37e-12,114;UBERON:0010314,2.46e-11,132;UBERON:0000165,2.60e-10,29;UBERON:0000930,2.60e-10,29;UBERON:0001950,2.82e-10,20;UBERON:0002619,3.55e-10,22;UBERON:0010323,4.87e-09,11;UBERON:0000956,1.71e-08,25;UBERON:0000203,1.71e-08,25;UBERON:0004121,3.75e-08,171;UBERON:0000924,3.75e-08,171;UBERON:0006601,3.75e-08,171;UBERON:0011137,7.62e-08,14;UBERON:0001869,1.26e-07,32;UBERON:0003129,1.93e-07,7;UBERON:0002780,2.07e-07,41;UBERON:0001890,2.07e-07,41;UBERON:0003080,2.07e-07,41;UBERON:0006240,2.07e-07,41;UBERON:0000153,3.67e-07,62;UBERON:0007811,3.67e-07,62;UBERON:0000200,6.16e-07,6;UBERON:0001893,6.29e-07,34;UBERON:0000033,8.04e-07,56 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.794455084879313,0,0,2.80338800071154,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0,0,0.234321431833797,2.49728061464256,0.570471821544449,12.7031378469031,2.3486899728753,4.20869655357142,4.6348766211742,1.42907919878425,0.245668634623536,1.96318984233954,10.6920257155385,8.90160945402805,0,0,1.68336113954066,1.00094815897571,1.38532057742091,6.14568669233173,20.8411701143333,6.91095070970345,0.794025282120147,6.63741652048789,12.1727711626583,28.3988747553813,3.90118424909723,18.549455262919,11.5938243020533,17.681101351501,1.68776332241266,4.57953924257634,7.82544700156755,20.3430275999482,6.95078044320891,8.52023022039874,17.7323692880647,13.3952867925285,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,5.14592750554308,2.76269842704961,15.7885095530873,66.4129123136019,0.354920400119532,0.674338760312407,0,0.330881918197182,0.217879444092406,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,10.2906097969879,0,0,0,0,0,0,0.768251997860379,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.85569617938061,0.850650583454319,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0.253991577168676,0.381988425558278,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.714889968290738,0.542621605391443,0,0,1.06617584622764,0,3.31583314765545,2.61460037580088,1.89948683245908,0,0,0,0.718874566474748,0,0,9.98991016006297,7.3971476118138,7.52056045607561,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,1.00034104211935,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0.368738337083406,46.7433845838286,0,31.9123384144096,0,0,0,0,0,0.30239029332968,0,1.84154367945675,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,6.41125312790973,3.93617574839647,9.43597344526479,1.23649213977267,17.1234899210302,19.8022799809411,0.574265537996172,0,0,10.8271204487177,5.85384745035649,11.3592719297336,26.1889487720608,0.751941714077915,10.8762520435671,20.8805237169447,79.1494796899495,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,1.5250415513906,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0.405820753925408,1.239293992399,0,0.286822704408103,0.196498082026242,0.7133421029625,2.12856638442359,2.32218398827431,2.30506425071931,0,0,0,0,0,0.564862804660675,0,0,0,0.689170200620878,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,5.96488588659779,2.53204949538923,0,0,0,0.398495976502139,0.552567831062295,0,0.20453736500431,0,21.4617315486647,0,0,0,2.66337195219721,0,0,0.969332746095218,3.6179558283122,3.99227596002388,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,7.23971810608109,0.21787692703798,9.34139086666642,0.230850775511391,7.97594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,4.27721101453538,0,0,0,0.269604531922708,32.9056835392503,0.468528891450678,0,0.391329237864179,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0.685946781900644,0,11.357233435732,0,0.290268993867255,0.0730893170861856,0,6.11030803877042,0,9.0392296312213,0,0,4.17851253308799,14.861905087845,1.20238230377301,0,2.59752492456769,0,0,0,0,0,0.942776138467182,2.17446729717782,2.92887969674533,0.203996435272644,0.288950589901519,0,0,0,5.15718529703949,1.05154941711726,72.3341419295138,159.037334264108,40.9187624008784,85.2629332130692,250.238786063621,285.436294068155,123.416038958116,0.360299883542404,0,0,0,0,0,0,0,1.0896272488926,0,0,0,0,0,4.37396807937778,13.0819528163714,0.236417121897595,0.0524545881349981,0,0,0,136.506807337313,247.622396916671,0,0,2.5926644736038,0.326587360109409,0,0,0.340776043570843,0.339936274560377,0,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.628817220398664,0,0,0,0,3.19170628885091,0,0,0,0,0,9.74674997963685,4.75902433117656,2.1282458220105,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,2.46223906857616,2.0125432140206,2.66943366478961,0,0.453692771289717,0,0.147855149989634,2.38945150745554,1.79921244865442,0.776314784381297,0.414706207840855,1.59505028734797,2.60872530905867,5.55953153289708,0.761610424337591,0.813741466409323,13.8204980993945,1.61115835563733,8.81664143769138,5.97143833047924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| ||
|short_description=p1@HSPB3 | |||
}} | }} |
Latest revision as of 03:12, 18 September 2015
Short description: | p1@HSPB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSPB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 73bp_to_ENST00000302005, uc003jph.1_5end |
EntrezGene: | HSPB3 |
HGNC: | 5248 |
UniProt: | Q12988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.24e-18 | 23 |
fibroblast | 3.06e-10 | 76 |
cell of skeletal muscle | 2.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.81e-19 | 99 |
skin of body | 7.04e-17 | 41 |
integument | 4.37e-14 | 46 |
integumental system | 4.37e-14 | 46 |
adult organism | 7.37e-12 | 114 |
structure with developmental contribution from neural crest | 2.46e-11 | 132 |
mouth | 2.60e-10 | 29 |
stomodeum | 2.60e-10 | 29 |
neocortex | 2.82e-10 | 20 |
regional part of cerebral cortex | 3.55e-10 | 22 |
cranial skeletal system | 4.87e-09 | 11 |
cerebral cortex | 1.71e-08 | 25 |
pallium | 1.71e-08 | 25 |
ectoderm-derived structure | 3.75e-08 | 171 |
ectoderm | 3.75e-08 | 171 |
presumptive ectoderm | 3.75e-08 | 171 |
axial skeletal system | 7.62e-08 | 14 |
cerebral hemisphere | 1.26e-07 | 32 |
skull | 1.93e-07 | 7 |
regional part of forebrain | 2.07e-07 | 41 |
forebrain | 2.07e-07 | 41 |
anterior neural tube | 2.07e-07 | 41 |
future forebrain | 2.07e-07 | 41 |
anterior region of body | 3.67e-07 | 62 |
craniocervical region | 3.67e-07 | 62 |
gyrus | 6.16e-07 | 6 |
telencephalon | 6.29e-07 | 34 |
head | 8.04e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.26e-07 | 5 |
myotonic disease | 3.26e-07 | 5 |
muscle tissue disease | 3.26e-07 | 5 |
myopathy | 3.26e-07 | 5 |
muscular disease | 3.26e-07 | 5 |
myotonic dystrophy | 3.26e-07 | 5 |