FFCP PHASE1:Hg19::chr17:79849438..79849493,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10189 | |EntrezGene=10189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19071 | |HGNC=19071 | ||
|TSSclassifier=strong | |||
|UniProt=Q86V81,E9PB61 | |UniProt=Q86V81,E9PB61 | ||
|association_with_transcript=0bp_to_ENST00000331204,ENST00000505490,NM_005782,uc002kbu.2_5end | |association_with_transcript=0bp_to_ENST00000331204,ENST00000505490,NM_005782,uc002kbu.2_5end | ||
|cluster_id=chr17:79849438..79849493,- | |||
|coexpression_cluster_id=C2408 | |coexpression_cluster_id=C2408 | ||
|description=CAGE_peak_1_at_ALYREF_5end | |description=CAGE_peak_1_at_ALYREF_5end |
Latest revision as of 09:19, 18 September 2015
Short description: | p1@ALYREF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALYREF_5end |
Coexpression cluster: | C2408_Alveolar_Renal_Mesenchymal_Mammary_chronic_Smooth_Trabecular |
Association with transcript: | 0bp_to_ENST00000331204, ENST00000505490, NM_005782, uc002kbu.2_5end |
EntrezGene: | ALYREF |
HGNC: | 19071 |
UniProt: | Q86V81E9PB61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ALYREF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.12e-16 | 250 |
epithelial cell | 1.48e-15 | 253 |
mesodermal cell | 7.35e-09 | 121 |
squamous epithelial cell | 4.93e-07 | 63 |
endothelial cell | 9.91e-07 | 36 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.72e-07 | 22 |
unilaminar epithelium | 8.16e-07 | 148 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
cancer | 2.68e-22 | 235 |
disease of cellular proliferation | 9.78e-22 | 239 |
hematologic cancer | 1.38e-17 | 51 |
immune system cancer | 1.38e-17 | 51 |
leukemia | 2.18e-14 | 39 |
organ system cancer | 2.27e-13 | 137 |
myeloid leukemia | 7.04e-12 | 31 |
cell type cancer | 2.40e-09 | 143 |
carcinoma | 2.45e-08 | 106 |
Showing 1 to 9 of 9 entries