FFCP PHASE1:Hg19::chr5:31639071..31639086,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:31639071..31639086,+
|short_description=p7@PDZD2
|description=CAGE_peak_7_at_PDZD2_5end
|association_with_transcript=-430bp_to_ENST00000382161,ENST00000438...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23037 | |EntrezGene=23037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18486 | |HGNC=18486 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUJ3,O15018 | |UniProt=E7EUJ3,O15018 | ||
|association_with_transcript=-430bp_to_ENST00000382161,ENST00000438447,uc003jhl.2_5end | |||
|cluster_id=chr5:31639071..31639086,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_7_at_PDZD2_5end | |||
|id=chr5:31639071..31639086,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.75e-19;2!UBERON:0006601;2.14e-16;82!UBERON:0006222;8.24e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.55e-66!32;UBERON:0001893!7.46e-62!34;UBERON:0002020!1.65e-61!34;UBERON:0003528!1.65e-61!34;UBERON:0002780!1.14e-59!41;UBERON:0001890!1.14e-59!41;UBERON:0006240!1.14e-59!41;UBERON:0001049!2.73e-59!57;UBERON:0005068!2.73e-59!57;UBERON:0006241!2.73e-59!57;UBERON:0007135!2.73e-59!57;UBERON:0002791!2.21e-58!33;UBERON:0003080!3.98e-58!42;UBERON:0002616!4.67e-57!59;UBERON:0000955!5.85e-54!69;UBERON:0006238!5.85e-54!69;UBERON:0007023!4.78e-52!115;UBERON:0005743!9.59e-51!86;UBERON:0001017!1.84e-50!82;UBERON:0002619!4.23e-47!22;UBERON:0002346!1.18e-45!90;UBERON:0000073!3.08e-45!94;UBERON:0001016!3.08e-45!94;UBERON:0003075!3.09e-45!86;UBERON:0007284!3.09e-45!86;UBERON:0003056!2.32e-41!61;UBERON:0000956!3.62e-41!25;UBERON:0000203!3.62e-41!25;UBERON:0001950!1.92e-40!20;UBERON:0000033!4.04e-31!123;UBERON:0000153!2.61e-29!129;UBERON:0007811!2.61e-29!129;UBERON:0002420!1.13e-28!9;UBERON:0007245!1.13e-28!9;UBERON:0010009!1.13e-28!9;UBERON:0010011!1.13e-28!9;UBERON:0000454!1.13e-28!9;UBERON:0000924!4.53e-24!173;UBERON:0006601!4.53e-24!173;UBERON:0004121!2.72e-23!169;UBERON:0002308!7.65e-22!9;UBERON:0000125!7.65e-22!9;UBERON:0009663!1.97e-21!7;UBERON:0000349!4.80e-20!5;UBERON:0001871!8.92e-18!7;UBERON:0000369!1.02e-17!4;UBERON:0002435!1.02e-17!4;UBERON:0000204!1.02e-17!4;UBERON:0010082!1.02e-17!4;UBERON:0000025!6.68e-17!194;UBERON:0000200!7.37e-17!6;UBERON:0005383!9.41e-14!3;UBERON:0005382!9.41e-14!3;UBERON:0001872!2.58e-13!5;UBERON:0000064!6.73e-13!219;UBERON:0002771!8.46e-13!3;UBERON:0004111!4.98e-12!241;UBERON:0000483!1.57e-11!309;UBERON:0000119!2.47e-11!312;UBERON:0001873!1.01e-09!2;UBERON:0010122!1.01e-09!2;UBERON:0000477!1.07e-09!286;UBERON:0001875!3.76e-09!2;UBERON:0006514!3.76e-09!2;UBERON:0000475!4.67e-09!365;UBERON:0001876!4.79e-09!2;UBERON:0002360!8.35e-09!2;UBERON:0000094!8.35e-09!2;UBERON:0007645!8.35e-09!2;UBERON:0001954!9.40e-09!2;UBERON:0003022!9.40e-09!2;UBERON:0002421!9.40e-09!2;UBERON:0002600!9.40e-09!2;UBERON:0002021!5.11e-08!5;UBERON:0000062!9.65e-08!511;UBERON:0002298!1.56e-07!8;UBERON:0004733!1.97e-07!12;UBERON:0002028!1.97e-07!12;UBERON:0007277!1.97e-07!12;UBERON:0004732!7.69e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.11e-74;32!UBERON:0001893;4.55e-71;34!UBERON:0002791;2.96e-69;32!UBERON:0003528;1.11e-59;34!UBERON:0002020;1.11e-59;34!UBERON:0001950;3.66e-57;20!UBERON:0002619;4.91e-52;22!UBERON:0002780;6.71e-49;41!UBERON:0001890;6.71e-49;41!UBERON:0000956;8.02e-46;25!UBERON:0000203;8.02e-46;25!UBERON:0000369;1.80e-36;4!UBERON:0002435;1.80e-36;4!UBERON:0000204;1.80e-36;4!UBERON:0002420;2.29e-35;9!UBERON:0007245;2.29e-35;9!UBERON:0010009;2.29e-35;9!UBERON:0010011;2.29e-35;9!UBERON:0000454;2.29e-35;9!UBERON:0009663;5.01e-32;7!UBERON:0005383;7.13e-28;3!UBERON:0005382;7.13e-28;3!UBERON:0000073;1.40e-26;53!UBERON:0002616;1.40e-26;53!UBERON:0000125;6.63e-25;9!UBERON:0002308;6.63e-25;9!UBERON:0000955;7.01e-25;68!UBERON:0001017;1.85e-23;75!UBERON:0000200;5.74e-23;6!UBERON:0001873;3.75e-19;2!UBERON:0002021;3.36e-16;5!UBERON:0001872;5.22e-16;5!UBERON:0001016;2.68e-15;83!UBERON:0007023;1.71e-13;114!UBERON:0001870;1.84e-12;3!UBERON:0001871;7.15e-12;6!UBERON:0001874;1.65e-10;1!UBERON:0001882;2.16e-10;1!UBERON:0005403;2.16e-10;1!UBERON:0002022;2.48e-10;1!UBERON:0002902;3.88e-10;1!UBERON:0009899;3.88e-10;1!UBERON:0002581;8.24e-10;1!UBERON:0003112;8.24e-10;1!UBERON:0001301;8.24e-10;1!UBERON:0011158;8.24e-10;1!UBERON:0007190;8.24e-10;1!UBERON:0003128;8.24e-10;1!UBERON:0001703;8.24e-10;1!UBERON:0002241;8.24e-10;1!UBERON:0000349;4.69e-08;5!UBERON:0011216;1.17e-07;132!UBERON:0010314;4.68e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.71e-82,32;UBERON:0001893,1.26e-77,34;UBERON:0002791,1.75e-73,32;UBERON:0002780,1.20e-71,41;UBERON:0001890,1.20e-71,41;UBERON:0003080,1.20e-71,41;UBERON:0006240,1.20e-71,41;UBERON:0003528,3.90e-69,34;UBERON:0002020,3.90e-69,34;UBERON:0001950,4.48e-57,20;UBERON:0000073,4.27e-55,53;UBERON:0002616,4.27e-55,53;UBERON:0001049,4.80e-52,56;UBERON:0005068,4.80e-52,56;UBERON:0006241,4.80e-52,56;UBERON:0007135,4.80e-52,56;UBERON:0002619,5.90e-52,22;UBERON:0003056,1.29e-47,61;UBERON:0000955,1.50e-46,68;UBERON:0006238,1.50e-46,68;UBERON:0000956,9.44e-46,25;UBERON:0000203,9.44e-46,25;UBERON:0001017,4.48e-43,81;UBERON:0001016,1.46e-38,89;UBERON:0000369,1.80e-36,4;UBERON:0002435,1.80e-36,4;UBERON:0000204,1.80e-36,4;UBERON:0010082,1.80e-36,4;UBERON:0002420,1.70e-35,9;UBERON:0007245,1.70e-35,9;UBERON:0010009,1.70e-35,9;UBERON:0010011,1.70e-35,9;UBERON:0000454,1.70e-35,9;UBERON:0003075,7.95e-35,82;UBERON:0007284,7.95e-35,82;UBERON:0007023,1.04e-33,114;UBERON:0002346,4.35e-33,86;UBERON:0009663,4.56e-32,7;UBERON:0005383,7.14e-28,3;UBERON:0005382,7.14e-28,3;UBERON:0010371,6.68e-27,104;UBERON:0000125,6.17e-25,9;UBERON:0002308,6.17e-25,9;UBERON:0010314,5.03e-23,132;UBERON:0000200,5.91e-23,6;UBERON:0001873,3.75e-19,2;UBERON:0010122,3.75e-19,2;UBERON:0004121,6.84e-19,171;UBERON:0000924,6.84e-19,171;UBERON:0006601,6.84e-19,171;UBERON:0002021,3.93e-16,5;UBERON:0001872,4.36e-16,5;UBERON:0011216,2.67e-15,223;UBERON:0000025,7.29e-15,192;UBERON:0001870,2.38e-12,3;UBERON:0001871,7.28e-12,6;UBERON:0004111,3.01e-11,240;UBERON:0001874,1.65e-10,1;UBERON:0001882,2.16e-10,1;UBERON:0005403,2.16e-10,1;UBERON:0002022,2.37e-10,1;UBERON:0002902,3.10e-10,1;UBERON:0009899,3.10e-10,1;UBERON:0007190,5.79e-10,1;UBERON:0002581,7.55e-10,1;UBERON:0003112,8.99e-10,1;UBERON:0011158,8.99e-10,1;UBERON:0003128,8.99e-10,1;UBERON:0001703,8.99e-10,1;UBERON:0002241,8.99e-10,1;UBERON:0004761,8.99e-10,1;UBERON:0009617,8.99e-10,1;UBERON:0001301,1.07e-09,1;UBERON:0000349,4.15e-08,5;UBERON:0000483,4.18e-08,306;UBERON:0000119,5.40e-08,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,1.94813006139888,0,0,0,0,0,0,0.236387681767936,0,0,0,7.08593108651071,8.20055782652774,0,0.110579259931225,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63985112007737,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0,0,0,2.34249945036751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,3.09822738955926,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3184990331373,1.1267183763585,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33102568300614,1.41696576325585,0,2.2562800066483,0,2.42050383624763,1.61475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.95858995393344,0.781078098613847,1.86018116851066,2.34638497717455,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.475788130837822,1.64431933907123,0,0,0,9.74116657479212,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3117106664911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,1.94813006139888,0,0,0,0,0,0,0.236387681767936,0,0,0,7.08593108651071,8.20055782652774,0,0.110579259931225,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63985112007737,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0,0,0,2.34249945036751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,3.09822738955926,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3184990331373,1.1267183763585,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33102568300614,1.41696576325585,0,2.2562800066483,0,2.42050383624763,1.61475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.95858995393344,0.781078098613847,1.86018116851066,2.34638497717455,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.475788130837822,1.64431933907123,0,0,0,9.74116657479212,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3117106664911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p7@PDZD2 | |||
}} | }} |
Latest revision as of 14:58, 17 September 2015
Short description: | p7@PDZD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PDZD2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -430bp_to_ENST00000382161, ENST00000438447, uc003jhl.2_5end |
EntrezGene: | PDZD2 |
HGNC: | 18486 |
UniProt: | E7EUJ3O15018 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data