FFCP PHASE1:Hg19::chr5:20575754..20575777,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:20575754..20575777,-
|short_description=p6@CDH18
|description=CAGE_peak_6_at_CDH18_5end
|association_with_transcript=194bp_to_ENST00000507632_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=194bp_to_ENST00000507632_5end | |||
|cluster_id=chr5:20575754..20575777,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_CDH18_5end | |||
|id=chr5:20575754..20575777,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.14e-21;3!UBERON:0006601;3.31e-13;82!UBERON:0006241;2.69e-09;3!UBERON:0003057;2.69e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.12e-96!57;UBERON:0005068!8.12e-96!57;UBERON:0006241!8.12e-96!57;UBERON:0007135!8.12e-96!57;UBERON:0002616!1.08e-82!59;UBERON:0001017!6.73e-77!82;UBERON:0005743!2.12e-76!86;UBERON:0003075!7.09e-74!86;UBERON:0007284!7.09e-74!86;UBERON:0002020!9.63e-74!34;UBERON:0003528!9.63e-74!34;UBERON:0002780!1.01e-73!41;UBERON:0001890!1.01e-73!41;UBERON:0006240!1.01e-73!41;UBERON:0001893!4.61e-73!34;UBERON:0001869!1.55e-72!32;UBERON:0000955!4.54e-72!69;UBERON:0006238!4.54e-72!69;UBERON:0003080!8.06e-72!42;UBERON:0002346!3.64e-70!90;UBERON:0002791!1.00e-69!33;UBERON:0000073!2.53e-68!94;UBERON:0001016!2.53e-68!94;UBERON:0002619!3.03e-58!22;UBERON:0001950!1.29e-57!20;UBERON:0000956!6.61e-51!25;UBERON:0000203!6.61e-51!25;UBERON:0003056!1.31e-50!61;UBERON:0007023!1.95e-45!115;UBERON:0000033!4.26e-41!123;UBERON:0000153!6.93e-41!129;UBERON:0007811!6.93e-41!129;UBERON:0004121!1.15e-35!169;UBERON:0000924!1.30e-34!173;UBERON:0006601!1.30e-34!173;UBERON:0002308!5.47e-24!9;UBERON:0000125!5.47e-24!9;UBERON:0003076!1.03e-23!15;UBERON:0003057!1.03e-23!15;UBERON:0002420!1.60e-23!9;UBERON:0007245!1.60e-23!9;UBERON:0010009!1.60e-23!9;UBERON:0010011!1.60e-23!9;UBERON:0000454!1.60e-23!9;UBERON:0000200!6.73e-22!6;UBERON:0000025!1.77e-21!194;UBERON:0001871!3.56e-21!7;UBERON:0004733!2.01e-19!12;UBERON:0002028!2.01e-19!12;UBERON:0007277!2.01e-19!12;UBERON:0002021!4.63e-18!5;UBERON:0004732!8.20e-18!13;UBERON:0009663!3.64e-17!7;UBERON:0004111!2.13e-15!241;UBERON:0002680!3.89e-15!9;UBERON:0001895!3.89e-15!9;UBERON:0010092!3.89e-15!9;UBERON:0000369!4.00e-14!4;UBERON:0002435!4.00e-14!4;UBERON:0000204!4.00e-14!4;UBERON:0010082!4.00e-14!4;UBERON:0000483!4.47e-14!309;UBERON:0000119!7.70e-14!312;UBERON:0000064!1.60e-13!219;UBERON:0000477!3.21e-13!286;UBERON:0000988!3.00e-12!3;UBERON:0001872!4.06e-12!5;UBERON:0002771!5.40e-12!3;UBERON:0000349!6.39e-12!5;UBERON:0000475!8.36e-12!365;UBERON:0002298!9.14e-12!8;UBERON:0005383!5.66e-11!3;UBERON:0005382!5.66e-11!3;UBERON:0002148!8.90e-09!2;UBERON:0009662!8.90e-09!2;UBERON:0001870!2.24e-08!2;UBERON:0000481!2.37e-08!347;UBERON:0001876!3.21e-08!2;UBERON:0001897!5.67e-08!2;UBERON:0001873!7.26e-08!2;UBERON:0010122!7.26e-08!2;UBERON:0002360!1.03e-07!2;UBERON:0000094!1.03e-07!2;UBERON:0007645!1.03e-07!2;UBERON:0001875!1.03e-07!2;UBERON:0006514!1.03e-07!2;UBERON:0000062!6.04e-07!511;UBERON:0005174!6.07e-07!5;UBERON:0001137!6.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.37e-58;22!UBERON:0001950;4.56e-55;20!UBERON:0000956;8.57e-51;25!UBERON:0000203;8.57e-51;25!UBERON:0003528;1.12e-45;34!UBERON:0002020;1.12e-45;34!UBERON:0001869;6.31e-45;32!UBERON:0002791;3.55e-40;32!UBERON:0001893;9.00e-40;34!UBERON:0000073;4.61e-39;53!UBERON:0002616;4.61e-39;53!UBERON:0000200;6.32e-37;6!UBERON:0004733;1.17e-33;12!UBERON:0002028;1.17e-33;12!UBERON:0004732;5.56e-31;13!UBERON:0002780;7.38e-30;41!UBERON:0001890;7.38e-30;41!UBERON:0002298;1.10e-26;6!UBERON:0002680;6.75e-26;9!UBERON:0001895;6.75e-26;9!UBERON:0001017;2.44e-23;75!UBERON:0001016;1.54e-21;83!UBERON:0000955;3.88e-21;68!UBERON:0001872;2.12e-20;5!UBERON:0002021;3.77e-20;5!UBERON:0000988;4.07e-20;3!UBERON:0001870;3.31e-19;3!UBERON:0002148;4.25e-14;2!UBERON:0006331;4.25e-14;2!UBERON:0009662;4.25e-14;2!UBERON:0002771;1.69e-13;2!UBERON:0002702;1.69e-13;2!UBERON:0000349;7.87e-12;5!UBERON:0007023;3.75e-11;114!UBERON:0002037;1.22e-10;6!UBERON:0001896;1.93e-09;3!UBERON:0005290;1.93e-09;3!UBERON:0002240;2.69e-09;3!UBERON:0005174;2.69e-09;3!UBERON:0001137;2.69e-09;3!UBERON:0011216;1.12e-08;132!UBERON:0001871;1.56e-08;6!UBERON:0003112;9.43e-08;1!UBERON:0011158;9.43e-08;1!UBERON:0007190;9.43e-08;1!UBERON:0003128;9.43e-08;1!UBERON:0001703;9.43e-08;1!UBERON:0002241;9.43e-08;1!UBERON:0002581;1.97e-07;1!UBERON:0001882;1.97e-07;1!UBERON:0005403;1.97e-07;1!UBERON:0000125;6.37e-07;9!UBERON:0002308;6.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.10e-81,56;UBERON:0005068,1.10e-81,56;UBERON:0006241,1.10e-81,56;UBERON:0007135,1.10e-81,56;UBERON:0000073,4.55e-74,53;UBERON:0002616,4.55e-74,53;UBERON:0001017,9.92e-59,81;UBERON:0002619,4.85e-58,22;UBERON:0000955,4.83e-56,68;UBERON:0006238,4.83e-56,68;UBERON:0001950,2.51e-55,20;UBERON:0003075,1.51e-54,82;UBERON:0007284,1.51e-54,82;UBERON:0003528,3.44e-54,34;UBERON:0002020,3.44e-54,34;UBERON:0001016,1.72e-52,89;UBERON:0002346,8.24e-52,86;UBERON:0001869,5.09e-51,32;UBERON:0000956,5.30e-51,25;UBERON:0000203,5.30e-51,25;UBERON:0001893,6.57e-48,34;UBERON:0002791,5.44e-45,32;UBERON:0002780,2.83e-44,41;UBERON:0001890,2.83e-44,41;UBERON:0003080,2.83e-44,41;UBERON:0006240,2.83e-44,41;UBERON:0010371,4.57e-42,104;UBERON:0003076,2.03e-41,15;UBERON:0003057,2.03e-41,15;UBERON:0000200,4.78e-37,6;UBERON:0010314,8.54e-35,132;UBERON:0004733,1.15e-33,12;UBERON:0002028,1.15e-33,12;UBERON:0007277,1.15e-33,12;UBERON:0007023,1.96e-32,114;UBERON:0004732,5.47e-31,13;UBERON:0003056,8.19e-29,61;UBERON:0002298,1.07e-26,6;UBERON:0002680,6.22e-26,9;UBERON:0001895,6.22e-26,9;UBERON:0010092,6.22e-26,9;UBERON:0004121,2.52e-25,171;UBERON:0000924,2.52e-25,171;UBERON:0006601,2.52e-25,171;UBERON:0011216,2.02e-21,223;UBERON:0000025,1.53e-20,192;UBERON:0001872,3.17e-20,5;UBERON:0000988,3.58e-20,3;UBERON:0002021,4.07e-20,5;UBERON:0001870,1.56e-19,3;UBERON:0004111,2.10e-15,240;UBERON:0002148,3.99e-14,2;UBERON:0006331,3.99e-14,2;UBERON:0009662,3.99e-14,2;UBERON:0002702,1.12e-13,2;UBERON:0002771,1.27e-13,2;UBERON:0000483,5.05e-12,306;UBERON:0000119,7.45e-12,309;UBERON:0000349,8.18e-12,5;UBERON:0002037,1.23e-10,6;UBERON:0006215,1.23e-10,6;UBERON:0001896,2.05e-09,3;UBERON:0005290,2.05e-09,3;UBERON:0010096,2.05e-09,3;UBERON:0002240,2.14e-09,3;UBERON:0005174,2.14e-09,3;UBERON:0001137,2.14e-09,3;UBERON:0001871,1.14e-08,6;UBERON:0003112,1.07e-07,1;UBERON:0011158,1.07e-07,1;UBERON:0003128,1.07e-07,1;UBERON:0001703,1.07e-07,1;UBERON:0002241,1.07e-07,1;UBERON:0004761,1.07e-07,1;UBERON:0009617,1.07e-07,1;UBERON:0007190,1.15e-07,1;UBERON:0002581,2.47e-07,1;UBERON:0001882,3.17e-07,1;UBERON:0005403,3.17e-07,1;UBERON:0000125,7.28e-07,9;UBERON:0002308,7.28e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,44.2487035319541,84.4825545874556,25.7126428489586,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96263467463224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13267834056624,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61992277812342,3.30581504356725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.3184990331373,2.8793914062495,0,4.32623300993724,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,4.25089728976755,1.59633859057151,1.23069818544453,1.76450187355203,0.484100767249525,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,0,4.13373593002368,1.20490039368423,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,2.58284985311961,1.24968269769413,0,0,0,0.785577949580009,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,1.96308467114945,0,2.113278637917,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.413731983447581,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,44.2487035319541,84.4825545874556,25.7126428489586,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96263467463224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13267834056624,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61992277812342,3.30581504356725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.3184990331373,2.8793914062495,0,4.32623300993724,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,4.25089728976755,1.59633859057151,1.23069818544453,1.76450187355203,0.484100767249525,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,0,4.13373593002368,1.20490039368423,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,2.58284985311961,1.24968269769413,0,0,0,0.785577949580009,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,1.96308467114945,0,2.113278637917,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.413731983447581,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@CDH18 | |||
}} | }} |
Latest revision as of 12:53, 17 September 2015
Short description: | p6@CDH18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDH18_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 194bp_to_ENST00000507632_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data