FFCP PHASE1:Hg19::chr5:162887629..162887681,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:162887629..162887681,+
|short_description=p1@HMMR
|description=CAGE_peak_1_at_HMMR_5end
|association_with_transcript=0bp_to_ENST00000358715,ENST00000426586...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3161 | |EntrezGene=3161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5012 | |HGNC=5012 | ||
|TSSclassifier=strong | |||
|UniProt=O75330,F8WCW5 | |UniProt=O75330,F8WCW5 | ||
|association_with_transcript=0bp_to_ENST00000358715,ENST00000426586,ENST00000432118,ENST00000517936,ENST00000521108_5end | |||
|cluster_id=chr5:162887629..162887681,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_HMMR_5end | |||
|id=chr5:162887629..162887681,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.96e-18!679;CL:0000004!1.96e-18!679;CL:0000255!1.96e-18!679;CL:0000012!5.35e-18!682;CL:0000066!4.13e-14!254;CL:0000003!9.87e-12!722;CL:0000063!1.01e-08!578;CL:0002321!3.44e-07!248;CL:0000220!8.39e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.17e-15,253;CL:0002321,6.08e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.93e-53!235;DOID:14566!1.91e-52!239;DOID:0050686!2.00e-27!137;DOID:0050687!1.43e-23!143;DOID:2531!3.64e-22!51;DOID:0060083!3.64e-22!51;DOID:305!3.33e-19!106;DOID:1240!2.28e-16!39;DOID:8692!7.79e-12!31;DOID:7!4.65e-07!39;DOID:0060058!7.26e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.27e-13;51!DOID:0060083;1.27e-13;51!DOID:1240;4.10e-13;39!DOID:8692;1.15e-11;31!DOID:0050686;2.22e-07;137!DOID:0060058;6.40e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.88e-53,235;DOID:14566,3.92e-53,239;DOID:0050686,1.09e-27,137;DOID:0050687,7.38e-24,143;DOID:2531,2.06e-22,51;DOID:0060083,2.06e-22,51;DOID:305,2.05e-19,106;DOID:1240,1.52e-16,39;DOID:8692,5.86e-12,31;DOID:7,4.53e-07,39;DOID:0060058,6.26e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HMMR | |||
}} | }} |
Latest revision as of 18:04, 16 September 2015
Short description: | p1@HMMR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMMR_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000358715, ENST00000426586, ENST00000432118, ENST00000517936, ENST00000521108_5end |
EntrezGene: | HMMR |
HGNC: | 5012 |
UniProt: | O75330F8WCW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.17e-15 | 253 |
embryonic cell | 6.08e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.88e-53 | 235 |
disease of cellular proliferation | 3.92e-53 | 239 |
organ system cancer | 1.09e-27 | 137 |
cell type cancer | 7.38e-24 | 143 |
hematologic cancer | 2.06e-22 | 51 |
immune system cancer | 2.06e-22 | 51 |
carcinoma | 2.05e-19 | 106 |
leukemia | 1.52e-16 | 39 |
myeloid leukemia | 5.86e-12 | 31 |
disease of anatomical entity | 4.53e-07 | 39 |
lymphoma | 6.26e-07 | 10 |