FFCP PHASE1:Hg19::chr5:14664762..14664868,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:14664762..14664868,+
|short_description=p1@FAM105B
|description=CAGE_peak_1_at_FAM105B_5end
|association_with_transcript=0bp_to_ENST00000284274,ENST0000050...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90268 | |EntrezGene=90268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25118 | |HGNC=25118 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BN8,D6RD57 | |UniProt=Q96BN8,D6RD57 | ||
|association_with_transcript=0bp_to_ENST00000284274,ENST00000503023,ENST00000507335,NM_138348,uc003jfk.2_5end | |||
|cluster_id=chr5:14664762..14664868,+ | |||
|description=CAGE_peak_1_at_FAM105B_5end | |||
|id=chr5:14664762..14664868,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.71e-51!172;CL:0000566!2.71e-51!172;CL:0000738!5.87e-50!140;CL:0002032!5.21e-49!165;CL:0000837!5.21e-49!165;CL:0000988!2.19e-45!182;CL:0002031!3.09e-40!124;CL:0002087!7.33e-39!119;CL:0000763!5.38e-34!112;CL:0000049!5.38e-34!112;CL:0000766!1.82e-30!76;CL:0000557!9.77e-28!71;CL:0002009!1.14e-25!65;CL:0000839!1.56e-25!70;CL:0002194!2.52e-24!63;CL:0000576!2.52e-24!63;CL:0000040!2.52e-24!63;CL:0000559!2.52e-24!63;CL:0000860!1.50e-20!45;CL:0002057!5.45e-19!42;CL:0000542!5.41e-13!53;CL:0000051!5.41e-13!53;CL:0000838!5.78e-13!52;CL:0000451!6.59e-08!10;CL:0000084!7.68e-08!25;CL:0000827!7.68e-08!25;CL:0000791!7.15e-07!18;CL:0000789!7.15e-07!18;CL:0002420!7.15e-07!18;CL:0002419!7.15e-07!18;CL:0000790!7.15e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.43e-14;33!CL:0002057;3.43e-14;33!CL:0000473;2.79e-13;39!CL:0000234;2.79e-13;39!CL:0000576;4.30e-13;48!CL:0000766;1.88e-12;69!CL:0002087;1.28e-10;104!CL:0000738;1.51e-10;136!CL:0000763;1.95e-08;100!CL:0000542;6.21e-08;53!CL:0000451;6.84e-08;10!CL:0000084;8.26e-08;25!CL:0000988;1.03e-07;177!CL:0000791;7.80e-07;18!CL:0000789;7.80e-07;18!CL:0002419;7.80e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.67e-50,168;CL:0000738,1.58e-48,136;CL:0002032,1.57e-47,161;CL:0000837,1.57e-47,161;CL:0000988,4.09e-44,177;CL:0002031,7.01e-39,120;CL:0002087,1.60e-37,115;CL:0000763,1.09e-32,108;CL:0000049,1.09e-32,108;CL:0000766,2.90e-29,72;CL:0000557,1.50e-26,67;CL:0002009,1.67e-24,61;CL:0000839,2.41e-24,66;CL:0002194,3.67e-23,59;CL:0000576,3.67e-23,59;CL:0000040,3.67e-23,59;CL:0000559,3.67e-23,59;CL:0000473,2.61e-20,48;CL:0000234,2.61e-20,48;CL:0000860,5.45e-19,42;CL:0002057,5.45e-19,42;CL:0000542,5.41e-13,53;CL:0000051,5.41e-13,53;CL:0000838,5.78e-13,52;CL:0000451,6.59e-08,10;CL:0000084,7.68e-08,25;CL:0000827,7.68e-08,25;CL:0000791,7.15e-07,18;CL:0000789,7.15e-07,18;CL:0002420,7.15e-07,18;CL:0002419,7.15e-07,18;CL:0000790,7.15e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-14;42!CL:0000049;4.21e-09;108!CL:0000051;6.21e-08;53!CL:0000790;7.80e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.31e-09!235;DOID:14566!7.82e-09!239;DOID:305!6.15e-08!106;DOID:0050687!8.55e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.31e-09,235;DOID:14566,7.82e-09,239;DOID:305,6.15e-08,106;DOID:0050687,8.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.14e-28!102;UBERON:0003061!7.14e-28!102;UBERON:0002193!1.08e-25!112;UBERON:0002371!4.69e-24!80;UBERON:0001474!2.37e-23!86;UBERON:0002405!1.02e-21!115;UBERON:0004765!9.38e-19!101;UBERON:0001434!9.38e-19!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-26,98;UBERON:0003061,1.29e-26,98;UBERON:0002193,1.87e-24,108;UBERON:0002371,7.59e-23,76;UBERON:0001474,3.85e-22,82;UBERON:0002405,1.08e-21,93;UBERON:0004765,1.32e-18,90;UBERON:0001434,4.06e-16,100 | |||
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| ||
|short_description=p1@FAM105B | |||
}} | }} |
Latest revision as of 21:39, 15 September 2015
Short description: | p1@FAM105B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM105B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000284274, ENST00000503023, ENST00000507335, NM_138348, uc003jfk.2_5end |
EntrezGene: | FAM105B |
HGNC: | 25118 |
UniProt: | Q96BN8D6RD57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-26 | 98 |
blood island | 1.29e-26 | 98 |
hemolymphoid system | 1.87e-24 | 108 |
bone marrow | 7.59e-23 | 76 |
bone element | 3.85e-22 | 82 |
immune system | 1.08e-21 | 93 |
skeletal element | 1.32e-18 | 90 |
skeletal system | 4.06e-16 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.31e-09 | 235 |
disease of cellular proliferation | 7.82e-09 | 239 |
carcinoma | 6.15e-08 | 106 |
cell type cancer | 8.55e-07 | 143 |