FFCP PHASE1:Hg19::chr5:134787950..134787969,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:134787950..134787969,-
|short_description=p2@TIFAB
|description=CAGE_peak_2_at_TIFAB_5end
|association_with_transcript=119bp_to_ENST00000537858,NM_00109922...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=497189 | |EntrezGene=497189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34024 | |HGNC=34024 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZNK6 | |UniProt=Q6ZNK6 | ||
|association_with_transcript=119bp_to_ENST00000537858,NM_001099221,uc003law.3_5end | |||
|cluster_id=chr5:134787950..134787969,- | |||
|coexpression_cluster_id=C4466 | |||
|description=CAGE_peak_2_at_TIFAB_5end | |||
|id=chr5:134787950..134787969,- | |||
|ontology_enrichment_celltype=CL:0000557!1.46e-32!71;CL:0000763!8.45e-32!112;CL:0000049!8.45e-32!112;CL:0002009!3.38e-31!65;CL:0000839!4.02e-29!70;CL:0002194!1.48e-28!63;CL:0000576!1.48e-28!63;CL:0000040!1.48e-28!63;CL:0000559!1.48e-28!63;CL:0000037!3.49e-28!172;CL:0000566!3.49e-28!172;CL:0000766!1.50e-27!76;CL:0000738!2.21e-26!140;CL:0000988!1.48e-25!182;CL:0002032!4.35e-23!165;CL:0000837!4.35e-23!165;CL:0000451!4.40e-21!10;CL:0002031!5.76e-20!124;CL:0002087!4.30e-19!119;CL:0000990!1.91e-17!8;CL:0002057!3.39e-14!42;CL:0000860!7.98e-13!45;CL:0000840!4.26e-12!5;CL:0001029!4.26e-12!5;CL:0000453!2.67e-10!5;CL:0000784!3.99e-07!3;CL:0002619!9.65e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000451;1.88e-50;10!CL:0000990;1.32e-39;8!CL:0000840;8.98e-24;5!CL:0000453;1.43e-18;5!CL:0000784;3.31e-18;3!CL:0002619;4.58e-17;3!CL:0000235;6.92e-09;6!CL:0000037;9.25e-07;1!CL:0001024;9.25e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,1.98e-50,10;CL:0000990,1.43e-39,8;CL:0000840,9.20e-24,5;CL:0001029,9.20e-24,5;CL:0000453,1.49e-18,5;CL:0000784,3.32e-18,3;CL:0002619,4.58e-17,3;CL:0000763,2.91e-14,108;CL:0000049,2.91e-14,108;CL:0000037,3.53e-11,168;CL:0000557,4.88e-11,67;CL:0002009,1.71e-10,61;CL:0000988,2.25e-10,177;CL:0002194,4.44e-09,59;CL:0000576,4.44e-09,59;CL:0000040,4.44e-09,59;CL:0000559,4.44e-09,59;CL:0000235,7.31e-09,6;CL:0002032,2.91e-08,161;CL:0000837,2.91e-08,161;CL:0000738,3.93e-08,136;CL:0000839,6.46e-08,66;CL:0000766,4.23e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.25e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.58e-41!102;UBERON:0003061!7.58e-41!102;UBERON:0002193!5.04e-39!112;UBERON:0002371!3.56e-29!80;UBERON:0001474!3.26e-26!86;UBERON:0002405!4.32e-26!115;UBERON:0004765!2.19e-20!101;UBERON:0001434!2.19e-20!101;UBERON:0003081!4.89e-14!216;UBERON:0002204!4.47e-10!167;UBERON:0007023!1.63e-08!115;UBERON:0000178!1.62e-07!15;UBERON:0000179!1.62e-07!15;UBERON:0000463!1.62e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.27e-11;2!UBERON:0005058;2.27e-11;2!UBERON:0009113;2.27e-11;2!UBERON:0004177;6.31e-10;5!UBERON:0005057;6.31e-10;5!UBERON:0000029;6.60e-07;1!UBERON:0001154;9.25e-07;1!UBERON:0001153;9.25e-07;1!UBERON:0009854;9.25e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.43e-15,93;UBERON:0002193,2.81e-12,108;UBERON:0002390,3.29e-12,98;UBERON:0003061,3.29e-12,98;UBERON:0002371,4.57e-11,76;UBERON:0001474,4.64e-10,82;UBERON:0004765,6.32e-09,90;UBERON:0001434,9.15e-08,100;UBERON:0004177,2.88e-07,7;UBERON:0005057,2.88e-07,7;UBERON:0000029,6.60e-07,1;UBERON:0001154,8.75e-07,1;UBERON:0001153,8.75e-07,1;UBERON:0001045,8.75e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0,0,0,0,0,2.05520307534393,0,0,0.217010870715852,2.01523926815932,3.56283032620878,2.83333124397605,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0.512321413058201,0.709446689665756,0.689491361473237,0,0,0,0.272906150057846,0.898893937780338,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0,0,0.633765858935825,0.212604299965044,0.628975936525128,0.112328631146495,0.300353785683013,0.48217676009124,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,2.89722493252585,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.451725357233318,0.76791966692651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8418530857843,6.96518949197069,6.24902414438666,11.4475499666564,8.57992366170192,11.5151825412165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,2.73881614839831,0,0,0,0.642352300414798,12.5115818458449,0,0.687010689511529,1.53620382154229,0.894704431569664,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,2.48655523978033,0,0,0,0,0,0,6.65044081294933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72445172258151,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,1.24271716604159,3.47316215268366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,4.51740457065435,9.48679286683896,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0.154348316215889,1.74847648403166,0,0.245148321753905,0,0,0,0,0,0.751871343838829,1.93373663920732,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,1.87307838524418,1.05527014302958,0,0,0.404234377916439,0,0.342233301085281,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0,0,2.41528552309231,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0,0,0,0,0,2.05520307534393,0,0,0.217010870715852,2.01523926815932,3.56283032620878,2.83333124397605,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0.512321413058201,0.709446689665756,0.689491361473237,0,0,0,0.272906150057846,0.898893937780338,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0,0,0.633765858935825,0.212604299965044,0.628975936525128,0.112328631146495,0.300353785683013,0.48217676009124,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,2.89722493252585,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.451725357233318,0.76791966692651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8418530857843,6.96518949197069,6.24902414438666,11.4475499666564,8.57992366170192,11.5151825412165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,2.73881614839831,0,0,0,0.642352300414798,12.5115818458449,0,0.687010689511529,1.53620382154229,0.894704431569664,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,2.48655523978033,0,0,0,0,0,0,6.65044081294933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72445172258151,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,1.24271716604159,3.47316215268366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,4.51740457065435,9.48679286683896,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0.154348316215889,1.74847648403166,0,0.245148321753905,0,0,0,0,0,0.751871343838829,1.93373663920732,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,1.87307838524418,1.05527014302958,0,0,0.404234377916439,0,0.342233301085281,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0,0,2.41528552309231,0 | ||
|short_description=p2@TIFAB | |||
}} | }} |
Latest revision as of 18:18, 24 September 2015
Short description: | p2@TIFAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIFAB_5end |
Coexpression cluster: | C4466_acute_biphenotypic_Dendritic_Monocytederived_migratory_granulocyte_CD34 |
Association with transcript: | 119bp_to_ENST00000537858, NM_001099221, uc003law.3_5end |
EntrezGene: | TIFAB |
HGNC: | 34024 |
UniProt: | Q6ZNK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 1.98e-50 | 10 |
conventional dendritic cell | 1.43e-39 | 8 |
immature conventional dendritic cell | 9.20e-24 | 5 |
common dendritic progenitor | 9.20e-24 | 5 |
Langerhans cell | 1.49e-18 | 5 |
plasmacytoid dendritic cell | 3.32e-18 | 3 |
adult endothelial progenitor cell | 4.58e-17 | 3 |
myeloid cell | 2.91e-14 | 108 |
common myeloid progenitor | 2.91e-14 | 108 |
hematopoietic stem cell | 3.53e-11 | 168 |
granulocyte monocyte progenitor cell | 4.88e-11 | 67 |
macrophage dendritic cell progenitor | 1.71e-10 | 61 |
hematopoietic cell | 2.25e-10 | 177 |
monopoietic cell | 4.44e-09 | 59 |
monocyte | 4.44e-09 | 59 |
monoblast | 4.44e-09 | 59 |
promonocyte | 4.44e-09 | 59 |
macrophage | 7.31e-09 | 6 |
hematopoietic oligopotent progenitor cell | 2.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-08 | 161 |
leukocyte | 3.93e-08 | 136 |
myeloid lineage restricted progenitor cell | 6.46e-08 | 66 |
myeloid leukocyte | 4.23e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.43e-15 | 93 |
hemolymphoid system | 2.81e-12 | 108 |
hematopoietic system | 3.29e-12 | 98 |
blood island | 3.29e-12 | 98 |
bone marrow | 4.57e-11 | 76 |
bone element | 4.64e-10 | 82 |
skeletal element | 6.32e-09 | 90 |
skeletal system | 9.15e-08 | 100 |
hemopoietic organ | 2.88e-07 | 7 |
immune organ | 2.88e-07 | 7 |
lymph node | 6.60e-07 | 1 |
vermiform appendix | 8.75e-07 | 1 |
caecum | 8.75e-07 | 1 |
midgut | 8.75e-07 | 1 |