FFCP PHASE1:Hg19::chr5:121401645..121401695,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:121401645..121401695,-
|short_description=p@chr5:121401645..121401695,-
|description=CAGE_peak_at_chr5:121401645..121401695,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:121401645..121401695,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121401645..121401695,- | |||
|id=chr5:121401645..121401695,- | |||
|ontology_enrichment_celltype=CL:0000055!9.94e-33!180;CL:0000057!1.45e-23!75;CL:0000680!1.72e-11!57;CL:0000056!1.72e-11!57;CL:0000355!1.72e-11!57;CL:0002620!2.18e-11!23;CL:0000144!4.72e-11!625;CL:0000048!2.01e-10!430;CL:0000222!2.24e-10!119;CL:0000187!2.92e-10!54;CL:0002371!5.99e-10!591;CL:0000723!1.10e-09!436;CL:0000183!4.40e-09!59;CL:0002334!8.05e-09!12;CL:0000034!9.47e-09!444;CL:0000393!4.14e-08!60;CL:0000211!4.14e-08!60;CL:0000499!8.22e-08!27;CL:0000548!2.37e-07!679;CL:0000004!2.37e-07!679;CL:0000255!2.37e-07!679;CL:0000192!2.63e-07!42;CL:0000514!2.63e-07!42;CL:0000012!4.73e-07!682;CL:0000359!9.41e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.91e-13;12!CL:0002620;2.18e-12;23!CL:0000057;1.77e-09;73!CL:0000499;1.96e-08;28!CL:1000306;1.03e-07;4!CL:0002547;1.03e-07;4!CL:0002320;1.86e-07;188!CL:0002579;8.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.32e-25,76;CL:0002334,3.14e-13,12;CL:0002620,2.75e-12,23;CL:0000134,2.25e-11,354;CL:0000048,3.47e-11,427;CL:0002320,9.36e-11,361;CL:0000723,1.04e-10,433;CL:0000034,4.24e-10,441;CL:0000219,3.98e-09,386;CL:0000499,1.46e-08,28;CL:1000306,8.35e-08,4;CL:0002547,8.35e-08,4;CL:0002579,9.77e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.75e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.48e-10;14!DOID:17;3.07e-09;5!DOID:450;3.07e-09;5!DOID:66;3.07e-09;5!DOID:423;3.07e-09;5!DOID:0080000;3.07e-09;5!DOID:11722;3.07e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.00e-10,14;DOID:17,2.20e-09,5;DOID:450,2.20e-09,5;DOID:66,2.20e-09,5;DOID:423,2.20e-09,5;DOID:0080000,2.20e-09,5;DOID:11722,2.20e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!8.27e-11!61;UBERON:0002036!8.27e-11!61;UBERON:0003082!8.27e-11!61;UBERON:0000914!1.34e-10!83;UBERON:0002329!1.34e-10!83;UBERON:0003077!1.34e-10!83;UBERON:0003059!1.34e-10!83;UBERON:0007282!1.34e-10!83;UBERON:0009618!1.34e-10!83;UBERON:0007285!1.34e-10!83;UBERON:0004290!3.52e-10!70;UBERON:0002385!4.66e-10!63;UBERON:0001015!4.66e-10!63;UBERON:0000383!4.66e-10!63;UBERON:0000486!1.12e-08!82;UBERON:0004872!1.21e-08!84;UBERON:0002049!1.19e-07!79;UBERON:0007798!1.19e-07!79;UBERON:0004535!1.99e-07!110;UBERON:0003914!2.14e-07!118;UBERON:0004573!3.04e-07!33;UBERON:0004571!3.04e-07!33;UBERON:0001637!3.65e-07!42;UBERON:0003509!3.65e-07!42;UBERON:0004572!3.65e-07!42;UBERON:0000490!4.72e-07!138;UBERON:0000947!6.20e-07!21;UBERON:0010191!6.20e-07!21;UBERON:0005256!6.74e-07!143;UBERON:0001009!7.57e-07!113;UBERON:0002199!8.16e-07!45;UBERON:0002416!8.16e-07!45;UBERON:0003688!8.35e-07!6;UBERON:0002358!8.35e-07!6;UBERON:0003684!8.35e-07!6;UBERON:0001178!8.35e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.25e-12;9!UBERON:0000042;2.25e-12;9!UBERON:0003688;2.91e-11;6!UBERON:0002358;2.91e-11;6!UBERON:0003684;2.91e-11;6!UBERON:0001178;2.91e-11;6!UBERON:0002384;4.24e-08;198!UBERON:0002118;7.73e-08;5!UBERON:0004797;1.03e-07;4!UBERON:0000415;1.03e-07;4!UBERON:0007240;1.03e-07;4!UBERON:0005742;1.03e-07;4!UBERON:0005734;1.03e-07;4!UBERON:0004664;1.03e-07;4!UBERON:0004663;1.03e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.48e-11,6;UBERON:0002358,3.48e-11,6;UBERON:0003684,3.48e-11,6;UBERON:0001178,3.48e-11,6;UBERON:0002384,4.99e-11,371;UBERON:0004457,7.19e-09,12;UBERON:0000042,7.19e-09,12;UBERON:0002118,7.32e-08,5;UBERON:0000415,8.35e-08,4;UBERON:0007240,8.35e-08,4;UBERON:0005742,8.35e-08,4;UBERON:0005734,8.35e-08,4;UBERON:0004664,8.35e-08,4;UBERON:0004663,8.35e-08,4;UBERON:0002199,9.39e-08,46;UBERON:0002416,9.39e-08,46;UBERON:0002097,3.02e-07,41 | |||
|phase1_expression=2.72517568905835,6.20891519283851,2.53717927372748,14.0102617694383,2.23480547213644,6.97870819280295,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,0.602694528023977,0,1.46379839637152,0.246242116153576,0,0.313454721478088,0.572471974262113,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.02290049474824,4.3372698286148,3.50936537445123,2.75208386025565,0,1.45990461090791,0.378139268656271,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,4.47274756525787,2.78587125662075,5.95841313659485,8.03142538096678,2.4826786753885,2.80338800071154,1.06748995729705,0.98667019366864,0,0.134710672069688,0.163461903113459,0,1.72852777344,0,0,0,1.04614076386261,0.23486899728753,0.323745888736263,0.280901613404497,0,0,0.103325781175765,1.18800285728205,2.47266929278557,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,1.83892677479412,0.600952235626387,0.567160915800105,7.89314397030993,4.48470516518992,4.87443372666992,7.20218630602566,1.54578793857658,12.6243864622358,4.09457083929498,8.94514560878711,3.60516919096435,7.06814567883521,2.11714766877288,0.646584227275248,10.6502877754984,2.41805035746337,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.115930404975077,1.6437217193015,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0.224262168690721,0.43596006883328,0.22001485746285,2.06834745212444,0,0.845302752556,1.06375246633948,0,0,0,0,3.43147184779554,0.542621605391443,0,0,3.19852753868291,0,1.80863626235752,0,2.29937879718731,0,0,0,1.19812427745791,1.14861935834114,0,4.34343920002738,0.205476322550383,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,2.70362119990049,2.49800584316026,2.05013139544115,1.87426263988341,0.601892199455438,0,1.03473071292505,1.99267679560631,1.10621501125022,1.21637060255316,0,0,0,0,0,0,0,0,7.69134204238208,2.455391572609,5.61320188866147,7.17579235831925,6.14048698880044,8.68611174175481,4.45254199334973,1.54209693802656,1.42049380250502,0.657017248110473,0,2.20799719073923,0,0,0,0.68888668898764,1.45672934405374,1.31124414959424,0,0,0,1.46139224653261,0.211103257785751,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,9.64103579064957,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0.214840489736547,0.435050081742686,0.170453254832202,0.712256285173899,0,0,0,0,2.32422774648643,39.6663557006607,0.6970372701606,1.23213432070436,1.06461206063404,0.869932992075073,0.74129687641568,0.715624433709956,0,0.316379424718726,0.762520775695299,0,2.56763392820352,0,0.78494864019923,0.719489830333259,0.274537029736055,0.942499218765491,0.202182481573316,0,0,0,0.974853958525138,0,0.272999822815972,1.83827061539827,0,0.551365343546124,0,1.75380354101505,0.578775534266688,0,0.405820753925408,0.6196469961995,0,0.717056761020258,0.687743287091848,0.35667105148125,0,2.9555068941673,4.93942339439853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,1.22439575525196,0,0,0.19924798825107,0,0,0,0,6.22079175323615,0,0,0,0,0,2.22273980289274,0,0,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0.278847488557207,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,10.319161948297,0,0,0,0,0,0.451961481561065,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,5.15718529703949,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,7.20599767084807,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,1.26720403823288,0,0,0,0,0,4.3439968140297,5.18532894720761,2.61269888087527,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.470531639396343,0,0,1.19403842309499,2.57084640831947,2.21922344601045,0.568209015825267,0.251567901752575,1.77962244319307,2.05956061557231,1.20984739010591,0.310874401165561,0.73927574994817,1.27437413730962,0.449803112163605,0.155262956876259,0.414706207840855,6.91188457850787,2.60872530905867,2.55437935295271,7.23529903120711,3.66183659884195,1.2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| ||
|short_description=p@chr5:121401645..121401695,- | |||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121401645..121401695, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121401645..121401695, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.32e-25 | 76 |
preadipocyte | 3.14e-13 | 12 |
skin fibroblast | 2.75e-12 | 23 |
mesenchymal cell | 2.25e-11 | 354 |
multi fate stem cell | 3.47e-11 | 427 |
connective tissue cell | 9.36e-11 | 361 |
somatic stem cell | 1.04e-10 | 433 |
stem cell | 4.24e-10 | 441 |
motile cell | 3.98e-09 | 386 |
stromal cell | 1.46e-08 | 28 |
fibroblast of tunica adventitia of artery | 8.35e-08 | 4 |
fibroblast of the aortic adventitia | 8.35e-08 | 4 |
omentum preadipocyte | 9.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.48e-11 | 6 |
peritoneum | 3.48e-11 | 6 |
abdominal cavity | 3.48e-11 | 6 |
visceral peritoneum | 3.48e-11 | 6 |
connective tissue | 4.99e-11 | 371 |
cavity lining | 7.19e-09 | 12 |
serous membrane | 7.19e-09 | 12 |
right ovary | 7.32e-08 | 5 |
artery wall | 8.35e-08 | 4 |
tunica adventitia of artery | 8.35e-08 | 4 |
adventitia | 8.35e-08 | 4 |
tunica adventitia of blood vessel | 8.35e-08 | 4 |
aorta tunica adventitia | 8.35e-08 | 4 |
aorta wall | 8.35e-08 | 4 |
integument | 9.39e-08 | 46 |
integumental system | 9.39e-08 | 46 |
skin of body | 3.02e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.00e-10 | 14 |
musculoskeletal system disease | 2.20e-09 | 5 |
myotonic disease | 2.20e-09 | 5 |
muscle tissue disease | 2.20e-09 | 5 |
myopathy | 2.20e-09 | 5 |
muscular disease | 2.20e-09 | 5 |
myotonic dystrophy | 2.20e-09 | 5 |