FFCP PHASE1:Hg19::chr5:103552623..103552625,+: Difference between revisions
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|id=chr5:103552623..103552625,+
|short_description=p@chr5:103552623..103552625,+
|description=CAGE_peak_at_chr5:103552623..103552625,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:103552623..103552625,+ | |||
|coexpression_cluster_id=C4445 | |||
|description=CAGE_peak_at_chr5:103552623..103552625,+ | |||
|id=chr5:103552623..103552625,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.63e-12!254;CL:0000039!1.45e-10!7;CL:0000586!1.45e-10!7;CL:0000223!2.60e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.40e-08;7!CL:0000586;6.40e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.60e-12,253;CL:0000039,5.29e-08,7;CL:0000586,5.29e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.79e-09;30 | |||
|ontology_enrichment_disease=DOID:162!2.52e-45!235;DOID:0050687!4.53e-44!143;DOID:14566!9.31e-44!239;DOID:305!5.54e-40!106;DOID:0050686!3.18e-18!137;DOID:299!3.93e-16!25;DOID:7!3.34e-11!39;DOID:3095!3.82e-08!22;DOID:2994!3.82e-08!22;DOID:3119!6.12e-08!14;DOID:1036!6.33e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:299;2.96e-16;25!DOID:305;2.86e-15;106!DOID:3119;1.06e-10;14!DOID:1036;6.61e-10;8!DOID:0050687;2.99e-09;143!DOID:3095;9.48e-09;22!DOID:2994;9.48e-09;22!DOID:162;1.21e-07;235!DOID:4468;1.29e-07;2!DOID:1324;1.76e-07;15!DOID:0050615;5.71e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.47e-38,106;DOID:0050687,1.11e-34,143;DOID:162,4.84e-34,235;DOID:14566,4.45e-33,239;DOID:0050686,1.16e-17,137;DOID:299,3.60e-16,25;DOID:3119,1.36e-10,14;DOID:1036,4.43e-10,8;DOID:3095,7.49e-09,22;DOID:2994,7.49e-09,22;DOID:4468,9.43e-08,2;DOID:1324,1.58e-07,15;DOID:0050615,5.17e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0005911!9.57e-08!82;UBERON:0002294!1.75e-07!7;UBERON:0001173!1.75e-07!7;UBERON:0004912!1.75e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr5:103552623..103552625,+ | |||
}} | }} |
Latest revision as of 08:25, 30 July 2015
Short description: | p@chr5:103552623..103552625, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:103552623..103552625, + |
Coexpression cluster: | C4445_glioblastoma_somatostatinoma_small_teratocarcinoma_transitionalcell_hepatoblastoma_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.60e-12 | 253 |
germ line cell | 5.29e-08 | 7 |
germ cell | 5.29e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.47e-38 | 106 |
cell type cancer | 1.11e-34 | 143 |
cancer | 4.84e-34 | 235 |
disease of cellular proliferation | 4.45e-33 | 239 |
organ system cancer | 1.16e-17 | 137 |
adenocarcinoma | 3.60e-16 | 25 |
gastrointestinal system cancer | 1.36e-10 | 14 |
chronic leukemia | 4.43e-10 | 8 |
germ cell and embryonal cancer | 7.49e-09 | 22 |
germ cell cancer | 7.49e-09 | 22 |
clear cell adenocarcinoma | 9.43e-08 | 2 |
lung cancer | 1.58e-07 | 15 |
respiratory system cancer | 5.17e-07 | 16 |