FFCP PHASE1:Hg19::chr4:88902619..88902651,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:88902619..88902651,+
|short_description=p@chr4:88902619..88902651,+
|description=CAGE_peak_at_chr4:88902619..88902651,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:88902619..88902651,+ | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_at_chr4:88902619..88902651,+ | |||
|id=chr4:88902619..88902651,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.25e-28;6!CL:0000319;2.27e-08;1!CL:0002553;8.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.32e-28,6;CL:0000319,2.19e-08,1;CL:0002553,7.10e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.57e-08;1!UBERON:0006222;8.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.19e-14;2!DOID:3030;2.27e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.28e-14,2;DOID:3030,2.19e-08,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002148;6.03e-14;2!UBERON:0006331;6.03e-14;2!UBERON:0009662;6.03e-14;2!UBERON:0000125;6.94e-12;9!UBERON:0002308;6.94e-12;9!UBERON:0002298;2.67e-10;6!UBERON:0000988;1.33e-09;3!UBERON:0004732;2.85e-08;13!UBERON:0002038;3.57e-08;1!UBERON:0000941;3.57e-08;1!UBERON:0001785;3.57e-08;1!UBERON:0002464;3.57e-08;1!UBERON:0004904;3.57e-08;1!UBERON:0001021;3.57e-08;1!UBERON:0009661;3.57e-08;1!UBERON:0002950;3.57e-08;1!UBERON:0001891;3.57e-08;1!UBERON:0000073;4.65e-07;53!UBERON:0002616;4.65e-07;53!UBERON:0003528;4.87e-07;34!UBERON:0002020;4.87e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,6.45e-14,2;UBERON:0006331,6.45e-14,2;UBERON:0009662,6.45e-14,2;UBERON:0001049,5.29e-12,56;UBERON:0005068,5.29e-12,56;UBERON:0006241,5.29e-12,56;UBERON:0007135,5.29e-12,56;UBERON:0000125,6.56e-12,9;UBERON:0002308,6.56e-12,9;UBERON:0000073,1.81e-10,53;UBERON:0002616,1.81e-10,53;UBERON:0002298,2.50e-10,6;UBERON:0000988,1.40e-09,3;UBERON:0003075,3.07e-09,82;UBERON:0007284,3.07e-09,82;UBERON:0002346,1.03e-08,86;UBERON:0003528,1.95e-08,34;UBERON:0002020,1.95e-08,34;UBERON:0002038,2.52e-08,1;UBERON:0009661,2.52e-08,1;UBERON:0002950,2.52e-08,1;UBERON:0001891,2.52e-08,1;UBERON:0009616,2.52e-08,1;UBERON:0010286,2.52e-08,1;UBERON:0004732,2.54e-08,13;UBERON:0000941,2.71e-08,1;UBERON:0001785,2.71e-08,1;UBERON:0002464,2.71e-08,1;UBERON:0004904,2.71e-08,1;UBERON:0001021,2.71e-08,1;UBERON:0003902,2.71e-08,1;UBERON:0005425,2.71e-08,1;UBERON:0001016,4.00e-08,89;UBERON:0000955,1.06e-07,68;UBERON:0006238,1.06e-07,68;UBERON:0001017,1.21e-07,81;UBERON:0003076,3.44e-07,15;UBERON:0003057,3.44e-07,15;UBERON:0002780,6.68e-07,41;UBERON:0001890,6.68e-07,41;UBERON:0003080,6.68e-07,41;UBERON:0006240,6.68e-07,41;UBERON:0010371,7.42e-07,104 | |||
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| ||
|short_description=p@chr4:88902619..88902651,+ | |||
}} | }} |
Latest revision as of 07:52, 30 July 2015
Short description: | p@chr4:88902619..88902651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88902619..88902651, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.32e-28 | 6 |
mucus secreting cell | 2.19e-08 | 1 |
lung fibroblast | 7.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.28e-14 | 2 |
mucinous adenocarcinoma | 2.19e-08 | 1 |