FFCP PHASE1:Hg19::chr4:74274392..74274395,+: Difference between revisions
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|id=chr4:74274392..74274395,+
|short_description=p44@ALB
|description=CAGE_peak_44_at_ALB_5end
|association_with_transcript=37bp_to_ENST00000505649_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000505649_5end | |||
|cluster_id=chr4:74274392..74274395,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_44_at_ALB_5end | |||
|id=chr4:74274392..74274395,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.58e-41!12;CL:0000417!3.58e-41!12;CL:0000668!3.58e-41!12;CL:0000414!3.58e-41!12;CL:0000412!3.58e-41!12;CL:0000182!3.58e-41!12;CL:0000223!5.41e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.54e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.54e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.52e-13;11!UBERON:0009497;3.21e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.91e-51!19;UBERON:0006925!9.91e-51!19;UBERON:0008836!9.91e-51!19;UBERON:0008835!8.01e-44!22;UBERON:0003894!8.01e-44!22;UBERON:0009854!6.41e-42!23;UBERON:0007499!1.44e-38!25;UBERON:0009497!1.44e-38!25;UBERON:0000015!1.44e-38!25;UBERON:0002423!1.44e-38!25;UBERON:0006235!1.44e-38!25;UBERON:0004161!1.44e-38!25;UBERON:0005057!4.37e-37!26;UBERON:0009856!4.37e-37!26;UBERON:0002365!4.19e-31!31;UBERON:0002330!4.19e-31!31;UBERON:0002368!1.52e-27!35;UBERON:0003929!3.96e-23!54;UBERON:0000949!2.09e-21!45;UBERON:0005172!1.72e-17!55;UBERON:0005173!1.72e-17!55;UBERON:0002530!2.70e-16!59;UBERON:0002417!9.37e-16!61;UBERON:0000916!9.37e-16!61;UBERON:0005911!3.84e-15!82;UBERON:0001041!1.02e-09!98;UBERON:0004921!2.05e-09!129;UBERON:0004185!2.05e-09!129;UBERON:0005177!7.11e-09!107;UBERON:0000490!7.65e-09!138;UBERON:0009569!2.19e-08!113;UBERON:0002405!3.67e-08!115;UBERON:0003914!5.12e-08!118;UBERON:0001007!9.07e-08!155;UBERON:0001555!9.07e-08!155;UBERON:0007026!9.07e-08!155;UBERON:0000466!1.74e-07!126;UBERON:0000077!3.03e-07!130;UBERON:0004119!4.35e-07!169;UBERON:0000925!4.35e-07!169;UBERON:0006595!4.35e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;1.77e-17;31!UBERON:0002330;1.77e-17;31!UBERON:0002368;1.08e-14;33!UBERON:0000949;1.30e-10;43!UBERON:0005172;2.94e-08;52!UBERON:0005173;2.94e-08;52!UBERON:0002417;4.35e-07;58!UBERON:0000916;4.35e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p44@ALB | |||
}} | }} |
Latest revision as of 12:38, 18 September 2015
Short description: | p44@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 37bp_to_ENST00000505649_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.54e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 5.11e-07 | 82 |