FFCP PHASE1:Hg19::chr4:57774274..57774299,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:57774274..57774299,+
|short_description=p8@REST
|description=CAGE_peak_8_at_REST_5end
|association_with_transcript=199bp_to_ENST00000309042_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5978 | |EntrezGene=5978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9966 | |HGNC=9966 | ||
|TSSclassifier=strong | |||
|UniProt=Q13127 | |UniProt=Q13127 | ||
|association_with_transcript=199bp_to_ENST00000309042_5end | |||
|cluster_id=chr4:57774274..57774299,+ | |||
|description=CAGE_peak_8_at_REST_5end | |||
|id=chr4:57774274..57774299,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.89e-18;5!CL:0000775;1.55e-17;3!CL:0000047;3.94e-12;2!CL:0000163;4.45e-10;9!CL:0000039;1.17e-07;7!CL:0000586;1.17e-07;7!CL:0000094;7.36e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.43e-18,5;CL:0002028,2.43e-18,5;CL:0000775,1.28e-17,3;CL:0000163,3.05e-10,9;CL:0000766,3.79e-10,72;CL:0000039,9.99e-08,7;CL:0000586,9.99e-08,7;CL:0000094,6.88e-07,8;CL:0000511,7.82e-07,1;CL:0002625,7.82e-07,1;CL:0000216,7.82e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!3.35e-07!22;UBERON:0000079!3.35e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.95e-12;11!UBERON:0000473;2.17e-11;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.57e-12,11;UBERON:0000473,1.29e-11,8;UBERON:0002405,3.14e-07,93;UBERON:0001831,6.99e-07,1;UBERON:0001567,6.99e-07,1;UBERON:0008801,6.99e-07,1;UBERON:0001136,7.82e-07,1;UBERON:0001343,7.82e-07,1;UBERON:0004910,7.82e-07,1;UBERON:0005154,7.82e-07,1;UBERON:0005295,7.82e-07,1;UBERON:0004813,7.82e-07,1;UBERON:0005297,7.82e-07,1;UBERON:0005294,7.82e-07,1;UBERON:0010141,7.82e-07,1;UBERON:0005891,7.82e-07,1 | |||
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| ||
|short_description=p8@REST | |||
}} | }} |
Latest revision as of 03:13, 18 September 2015
Short description: | p8@REST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_REST_5end |
Coexpression cluster: | NA |
Association with transcript: | 199bp_to_ENST00000309042_5end |
EntrezGene: | REST |
HGNC: | 9966 |
UniProt: | Q13127 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.43e-18 | 5 |
basophil mast progenitor cell | 2.43e-18 | 5 |
neutrophil | 1.28e-17 | 3 |
endocrine cell | 3.05e-10 | 9 |
myeloid leukocyte | 3.79e-10 | 72 |
germ line cell | 9.99e-08 | 7 |
germ cell | 9.99e-08 | 7 |
granulocyte | 6.88e-07 | 8 |
androgen binding protein secreting cell | 7.82e-07 | 1 |
seminiferous tubule epithelial cell | 7.82e-07 | 1 |
Sertoli cell | 7.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.57e-12 | 11 |
testis | 1.29e-11 | 8 |
immune system | 3.14e-07 | 93 |
parotid gland | 6.99e-07 | 1 |
cheek | 6.99e-07 | 1 |
parotid gland primordium | 6.99e-07 | 1 |
mesothelium | 7.82e-07 | 1 |
seminiferous tubule of testis | 7.82e-07 | 1 |
epithelium of male gonad | 7.82e-07 | 1 |
epithelial cord | 7.82e-07 | 1 |
sex cord | 7.82e-07 | 1 |
seminiferous tubule epithelium | 7.82e-07 | 1 |
testis sex cord | 7.82e-07 | 1 |
genital ridge | 7.82e-07 | 1 |
primitive sex cord of indifferent gonad | 7.82e-07 | 1 |
coelomic epithelium | 7.82e-07 | 1 |