FFCP PHASE1:Hg19::chr4:165675511..165675518,+: Difference between revisions
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|id=chr4:165675511..165675518,+
|short_description=p6@LOC100505989
|description=CAGE_peak_6_at_LOC100505989_5end
|association_with_transcript=228bp_to_ENST000005073...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100505989 | |EntrezGene=100505989 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_ENST00000507311,NR_038834,uc003iqu.1_5end | |||
|cluster_id=chr4:165675511..165675518,+ | |||
|coexpression_cluster_id=C1048 | |||
|description=CAGE_peak_6_at_LOC100505989_5end | |||
|id=chr4:165675511..165675518,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.15e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.34e-24!2;UBERON:0003126!1.25e-07!7;UBERON:0001005!1.25e-07!7;UBERON:0000160!5.10e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.81e-12;17!UBERON:0002108;3.26e-11;4!UBERON:0005409;1.17e-09;22!UBERON:0001871;2.18e-08;6!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.81e-12,17;UBERON:0002108,2.94e-11,4;UBERON:0005409,1.15e-08,25;UBERON:0001871,2.18e-08,6;UBERON:0001155,8.85e-07,9 | |||
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|short_description=p6@LOC100505989 | |||
}} | }} |
Latest revision as of 13:53, 16 September 2015
Short description: | p6@LOC100505989 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LOC100505989_5end |
Coexpression cluster: | C1048_signet_small_colon_duodenum_temporal_trachea_gall |
Association with transcript: | 228bp_to_ENST00000507311, NR_038834, uc003iqu.1_5end |
EntrezGene: | LOC100505989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.81e-12 | 17 |
small intestine | 2.94e-11 | 4 |
gastrointestinal system | 1.15e-08 | 25 |
temporal lobe | 2.18e-08 | 6 |
colon | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |