FFCP PHASE1:Hg19::chr4:134073396..134073407,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:134073396..134073407,+
|short_description=p14@PCDH10
|description=CAGE_peak_14_at_PCDH10_5end
|association_with_transcript=8bp_to_AL157470_5end
|EntrezGen...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57575 | |EntrezGene=57575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13404 | |HGNC=13404 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSR3 | |UniProt=Q9NSR3 | ||
|association_with_transcript=8bp_to_AL157470_5end | |||
|cluster_id=chr4:134073396..134073407,+ | |||
|description=CAGE_peak_14_at_PCDH10_5end | |||
|id=chr4:134073396..134073407,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.44e-21;2!CL:0002605;1.83e-14;3!CL:0000128;6.04e-07;7!CL:0000126;6.04e-07;7!CL:0000127;6.04e-07;7!CL:0002319;6.92e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.83e-14,3;CL:0000128,6.04e-07,7;CL:0000126,6.04e-07,7;CL:0000127,6.04e-07,7;CL:0002453,6.04e-07,7;CL:0002319,7.03e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.66e-11;4!DOID:1612;2.66e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.62e-45!57;UBERON:0005068!1.62e-45!57;UBERON:0006241!1.62e-45!57;UBERON:0007135!1.62e-45!57;UBERON:0002346!1.66e-42!90;UBERON:0002616!4.11e-41!59;UBERON:0003075!4.52e-41!86;UBERON:0007284!4.52e-41!86;UBERON:0005743!7.57e-41!86;UBERON:0001017!1.91e-39!82;UBERON:0000073!1.68e-37!94;UBERON:0001016!1.68e-37!94;UBERON:0002780!2.66e-37!41;UBERON:0001890!2.66e-37!41;UBERON:0006240!2.66e-37!41;UBERON:0000955!4.77e-37!69;UBERON:0006238!4.77e-37!69;UBERON:0003080!3.23e-36!42;UBERON:0003056!7.38e-34!61;UBERON:0000033!3.71e-31!123;UBERON:0001893!1.75e-30!34;UBERON:0000153!2.32e-30!129;UBERON:0007811!2.32e-30!129;UBERON:0002020!3.49e-30!34;UBERON:0003528!3.49e-30!34;UBERON:0001869!9.77e-30!32;UBERON:0002791!9.55e-29!33;UBERON:0000924!5.00e-27!173;UBERON:0006601!5.00e-27!173;UBERON:0004121!1.17e-25!169;UBERON:0000956!1.31e-23!25;UBERON:0000203!1.31e-23!25;UBERON:0007023!2.37e-23!115;UBERON:0002619!2.84e-21!22;UBERON:0001950!1.23e-20!20;UBERON:0000025!5.39e-15!194;UBERON:0000200!1.13e-13!6;UBERON:0004111!3.88e-12!241;UBERON:0000477!1.50e-11!286;UBERON:0004733!1.18e-10!12;UBERON:0002028!1.18e-10!12;UBERON:0007277!1.18e-10!12;UBERON:0003076!2.58e-10!15;UBERON:0003057!2.58e-10!15;UBERON:0000483!1.03e-09!309;UBERON:0004732!1.04e-09!13;UBERON:0002298!1.07e-09!8;UBERON:0000119!1.77e-09!312;UBERON:0000475!1.99e-09!365;UBERON:0001894!3.59e-08!7;UBERON:0006222!3.59e-08!7;UBERON:0002308!5.27e-08!9;UBERON:0000125!5.27e-08!9;UBERON:0001896!1.48e-07!3;UBERON:0002771!1.48e-07!3;UBERON:0005290!1.48e-07!3;UBERON:0010096!1.48e-07!3;UBERON:0000064!1.87e-07!219;UBERON:0000988!2.43e-07!3;UBERON:0002021!2.47e-07!5;UBERON:0001871!5.30e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;2.21e-40;1!UBERON:0005403;2.21e-40;1!UBERON:0002702;5.69e-21;2!UBERON:0001870;1.83e-14;3!UBERON:0003528;5.25e-12;34!UBERON:0002791;5.25e-12;32!UBERON:0002020;5.25e-12;34!UBERON:0001869;5.25e-12;32!UBERON:0000369;3.42e-11;4!UBERON:0002435;3.42e-11;4!UBERON:0000204;3.42e-11;4!UBERON:0001893;2.40e-10;34!UBERON:0000349;3.22e-09;5!UBERON:0000073;2.65e-08;53!UBERON:0002616;2.65e-08;53!UBERON:0000200;6.78e-08;6!UBERON:0002780;2.08e-07;41!UBERON:0001890;2.08e-07;41!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25!UBERON:0009663;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,3.30e-40,1;UBERON:0005403,3.30e-40,1;UBERON:0002702,4.66e-21,2;UBERON:0001870,1.60e-14,3;UBERON:0002791,1.43e-11,32;UBERON:0001869,1.43e-11,32;UBERON:0000369,3.79e-11,4;UBERON:0002435,3.79e-11,4;UBERON:0000204,3.79e-11,4;UBERON:0010082,3.79e-11,4;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0000349,3.49e-09,5;UBERON:0001017,2.75e-08,81;UBERON:0000200,6.34e-08,6;UBERON:0001016,1.56e-07,89;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0000956,4.28e-07,25;UBERON:0000203,4.28e-07,25;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56;UBERON:0009663,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.14494394852423,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0.886642856860642,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.67401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0.2249738915515,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,0.500763722825999,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,1.02766760154335,0,0.319267718114302,0.615349092722265,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.380494861163441,0,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.747667062745149,0.526182188502793,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.14494394852423,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0.886642856860642,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.67401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0.2249738915515,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,0.500763722825999,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,1.02766760154335,0,0.319267718114302,0.615349092722265,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.380494861163441,0,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.747667062745149,0.526182188502793,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@PCDH10 | |||
}} | }} |
Latest revision as of 04:17, 25 September 2015
Short description: | p14@PCDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PCDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_AL157470_5end |
EntrezGene: | PCDH10 |
HGNC: | 13404 |
UniProt: | Q9NSR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.83e-14 | 3 |
oligodendrocyte | 6.04e-07 | 7 |
macroglial cell | 6.04e-07 | 7 |
astrocyte | 6.04e-07 | 7 |
oligodendrocyte precursor cell | 6.04e-07 | 7 |
neural cell | 7.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 3.30e-40 | 1 |
ventral striatum | 3.30e-40 | 1 |
middle frontal gyrus | 4.66e-21 | 2 |
frontal cortex | 1.60e-14 | 3 |
regional part of telencephalon | 1.43e-11 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
corpus striatum | 3.79e-11 | 4 |
striatum | 3.79e-11 | 4 |
ventral part of telencephalon | 3.79e-11 | 4 |
future corpus striatum | 3.79e-11 | 4 |
brain grey matter | 5.87e-11 | 34 |
gray matter | 5.87e-11 | 34 |
telencephalon | 5.87e-11 | 34 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
limbic system | 3.49e-09 | 5 |
central nervous system | 2.75e-08 | 81 |
gyrus | 6.34e-08 | 6 |
nervous system | 1.56e-07 | 89 |
regional part of nervous system | 2.27e-07 | 53 |
regional part of brain | 2.27e-07 | 53 |
cerebral cortex | 4.28e-07 | 25 |
pallium | 4.28e-07 | 25 |
neural tube | 5.09e-07 | 56 |
neural rod | 5.09e-07 | 56 |
future spinal cord | 5.09e-07 | 56 |
neural keel | 5.09e-07 | 56 |
telencephalic nucleus | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |