FFCP PHASE1:Hg19::chr4:109087445..109087463,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:109087445..109087463,-
|short_description=p1@LEF1
|description=CAGE_peak_1_at_LEF1_5end
|association_with_transcript=0bp_to_ENST00000512172_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIV1 | |UniProt=D6RIV1 | ||
|association_with_transcript=0bp_to_ENST00000512172_5end | |||
|cluster_id=chr4:109087445..109087463,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_LEF1_5end | |||
|id=chr4:109087445..109087463,- | |||
|ontology_enrichment_celltype=CL:0000791!2.92e-18!18;CL:0000789!2.92e-18!18;CL:0002420!2.92e-18!18;CL:0002419!2.92e-18!18;CL:0000790!2.92e-18!18;CL:0000084!7.95e-17!25;CL:0000827!7.95e-17!25;CL:0000738!2.75e-15!140;CL:0002087!4.16e-14!119;CL:0000625!3.04e-13!11;CL:0000542!4.47e-13!53;CL:0000051!4.47e-13!53;CL:0000037!9.95e-13!172;CL:0000566!9.95e-13!172;CL:0000838!1.85e-12!52;CL:0000988!6.48e-11!182;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0002031!2.11e-10!124;CL:0000624!4.11e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.08e-32;18!CL:0000789;1.08e-32;18!CL:0002419;1.08e-32;18!CL:0000084;1.39e-31;25!CL:0000625;5.67e-23;11!CL:0000624;1.46e-13;6!CL:0000542;2.73e-10;53!CL:0000898;1.07e-07;3!CL:0000226;2.20e-07;3!CL:0000842;2.20e-07;3!CL:0000623;7.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.11e-32,18;CL:0000789,1.11e-32,18;CL:0002420,1.11e-32,18;CL:0002419,1.11e-32,18;CL:0000790,1.11e-32,18;CL:0000084,1.41e-31,25;CL:0000827,1.41e-31,25;CL:0000625,5.80e-23,11;CL:0000542,3.52e-19,53;CL:0000051,3.52e-19,53;CL:0000838,4.09e-18,52;CL:0000738,3.46e-14,136;CL:0002087,1.35e-13,115;CL:0000624,1.46e-13,6;CL:0000037,1.34e-11,168;CL:0000988,1.88e-10,177;CL:0002031,4.05e-09,120;CL:0002032,9.81e-09,161;CL:0000837,9.81e-09,161;CL:0000898,1.08e-07,3;CL:0000226,2.20e-07,3;CL:0000842,2.20e-07,3;CL:0000623,7.58e-07,3;CL:0000825,7.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.08e-32;18!CL:0000051;2.73e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-20!115;UBERON:0000178!1.65e-10!15;UBERON:0000179!1.65e-10!15;UBERON:0000463!1.65e-10!15;UBERON:0002390!3.19e-08!102;UBERON:0003061!3.19e-08!102;UBERON:0002193!1.20e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-19;15!UBERON:0000179;3.66e-19;15!UBERON:0000463;3.66e-19;15!UBERON:0002390;1.06e-12;32!UBERON:0002193;8.66e-09;42!UBERON:0004177;2.30e-07;5!UBERON:0005057;2.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.85e-19,15;UBERON:0000179,3.85e-19,15;UBERON:0000463,3.85e-19,15;UBERON:0004177,6.86e-08,7;UBERON:0005057,6.86e-08,7;UBERON:0003408,3.49e-07,10;UBERON:0002193,9.18e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,0,2.16742572642506,0,0,0,0,0,0,5.53995408531877,3.60980005446255,8.02940221648652,0.447830948479849,5.50619232232265,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.929119112685311,0,0.768482119587302,0,0,1.29096936716765,0,0,1.09162460023138,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,1.13477044938228,1.24564449799115,0,0,0.217188844705117,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0,0,3.92355994087075,0,83.7983620684929,31.8338717826823,35.3634578279156,29.9263826749314,77.8954217254281,69.5968274430058,111.051235192509,2.78526142212934,40.6556152315275,41.6483721817208,61.2016732108935,0.896639238079726,0.650296737799391,26.8033784503992,13.8175008892924,68.3935282334724,212.791218137557,250.418215091971,208.025692371904,24.2481993372792,53.650869104269,53.9495089407729,89.568970974904,49.377639220235,55.993177031652,39.9189858668317,107.360059902452,116.595802761675,43.7257542933211,51.6174409455957,36.129631864526,24.1928091869679,5.34880391567015,34.9026813357546,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.43917392846563,0.523916301990851,0,0,0.649094787309367,0.174129737299267,0.26591592103773,0.476981248610684,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6951014619523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8852605814043,12.937654491571,17.839682042885,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.3386962548324,30.8471307170622,29.8837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0,0,0,0,0,59.3713702801638,51.2306928785391,33.0395368561014,45.9787326633533,31.674895027637,49.9324449618392,79.924652711241,29.345631522888,0,0,0,1.30062222588003,8.51188356561025,209.797296034473,25.5082036366116,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.796991953004279,12.1564922833705,0,0,0,0,0,0,0,0.591860433821602,26.3431401581634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0.692552326534174,0,0,0,0,0,0,0,92.9959013581202,3.45356564069054,0.664846727600626,0,0,0,0,1.43042921082341,0,0,0,0.649165919226273,0,0.353830258013357,8.55442202907076,0,0,0,0.202203398942031,0,0,0,0,0,0,19.3585145677862,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.90392296312213,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.86686278029118,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0.387848869084652,0,0,0,1.06787412567695,5.34494637338864,2.48543433208317,33.7392894832127,14.6232607604479,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.18628920882415,0,0,0.151649117541648,1.7127920012698,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5642201402156,0,0,0,0.385375350578757,0,0.319267718114302,0.41023272848151,0.504143392443436,0.138314504928436,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,2.19303106742873,0,0,0,0.535701835878287,0,0,0,0.975726071789027,0,0,0.271878931907327,0.263091094251396,0,0,0.39246546425257,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,2.15113679410139,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0.397901550322736,0,0.90356865631168,0,2.11347980993343,0.231522474323834,1.31135736302374,0,0,0,0,0,0.8453114551668,0,4.69919589899268,12.5692881548476,0.89947040332436,0,0,0,2.19100916473955,4.58729283404541,0,0.631086248772738,0.0679914901909147,0,12.1676173318542,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.20686599172379,1.27940389140589,6.66580408098473,157.532351090019,180.513269172355,0,0.12729431655633,1.0105859447911,0.217716747896961,0,12.4601298076987,1.5778885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| ||
|short_description=p1@LEF1 | |||
}} | }} |
Latest revision as of 14:44, 24 September 2015
Short description: | p1@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000512172_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | D6RIV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.11e-32 | 18 |
alpha-beta T cell | 1.11e-32 | 18 |
immature T cell | 1.11e-32 | 18 |
mature T cell | 1.11e-32 | 18 |
immature alpha-beta T cell | 1.11e-32 | 18 |
T cell | 1.41e-31 | 25 |
pro-T cell | 1.41e-31 | 25 |
CD8-positive, alpha-beta T cell | 5.80e-23 | 11 |
lymphocyte | 3.52e-19 | 53 |
common lymphoid progenitor | 3.52e-19 | 53 |
lymphoid lineage restricted progenitor cell | 4.09e-18 | 52 |
leukocyte | 3.46e-14 | 136 |
nongranular leukocyte | 1.35e-13 | 115 |
CD4-positive, alpha-beta T cell | 1.46e-13 | 6 |
hematopoietic stem cell | 1.34e-11 | 168 |
hematopoietic cell | 1.88e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 4.05e-09 | 120 |
hematopoietic oligopotent progenitor cell | 9.81e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.81e-09 | 161 |
naive T cell | 1.08e-07 | 3 |
single nucleate cell | 2.20e-07 | 3 |
mononuclear cell | 2.20e-07 | 3 |
natural killer cell | 7.58e-07 | 3 |
pro-NK cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.85e-19 | 15 |
haemolymphatic fluid | 3.85e-19 | 15 |
organism substance | 3.85e-19 | 15 |
hemopoietic organ | 6.86e-08 | 7 |
immune organ | 6.86e-08 | 7 |
gland of gut | 3.49e-07 | 10 |
hemolymphoid system | 9.18e-07 | 108 |