FFCP PHASE1:Hg19::chr3:98620631..98620663,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:98620631..98620663,-
|short_description=p13@DCBLD2
|description=CAGE_peak_13_at_DCBLD2_5end
|association_with_transcript=-98bp_to_ENST00000326840,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131566 | |EntrezGene=131566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24627 | |HGNC=24627 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PD2,E7ET90 | |UniProt=Q96PD2,E7ET90 | ||
|association_with_transcript=-98bp_to_ENST00000326840,ENST00000404023,NM_080927,uc003dtd.2,uc003dte.2,uc003dtf.1_5end | |||
|cluster_id=chr3:98620631..98620663,- | |||
|coexpression_cluster_id=C2764 | |||
|description=CAGE_peak_13_at_DCBLD2_5end | |||
|id=chr3:98620631..98620663,- | |||
|ontology_enrichment_celltype=CL:0000359!1.57e-17!32;CL:0000680!5.34e-14!57;CL:0000056!5.34e-14!57;CL:0000355!5.34e-14!57;CL:0000055!1.52e-13!180;CL:0000192!5.01e-13!42;CL:0000514!5.01e-13!42;CL:0002321!1.78e-12!248;CL:0000220!1.99e-12!246;CL:0000187!3.37e-12!54;CL:0000183!3.95e-12!59;CL:0000012!1.08e-11!682;CL:0000548!1.63e-11!679;CL:0000004!1.63e-11!679;CL:0000255!1.63e-11!679;CL:0000393!7.56e-10!60;CL:0000211!7.56e-10!60;CL:0000144!5.27e-09!625;CL:0002371!5.91e-09!591;CL:0000222!6.68e-09!119;CL:0000003!1.27e-08!722;CL:0002539!1.41e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.06e-20;32!CL:0002595;2.24e-12;5!CL:0000192;2.20e-11;43!CL:0000306;1.16e-10;4!CL:0002222;1.16e-10;4!CL:0002224;1.16e-10;4!CL:0000569;1.80e-09;4!CL:0000064;3.73e-09;3!CL:0000067;3.73e-09;3!CL:0005012;3.73e-09;3!CL:0002304;3.73e-09;3!CL:0002539;2.88e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.06e-22,32;CL:0000192,1.49e-15,43;CL:0000514,1.49e-15,43;CL:0000680,6.74e-13,58;CL:0000056,6.74e-13,58;CL:0000355,6.74e-13,58;CL:0002595,9.11e-13,5;CL:0000187,4.51e-11,55;CL:0000306,1.42e-10,4;CL:0002222,1.42e-10,4;CL:0002224,1.42e-10,4;CL:0000569,1.28e-09,4;CL:0000011,1.28e-09,4;CL:0000393,1.63e-09,61;CL:0000211,1.63e-09,61;CL:0000064,3.34e-09,3;CL:0000067,3.34e-09,3;CL:0005012,3.34e-09,3;CL:0002304,3.34e-09,3;CL:0002539,2.94e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.20e-11;43!CL:0000011;1.80e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!8.64e-12!14;DOID:120!4.83e-09!27;DOID:193!5.47e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.78e-23;14!DOID:120;1.85e-10;27!DOID:193;1.51e-09;29!DOID:0060084;2.94e-08;3!DOID:127;2.94e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.56e-23,14;DOID:120,1.36e-10,27;DOID:193,1.14e-09,29;DOID:0060084,4.48e-08,3;DOID:127,4.48e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!5.71e-18!42;UBERON:0003509!5.71e-18!42;UBERON:0004572!5.71e-18!42;UBERON:0004573!3.78e-15!33;UBERON:0004571!3.78e-15!33;UBERON:0000119!8.51e-14!312;UBERON:0000483!6.05e-13!309;UBERON:0003914!2.14e-12!118;UBERON:0002049!2.98e-12!79;UBERON:0007798!2.98e-12!79;UBERON:0001134!3.06e-12!61;UBERON:0002036!3.06e-12!61;UBERON:0003082!3.06e-12!61;UBERON:0005256!7.21e-12!143;UBERON:0000486!1.07e-11!82;UBERON:0002385!1.86e-11!63;UBERON:0001015!1.86e-11!63;UBERON:0000383!1.86e-11!63;UBERON:0001981!2.83e-11!60;UBERON:0007500!2.83e-11!60;UBERON:0004537!2.83e-11!60;UBERON:0006965!2.83e-11!60;UBERON:0000914!3.78e-11!83;UBERON:0002329!3.78e-11!83;UBERON:0003077!3.78e-11!83;UBERON:0003059!3.78e-11!83;UBERON:0007282!3.78e-11!83;UBERON:0009618!3.78e-11!83;UBERON:0007285!3.78e-11!83;UBERON:0004290!4.77e-11!70;UBERON:0000055!2.62e-10!69;UBERON:0000490!4.04e-10!138;UBERON:0007625!7.67e-10!11;UBERON:0004872!5.23e-09!84;UBERON:0000475!7.71e-09!365;UBERON:0004535!1.06e-08!110;UBERON:0001009!4.34e-08!113;UBERON:0004237!1.41e-07!10;UBERON:0004695!1.41e-07!10;UBERON:0002111!1.41e-07!10;UBERON:0004178!1.41e-07!10;UBERON:0000481!1.70e-07!347;UBERON:0000947!2.66e-07!21;UBERON:0010191!2.66e-07!21;UBERON:0000992!5.49e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.39e-21;11!UBERON:0004573;4.18e-19;33!UBERON:0004571;4.18e-19;33!UBERON:0001637;3.54e-15;42!UBERON:0003509;3.54e-15;42!UBERON:0004572;3.54e-15;42!UBERON:0003834;2.24e-12;5!UBERON:0001533;2.24e-12;5!UBERON:0010371;5.80e-12;31!UBERON:0000019;1.64e-11;19!UBERON:0000047;1.64e-11;19!UBERON:0004088;1.64e-11;19!UBERON:0010230;1.64e-11;19!UBERON:0000488;2.46e-11;4!UBERON:0000992;5.32e-11;13!UBERON:0001801;7.07e-11;14!UBERON:0000970;8.02e-11;20!UBERON:0010077;1.16e-10;4!UBERON:0005389;1.16e-10;4!UBERON:0000484;1.16e-10;4!UBERON:0000965;1.16e-10;4!UBERON:0001803;1.16e-10;4!UBERON:0002119;2.59e-10;4!UBERON:0002104;3.36e-10;21!UBERON:0001456;3.36e-10;21!UBERON:0001778;3.73e-09;3!UBERON:0001775;3.73e-09;3!UBERON:0000020;4.04e-09;23!UBERON:0003513;1.02e-08;7!UBERON:0001032;1.19e-08;24!UBERON:0004456;1.19e-08;24!UBERON:0002049;1.85e-08;75!UBERON:0007798;1.85e-08;75!UBERON:0004237;2.88e-08;10!UBERON:0004695;2.88e-08;10!UBERON:0002111;2.88e-08;10!UBERON:0004178;2.88e-08;10!UBERON:0002118;3.55e-08;5!UBERON:0000947;1.06e-07;21!UBERON:0010191;1.06e-07;21!UBERON:0007500;1.26e-07;56!UBERON:0001981;1.26e-07;56!UBERON:0004537;1.26e-07;56!UBERON:0002203;1.65e-07;6!UBERON:0001768;1.65e-07;6!UBERON:0002200;1.65e-07;6!UBERON:0000055;4.20e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.55e-22,42;UBERON:0003509,4.55e-22,42;UBERON:0004572,4.55e-22,42;UBERON:0007625,9.23e-22,11;UBERON:0004573,9.70e-22,33;UBERON:0004571,9.70e-22,33;UBERON:0002049,2.98e-14,78;UBERON:0007798,2.98e-14,78;UBERON:0007500,5.72e-14,59;UBERON:0001981,5.72e-14,59;UBERON:0004537,5.72e-14,59;UBERON:0006965,5.72e-14,59;UBERON:0003914,2.95e-13,117;UBERON:0003834,9.11e-13,5;UBERON:0001533,9.11e-13,5;UBERON:0004872,1.60e-12,83;UBERON:0004535,5.56e-12,109;UBERON:0001134,1.03e-11,62;UBERON:0002036,1.03e-11,62;UBERON:0003082,1.03e-11,62;UBERON:0001009,1.87e-11,112;UBERON:0000488,2.28e-11,4;UBERON:0000055,2.33e-11,68;UBERON:0002385,3.53e-11,64;UBERON:0001015,3.53e-11,64;UBERON:0000383,3.53e-11,64;UBERON:0000992,4.58e-11,13;UBERON:0000019,6.50e-11,20;UBERON:0000047,6.50e-11,20;UBERON:0010312,6.50e-11,20;UBERON:0004088,6.50e-11,20;UBERON:0010230,6.50e-11,20;UBERON:0003072,6.50e-11,20;UBERON:0004128,6.50e-11,20;UBERON:0003071,6.50e-11,20;UBERON:0001801,7.59e-11,14;UBERON:0010077,1.42e-10,4;UBERON:0005389,1.42e-10,4;UBERON:0000484,1.42e-10,4;UBERON:0002546,1.42e-10,4;UBERON:0000965,1.42e-10,4;UBERON:0001803,1.42e-10,4;UBERON:0003073,1.42e-10,4;UBERON:0005426,1.42e-10,4;UBERON:0000970,2.76e-10,21;UBERON:0002104,2.76e-10,21;UBERON:0002119,3.02e-10,4;UBERON:0007503,3.33e-10,78;UBERON:0001456,1.02e-09,22;UBERON:0002329,1.49e-09,71;UBERON:0003059,1.49e-09,71;UBERON:0007282,1.49e-09,71;UBERON:0004290,1.49e-09,71;UBERON:0009618,1.49e-09,71;UBERON:0003077,2.38e-09,72;UBERON:0007285,2.38e-09,72;UBERON:0000486,2.96e-09,83;UBERON:0001778,3.34e-09,3;UBERON:0001775,3.34e-09,3;UBERON:0007524,3.76e-09,73;UBERON:0003513,5.48e-09,7;UBERON:0000020,1.01e-08,24;UBERON:0001032,1.01e-08,24;UBERON:0004456,1.01e-08,24;UBERON:0002118,2.56e-08,5;UBERON:0004237,2.94e-08,10;UBERON:0004695,2.94e-08,10;UBERON:0002111,2.94e-08,10;UBERON:0004178,2.94e-08,10;UBERON:0000483,6.54e-08,306;UBERON:0000119,1.01e-07,309;UBERON:0000947,1.35e-07,21;UBERON:0010191,1.35e-07,21;UBERON:0000076,1.53e-07,8;UBERON:0002203,1.57e-07,6;UBERON:0001768,1.57e-07,6;UBERON:0002200,1.57e-07,6;UBERON:0005085,1.59e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0.738726348460727,2.04000691244253,0.626909442956176,0.286235987131057,1.09499540058307,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,6.99557647014102,5.76496433402666,5.97276542713257,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,4.63432132846266,1.14734648299525,1.06400514659507,0,0,0,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.340296549480063,0.717558542755448,0,0,0,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,2.13005755509969,0.705264687593482,0,0.773043412653187,1.36373060295417,1.43402297694502,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.122988438543114,2.40194934417936,1.64625428112938,0,0.301586917234893,0,0,0,4.3299402607582,15.4187438616852,2.46558257895225,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0.93733833986777,1.00789276919316,0.992425680696705,0.985143749731331,1.16253575405585,0.383382679165211,7.38994856843915,0.792435906119034,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.2933531432838,1.80980402060889,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,1.30294473717494,0,0,5.42590878707255,3.48613383440118,2.39935178836937,0,0,0,0,0,0,2.02693829334611,1.43833425785268,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,1.3878872442239,3.01854933032316,1.31403449622095,0,0.929683027679674,0,1.80455823272956,0.276242966807689,0,0.182091168006717,0.262248829918848,0.902399225814824,5.08301224889137,0.784349769176855,0,4.01096189792928,0,0,0.647747748306418,0,1.89662506280697,1.00337954770971,0.509752546090077,0.831076008928724,1.56712328305525,0,0,1.79515087581472,0,1.62689197332152,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.681813019328807,0,0.661139661443912,0.192190067365106,0.510450849978337,0.2023155617111,0.929691098594572,4.40737285562896,3.485186350803,1.23213432070436,1.59691809095107,3.47973196830029,2.96518750566272,1.71749864090389,0.372158369359667,0.316379424718726,0,0,0,2.54562598340749,0.78494864019923,0,0,0,2.22400729730648,0,1.26377536871694,0.48763373908959,1.70599442741899,3.16950440270266,0,0,1.13008116620243,2.75682671773062,1.99031692572366,5.26141062304515,0,0,2.23201414658974,0.6196469961995,0.281695602532241,0,0,2.49669736036875,0.709522128141196,0,0,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0.556543525114529,0,0,0.19924798825107,0,0,0.20453736500431,0,0,1.70749867179921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.632994193584081,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0,0,0,0.569219092059585,0.832048038078832,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0.959293472527256,0.794858446811959,0,0,1.04206466326994,0,0,0,0.114536596165916,0,0,2.60930324687408,0,4.07712618220842,2.71967400412066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.739202355635845,0,0.191915197319445,0,0,0,1.08599920350743,4.32110745600634,3.26587360109409,1.19730191562487,0,0.340776043570843,0.339936274560377,0,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0.37494122388632,0.151649117541648,0.285465333544967,1.6468607378872,0,0,1.04478362020812,0.467426619694449,1.10961172300523,0.757612021100357,0.251567901752575,0,1.14420034198462,1.36107831386915,2.79786961049005,1.92211694986524,2.54874827461924,1.34940933649081,2.17368139626763,4.14706207840855,5.58267600571789,1.5652351854352,1.6528336989694,2.66563648518157,6.91680246447925,1.63663793282303,3.7593694964871,0.464033759878494,1.59238355479446,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0.38582807654183,0.337884881306145,0.76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| ||
|short_description=p13@DCBLD2 | |||
}} | }} |
Latest revision as of 23:16, 19 September 2015
Short description: | p13@DCBLD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DCBLD2_5end |
Coexpression cluster: | C2764_Smooth_Lens_Renal_Ciliary_Mesothelial_mucinous_glioblastoma |
Association with transcript: | -98bp_to_ENST00000326840, ENST00000404023, NM_080927, uc003dtd.2, uc003dte.2, uc003dtf.1_5end |
EntrezGene: | DCBLD2 |
HGNC: | 24627 |
UniProt: | Q96PD2E7ET90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.06e-22 | 32 |
smooth muscle cell | 1.49e-15 | 43 |
smooth muscle myoblast | 1.49e-15 | 43 |
muscle precursor cell | 6.74e-13 | 58 |
myoblast | 6.74e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.74e-13 | 58 |
smooth muscle cell of the subclavian artery | 9.11e-13 | 5 |
muscle cell | 4.51e-11 | 55 |
crystallin accumulating cell | 1.42e-10 | 4 |
vertebrate lens cell | 1.42e-10 | 4 |
lens epithelial cell | 1.42e-10 | 4 |
cardiac mesenchymal cell | 1.28e-09 | 4 |
migratory trunk neural crest cell | 1.28e-09 | 4 |
electrically responsive cell | 1.63e-09 | 61 |
electrically active cell | 1.63e-09 | 61 |
ciliated cell | 3.34e-09 | 3 |
ciliated epithelial cell | 3.34e-09 | 3 |
multi-ciliated epithelial cell | 3.34e-09 | 3 |
non-pigmented ciliary epithelial cell | 3.34e-09 | 3 |
aortic smooth muscle cell | 2.94e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.56e-23 | 14 |