FFCP PHASE1:Hg19::chr3:98518582..98518608,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:98518582..98518608,-
|short_description=p@chr3:98518582..98518608,-
|description=CAGE_peak_at_chr3:98518582..98518608,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:98518582..98518608,- | |||
|coexpression_cluster_id=C504 | |||
|description=CAGE_peak_at_chr3:98518582..98518608,- | |||
|id=chr3:98518582..98518608,- | |||
|ontology_enrichment_celltype=CL:0000055!1.44e-18!180;CL:0000220!1.76e-17!246;CL:0002321!5.54e-17!248;CL:0000548!7.93e-13!679;CL:0000004!7.93e-13!679;CL:0000255!7.93e-13!679;CL:0000012!2.28e-12!682;CL:0000144!5.35e-10!625;CL:0000680!2.89e-09!57;CL:0000056!2.89e-09!57;CL:0000355!2.89e-09!57;CL:0000057!3.20e-09!75;CL:0000359!4.04e-09!32;CL:0000192!8.28e-09!42;CL:0000514!8.28e-09!42;CL:0000003!2.28e-08!722;CL:0000222!2.44e-08!119;CL:0000393!2.80e-08!60;CL:0000211!2.80e-08!60;CL:0000187!4.90e-08!54;CL:0000221!5.49e-08!71;CL:0002371!7.57e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.97e-09;3!CL:0000067;4.97e-09;3!CL:0005012;4.97e-09;3!CL:0002304;4.97e-09;3!CL:0002595;7.14e-09;5!CL:0002582;9.16e-08;3!CL:0002586;9.16e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.71e-09,3;CL:0000067,4.71e-09,3;CL:0005012,4.71e-09,3;CL:0002304,4.71e-09,3;CL:0002595,5.84e-09,5;CL:0002582,9.83e-08,3;CL:0002586,1.08e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.17e-09!27;DOID:193!5.47e-09!29;DOID:2394!2.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.15e-14;14!DOID:120;1.29e-13;27!DOID:193;1.88e-12;29!DOID:0060084;2.23e-09;3!DOID:127;2.23e-09;3!DOID:0060072;4.24e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.27e-14,14;DOID:120,9.90e-14,27;DOID:193,1.47e-12,29;DOID:0060084,2.55e-09,3;DOID:127,2.55e-09,3;DOID:0060072,4.68e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.27e-10!143;UBERON:0000486!1.99e-10!82;UBERON:0000914!6.54e-09!83;UBERON:0002329!6.54e-09!83;UBERON:0003077!6.54e-09!83;UBERON:0003059!6.54e-09!83;UBERON:0007282!6.54e-09!83;UBERON:0009618!6.54e-09!83;UBERON:0007285!6.54e-09!83;UBERON:0004290!2.78e-08!70;UBERON:0000475!6.26e-08!365;UBERON:0001134!8.31e-08!61;UBERON:0002036!8.31e-08!61;UBERON:0003082!8.31e-08!61;UBERON:0002385!1.21e-07!63;UBERON:0001015!1.21e-07!63;UBERON:0000383!1.21e-07!63;UBERON:0005156!1.48e-07!59;UBERON:0000990!1.48e-07!59;UBERON:0001637!2.44e-07!42;UBERON:0003509!2.44e-07!42;UBERON:0004572!2.44e-07!42;UBERON:0000490!2.74e-07!138;UBERON:0000483!2.89e-07!309;UBERON:0000119!3.43e-07!312;UBERON:0007625!5.22e-07!11;UBERON:0004573!8.97e-07!33;UBERON:0004571!8.97e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;5.05e-14;11!UBERON:0003513;2.98e-09;7!UBERON:0001778;4.97e-09;3!UBERON:0001775;4.97e-09;3!UBERON:0003834;7.14e-09;5!UBERON:0001533;7.14e-09;5!UBERON:0002118;1.04e-08;5!UBERON:0004573;5.03e-08;33!UBERON:0004571;5.03e-08;33!UBERON:0001781;9.16e-08;3!UBERON:0001782;9.16e-08;3!UBERON:0000019;1.73e-07;19!UBERON:0000047;1.73e-07;19!UBERON:0004088;1.73e-07;19!UBERON:0010230;1.73e-07;19!UBERON:0010371;2.39e-07;31!UBERON:0000970;4.84e-07;20!UBERON:0000488;7.65e-07;4!UBERON:0000992;9.69e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.97e-14,11;UBERON:0003513,2.36e-09,7;UBERON:0001778,4.71e-09,3;UBERON:0001775,4.71e-09,3;UBERON:0003834,5.84e-09,5;UBERON:0001533,5.84e-09,5;UBERON:0002118,1.01e-08,5;UBERON:0004573,1.02e-08,33;UBERON:0004571,1.02e-08,33;UBERON:0005156,1.53e-08,59;UBERON:0000990,1.53e-08,59;UBERON:0003134,9.67e-08,37;UBERON:0000474,9.67e-08,37;UBERON:0001782,1.08e-07,3;UBERON:0005424,1.08e-07,3;UBERON:0003133,2.08e-07,48;UBERON:0000019,4.80e-07,20;UBERON:0000047,4.80e-07,20;UBERON:0010312,4.80e-07,20;UBERON:0004088,4.80e-07,20;UBERON:0010230,4.80e-07,20;UBERON:0003072,4.80e-07,20;UBERON:0004128,4.80e-07,20;UBERON:0003071,4.80e-07,20;UBERON:0000488,7.35e-07,4;UBERON:0000992,8.54e-07,13 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,4.03395087871065,2.41077811209591,0.730310090387373,1.95173119516203,0.123121058076788,0.204000691244253,0,0.286235987131057,1.64249310087461,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,2.17430079477356,3.1042115644759,2.98638271356629,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,1.19168262731897,1.43418310374407,0.709336764396714,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.747243402759005,0.704606991862589,0.161872944368132,0.140450806702248,0.204154171254893,0.61417158655884,0.103325781175765,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0.612975591598039,0,0.226864366320042,0.538168907066586,0.427114777637135,0.423863802319124,0,0.412210116953756,0,0.558350568994769,0.168776332241266,0.194874010322397,1.00973509697646,0.460249493211497,0.161646056818812,0.710019185033229,1.10827308050404,0,0.57978255948989,1.09098448236334,0.573609190778008,0,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0.857839051492628,1.64625428112938,1.1240175325762,0.402115889646523,0.185176890317059,0.325808305310325,0,2.88662684050547,2.20267769452646,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0.93733833986777,1.17587489739202,0.850650583454319,0.53735113621709,0,0.383382679165211,0.492663237895943,0.704387472105808,0,0,0.12624243342638,0.063497894292169,0,0,0,0.616964956219941,0.901029173531752,0,0,0,0.51336800074665,0.775630294546667,0,0.845302752556,0,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,3.61727252471503,0,2.49932477955143,0,0,0,0.958499421966331,1.14861935834114,0,1.01346914667305,0.821905290201534,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,0.415941723061614,0.713715955188647,0.315404830067869,0,0.300946099727719,0,0,1.32845119707087,0,0.60818530127658,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,0,0.804269605718038,0,3.70103265126373,1.24293207719189,1.23190734020714,1.55776328755086,1.27831416305955,0.120859449591622,3.40860999515584,0.552485933615378,0.114814448164607,1.63882051206045,0.131124414959424,0.451199612907412,3.08061348417659,0,0,2.84989398010764,0,0,1.94324324491925,0,0,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,1.28225062558195,1.31205858279882,1.30151357865721,0,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.290012154876366,0.308097234229289,0.460511024178389,0.413509717453592,0,0.580066775656914,0.681813019328807,0,1.32227932288782,0,0.127612712494584,0,1.85938219718914,3.46293581513704,0.6970372701606,0,0,0.869932992075073,0.74129687641568,0.858749320451947,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0.179872457583315,1.09814811894422,0.942499218765491,0.404364963146632,0,0,0,2.19342140668156,2.11300293513511,0.272999822815972,0.282810863907425,0,0.551365343546124,4.64407282668854,1.75380354101505,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0.354761064070598,0.211107635297664,0.987884678879706,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0,0.667852230137435,0,0,0,0,0,0.818149460017238,0,0.622079175323615,0.898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0,0.10893846351899,0,0,0.341826167541004,0,0.179515288819544,0,0,0.183195186803725,0,1.02193298195737,0,0,0,0,0,0,0,4.85295548414462,2.28525931422807,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0.853828638089378,1.38674673013139,0.347119476670262,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0.959293472527256,0.596143835108969,0,0.782205530939212,0.480952921509202,0,0,0,0,0,0.864328787928898,0.248505071130865,0.235694034616795,0.407712618220842,0.523014231561666,0.305994652908965,0.866851769704557,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.157566364614447,0.329663433524666,0,0.590564889088493,0,0,0,0.321506296930038,0.412618309791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| ||
|short_description=p@chr3:98518582..98518608,- | |||
}} | }} |
Latest revision as of 00:07, 30 July 2015
Short description: | p@chr3:98518582..98518608, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98518582..98518608, - |
Coexpression cluster: | C504_leiomyoma_Lens_Ciliary_mesenchymal_Smooth_Mesothelial_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.71e-09 | 3 |
ciliated epithelial cell | 4.71e-09 | 3 |
multi-ciliated epithelial cell | 4.71e-09 | 3 |
non-pigmented ciliary epithelial cell | 4.71e-09 | 3 |
smooth muscle cell of the subclavian artery | 5.84e-09 | 5 |
visceral preadipocyte | 9.83e-08 | 3 |
retinal pigment epithelial cell | 1.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.97e-14 | 11 |
trunk blood vessel | 2.36e-09 | 7 |
ciliary epithelium | 4.71e-09 | 3 |
ciliary body | 4.71e-09 | 3 |
thoracic segment blood vessel | 5.84e-09 | 5 |
subclavian artery | 5.84e-09 | 5 |
right ovary | 1.01e-08 | 5 |
systemic artery | 1.02e-08 | 33 |
systemic arterial system | 1.02e-08 | 33 |
reproductive structure | 1.53e-08 | 59 |
reproductive system | 1.53e-08 | 59 |
female reproductive organ | 9.67e-08 | 37 |
female reproductive system | 9.67e-08 | 37 |
pigmented layer of retina | 1.08e-07 | 3 |
presumptive retinal pigmented epithelium | 1.08e-07 | 3 |
reproductive organ | 2.08e-07 | 48 |
camera-type eye | 4.80e-07 | 20 |
simple eye | 4.80e-07 | 20 |
immature eye | 4.80e-07 | 20 |
ocular region | 4.80e-07 | 20 |
eyeball of camera-type eye | 4.80e-07 | 20 |
optic cup | 4.80e-07 | 20 |
optic vesicle | 4.80e-07 | 20 |
eye primordium | 4.80e-07 | 20 |
atypical epithelium | 7.35e-07 | 4 |
female gonad | 8.54e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.27e-14 | 14 |
female reproductive organ cancer | 9.90e-14 | 27 |
reproductive organ cancer | 1.47e-12 | 29 |
cell type benign neoplasm | 2.55e-09 | 3 |
leiomyoma | 2.55e-09 | 3 |
benign neoplasm | 4.68e-07 | 4 |