FFCP PHASE1:Hg19::chr3:192233054..192233080,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:192233054..192233080,-
|short_description=p@chr3:192233054..192233080,-
|description=CAGE_peak_at_chr3:192233054..192233080,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:192233054..192233080,- | |||
|description=CAGE_peak_at_chr3:192233054..192233080,- | |||
|id=chr3:192233054..192233080,- | |||
|ontology_enrichment_celltype=CL:0000039!1.81e-07!7;CL:0000586!1.81e-07!7;CL:0002322!5.73e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.49e-11;2!CL:0000242;6.49e-11;2!CL:0002149;4.09e-07;6!CL:0002255;4.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.53e-11,2;CL:0002149,4.87e-07,6;CL:0002255,4.87e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.85e-11;4!DOID:1612;1.85e-11;4!DOID:299;4.03e-08;25!DOID:3001;4.09e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.89e-11,4;DOID:1612,1.89e-11,4;DOID:299,4.29e-08,25;DOID:3001,4.87e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.18e-15;20!UBERON:0002619;3.72e-14;22!UBERON:0000956;2.43e-12;25!UBERON:0000203;2.43e-12;25!UBERON:0003296;1.88e-10;4!UBERON:0010133;1.88e-10;4!UBERON:0002081;4.11e-10;2!UBERON:0000007;9.49e-10;2!UBERON:0002780;1.91e-09;41!UBERON:0001890;1.91e-09;41!UBERON:0002791;3.35e-09;32!UBERON:0001869;8.52e-09;32!UBERON:0003528;2.17e-08;34!UBERON:0002020;2.17e-08;34!UBERON:0001893;1.39e-07;34!UBERON:0001870;5.22e-07;3!UBERON:0004151;5.22e-07;3!UBERON:0002114;9.05e-07;2 | |||
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| ||
|short_description=p@chr3:192233054..192233080,- | |||
}} | }} |
Latest revision as of 19:30, 29 July 2015
Short description: | p@chr3:192233054..192233080, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:192233054..192233080, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.53e-11 | 2 |
epithelial cell of uterus | 4.87e-07 | 6 |
stromal cell of endometrium | 4.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.82e-15 | 20 |
regional part of cerebral cortex | 5.51e-14 | 22 |
regional part of forebrain | 1.12e-12 | 41 |
forebrain | 1.12e-12 | 41 |
anterior neural tube | 1.12e-12 | 41 |
future forebrain | 1.12e-12 | 41 |
cerebral cortex | 3.43e-12 | 25 |
pallium | 3.43e-12 | 25 |
brain | 6.47e-11 | 68 |
future brain | 6.47e-11 | 68 |
gland of diencephalon | 1.01e-10 | 4 |
neuroendocrine gland | 1.01e-10 | 4 |
pituitary gland | 3.86e-10 | 2 |
cardiac atrium | 3.86e-10 | 2 |
future cardiac atrium | 3.86e-10 | 2 |
nervous system | 4.07e-10 | 89 |
central nervous system | 4.14e-10 | 81 |
pre-chordal neural plate | 2.41e-09 | 61 |
regional part of nervous system | 2.53e-09 | 53 |
regional part of brain | 2.53e-09 | 53 |
regional part of telencephalon | 2.80e-09 | 32 |
cerebral hemisphere | 2.80e-09 | 32 |
neural tube | 1.04e-08 | 56 |
neural rod | 1.04e-08 | 56 |
future spinal cord | 1.04e-08 | 56 |
neural keel | 1.04e-08 | 56 |
brain grey matter | 1.16e-08 | 34 |
gray matter | 1.16e-08 | 34 |
telencephalon | 1.16e-08 | 34 |
neural plate | 1.83e-07 | 82 |
presumptive neural plate | 1.83e-07 | 82 |
ecto-epithelium | 2.22e-07 | 104 |
frontal cortex | 5.00e-07 | 3 |
cardiac chamber | 5.00e-07 | 3 |
neurectoderm | 5.43e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.89e-11 | 4 |
breast cancer | 1.89e-11 | 4 |
adenocarcinoma | 4.29e-08 | 25 |
female reproductive endometrioid cancer | 4.87e-07 | 6 |