FFCP PHASE1:Hg19::chr3:186524187..186524201,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:186524187..186524201,-
|short_description=p2@RFC4
|description=CAGE_peak_2_at_RFC4_5end
|association_with_transcript=-43bp_to_ENST00000427785_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5984 | |EntrezGene=5984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9972 | |HGNC=9972 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXZ7 | |UniProt=C9JXZ7 | ||
|association_with_transcript=-43bp_to_ENST00000427785_5end | |||
|cluster_id=chr3:186524187..186524201,- | |||
|description=CAGE_peak_2_at_RFC4_5end | |||
|id=chr3:186524187..186524201,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.35e-09,53;CL:0000051,9.35e-09,53;CL:0000988,7.11e-08,177;CL:0000838,8.58e-08,52;CL:0000817,1.76e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.92e-14;29 | |||
|ontology_enrichment_disease=DOID:162!9.19e-50!235;DOID:14566!2.78e-48!239;DOID:0050687!1.78e-25!143;DOID:2531!9.11e-23!51;DOID:0060083!9.11e-23!51;DOID:0050686!1.58e-22!137;DOID:305!1.67e-22!106;DOID:1240!4.35e-16!39;DOID:8692!4.54e-11!31;DOID:0060058!1.42e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.45e-18;51!DOID:0060083;7.45e-18;51!DOID:0060058;4.70e-17;10!DOID:1240;1.18e-16;39!DOID:8692;1.04e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.16e-29,51;DOID:0060083,1.16e-29,51;DOID:162,2.82e-28,235;DOID:14566,2.66e-27,239;DOID:0050686,5.36e-21,137;DOID:1240,4.53e-20,39;DOID:0060058,1.84e-17,10;DOID:305,2.10e-11,106;DOID:8692,1.24e-09,31;DOID:0050687,2.29e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.60e-08!9;UBERON:0008947!9.99e-07!38;UBERON:0003258!9.99e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.73e-21;9!UBERON:0001557;7.73e-21;9!UBERON:0000072;8.35e-09;37!UBERON:0000065;4.15e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.99e-21,9;UBERON:0001557,7.00e-13,19;UBERON:0008947,6.91e-10,38;UBERON:0003258,6.91e-10,38;UBERON:0000072,1.32e-09,47;UBERON:0000065,8.40e-08,54 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0.245733936501509,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0.958120975510189,0.627713197974014,0.382067028739756,1.23150884174919,0.787107813136792,0,0,0,0,0,0.369754010166788,3.95082722959538,1.70603078984906,1.46800219667424,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0.393010762749165,1.23360899399706,0,0,0,0,0.111410456885174,0.589211814949674,0,0,0.512365278902701,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.679856056185397,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.506522046658319,0,0.286836620748814,0,0,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0.389748020644795,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.662648841607426,0.232387885739037,0.207322110030741,1.00928340350251,1.45990943630332,0,0,0,0,0,4.73227200159376,3.03452442140583,3.37415441836875,3.639701100169,3.26819166138609,4.74541238222193,3.37078270400411,3.13954344200554,3.46272441251751,0,0,0,0,0,0,0,6.18048339180511,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.761974731506028,0.381988425558278,0,0,1.02827492703324,0.300343057843917,0,0.112131084345361,0,0.4400297149257,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,2.57795831185113,0,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0.966875596732978,0,0,0.459257792658427,0.364182336013434,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,1.31555925987561,2.3529190592241,0,0,0.325378394664303,0,0.640986253728404,1.32015199872941,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.426133137080504,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.427296284509893,0,0.490080431962063,4.45927620301725,2.74111504655245,1.56512055366511,1.91311527274587,0.399158742865633,1.7235483311913,1.05836791361941,0.973865820823666,1.12318871245384,2.05411211129873,1.56679895773023,0,0.677167111206413,0.481764225311099,1.00899853595524,2.12923118845163,0.343505344755765,0.307240764308458,0.223676107892416,0.834245708559542,1.36771666781428,2.50565556505718,0,0,0.66614393599564,1.4098700508785,0.18714054040822,0,0.970884173996107,2.563197838382,1.42068073403207,0,0.593929361665277,0,0,0,0,2.30725423917463,0.211125408127993,0,0.552567831062295,0.755798243562828,0.306806047506464,1.47701766553283,0,0.808815160325942,0.537063524026827,1.02314474045374,0,0,0,0,0,0,0,0.262379999988587,0,0.455173793141999,1.01701460117107,0,2.06846023944879,0.583209226766509,0.520874984799877,0,0.120596438625408,0,0.221158519862449,0,0,0.435753854075961,0.83654246567162,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,0,0.183195186803725,0,1.02193298195737,0.156980256395025,0.332423363800313,1.35357396370308,1.56850027454192,1.1747511088309,0.948768663620925,0.476809736941136,0.210998064528027,0.163232808159148,0.141353071433941,1.29833183845255,0,0,0,3.26173241548684,4.3247378631276,4.49014382873458,0,0,0,1.64209310294099,0.586993856796269,0.728341138602278,0,0,0,0.252746318513952,5.26131967950724,1.34794648816421,0,0.661983911750998,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.391969589657511,1.13176968554523,0,0.171986032471617,5.708623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| ||
|short_description=p2@RFC4 | |||
}} | }} |
Latest revision as of 05:34, 17 September 2015
Short description: | p2@RFC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000427785_5end |
EntrezGene: | RFC4 |
HGNC: | 9972 |
UniProt: | C9JXZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.35e-09 | 53 |
common lymphoid progenitor | 9.35e-09 | 53 |
hematopoietic cell | 7.11e-08 | 177 |
lymphoid lineage restricted progenitor cell | 8.58e-08 | 52 |
precursor B cell | 1.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.99e-21 | 9 |
upper respiratory tract | 7.00e-13 | 19 |
respiratory primordium | 6.91e-10 | 38 |
endoderm of foregut | 6.91e-10 | 38 |
segment of respiratory tract | 1.32e-09 | 47 |
respiratory tract | 8.40e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.16e-29 | 51 |
immune system cancer | 1.16e-29 | 51 |
cancer | 2.82e-28 | 235 |
disease of cellular proliferation | 2.66e-27 | 239 |
organ system cancer | 5.36e-21 | 137 |
leukemia | 4.53e-20 | 39 |
lymphoma | 1.84e-17 | 10 |
carcinoma | 2.10e-11 | 106 |
myeloid leukemia | 1.24e-09 | 31 |
cell type cancer | 2.29e-08 | 143 |