FFCP PHASE1:Hg19::chr3:17781020..17781044,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:17781020..17781044,-
|short_description=p7@TBC1D5
|description=CAGE_peak_7_at_TBC1D5_5end
|association_with_transcript=-49bp_to_ENST00000443386_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9779 | |EntrezGene=9779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19166 | |HGNC=19166 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3I5 | |UniProt=F2Z3I5 | ||
|association_with_transcript=-49bp_to_ENST00000443386_5end | |||
|cluster_id=chr3:17781020..17781044,- | |||
|description=CAGE_peak_7_at_TBC1D5_5end | |||
|id=chr3:17781020..17781044,- | |||
|ontology_enrichment_celltype=CL:0000945!2.79e-30!24;CL:0000826!2.79e-30!24;CL:0000236!3.66e-14!14;CL:0000542!8.24e-12!53;CL:0000051!8.24e-12!53;CL:0000838!6.84e-11!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.20e-46;24!CL:0000542;2.78e-12;53!CL:0000236;3.32e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.71e-46,24;CL:0000826,1.71e-46,24;CL:0000838,2.27e-20,52;CL:0000542,6.02e-20,53;CL:0000051,6.02e-20,53;CL:0002087,4.05e-11,115;CL:0002031,1.48e-10,120;CL:0000236,2.32e-09,14;CL:0000738,4.98e-09,136;CL:0000988,1.14e-08,177;CL:0002032,1.86e-08,161;CL:0000837,1.86e-08,161;CL:0000037,5.40e-08,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.78e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!7.81e-08!51;DOID:0060083!7.81e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.23e-13;10!DOID:630;9.42e-10;1!DOID:0050177;9.42e-10;1!DOID:0050427;9.42e-10;1!DOID:3371;2.88e-09;1!DOID:4549;2.88e-09;1!DOID:5861;2.88e-09;1!DOID:6496;2.88e-09;1!DOID:2355;2.88e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.74e-13,10;DOID:630,8.68e-10,1;DOID:0050177,8.68e-10,1;DOID:0050427,8.68e-10,1;DOID:3371,1.56e-09,1;DOID:4549,1.56e-09,1;DOID:5861,1.56e-09,1;DOID:6496,1.56e-09,1;DOID:2355,3.83e-09,1;DOID:2531,7.69e-07,51;DOID:0060083,7.69e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.69e-07!3;UBERON:0004854!2.69e-07!3;UBERON:0009034!2.69e-07!3;UBERON:0002095!2.69e-07!3;UBERON:0004782!2.69e-07!3;UBERON:0003281!2.69e-07!3;UBERON:0009664!2.69e-07!3;UBERON:0002296!2.69e-07!3;UBERON:0005602!2.69e-07!3;UBERON:0001179!2.69e-07!3;UBERON:0006293!2.69e-07!3;UBERON:0004177!6.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.59e-11;3!UBERON:0002372;2.88e-09;1!UBERON:0001961;2.88e-09;1!UBERON:0001744;2.88e-09;1!UBERON:0001042;2.88e-09;1!UBERON:0001735;2.88e-09;1!UBERON:0004177;2.94e-07;5!UBERON:0005057;2.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.51e-11,3;UBERON:0004854,1.51e-11,3;UBERON:0009034,1.51e-11,3;UBERON:0002095,1.51e-11,3;UBERON:0004782,1.51e-11,3;UBERON:0003281,1.51e-11,3;UBERON:0009664,1.51e-11,3;UBERON:0002296,1.51e-11,3;UBERON:0005602,1.51e-11,3;UBERON:0001179,1.51e-11,3;UBERON:0006293,1.51e-11,3;UBERON:0002372,5.72e-09,1;UBERON:0001961,5.72e-09,1;UBERON:0001744,5.72e-09,1;UBERON:0001735,5.72e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,2.8735206307481,3.46327437780189,0,0,0,0,0,0,1.54934401160603,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0.889509253863555,0.853460445133014,0.800791974072025,1.14950487990897,0.661044872784862,0,0.569212969109448,2.34894875748376,1.14681968437569,1.32171328579026,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,1.79327847615945,1.30059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0.673588117878509,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0.577465791044295,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.59873811429845,0,0.211673582723883,0,0,1.14117339516596,0,0,0.338583555603207,0,0.201799707191048,0,0,1.53620382154229,0.447352215784832,1.16794399198336,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72318727645497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,1.77912677208373,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85337866052151,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,6.45500771418748,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.766920642832419,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69171052363736,0.193373663920732,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,3.8468219076388 | ||
|short_description=p7@TBC1D5 | |||
}} | }} |
Latest revision as of 20:10, 16 September 2015
Short description: | p7@TBC1D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TBC1D5_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000443386_5end |
EntrezGene: | TBC1D5 |
HGNC: | 19166 |
UniProt: | F2Z3I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.71e-46 | 24 |
pro-B cell | 1.71e-46 | 24 |
lymphoid lineage restricted progenitor cell | 2.27e-20 | 52 |
lymphocyte | 6.02e-20 | 53 |
common lymphoid progenitor | 6.02e-20 | 53 |
nongranular leukocyte | 4.05e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.48e-10 | 120 |
B cell | 2.32e-09 | 14 |
leukocyte | 4.98e-09 | 136 |
hematopoietic cell | 1.14e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.86e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-08 | 161 |
hematopoietic stem cell | 5.40e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.51e-11 | 3 |
gastrointestinal system mesentery | 1.51e-11 | 3 |
stomach region | 1.51e-11 | 3 |
mesentery | 1.51e-11 | 3 |
gastrointestinal system serosa | 1.51e-11 | 3 |
mesentery of stomach | 1.51e-11 | 3 |
gut mesentery | 1.51e-11 | 3 |
dorsal mesentery | 1.51e-11 | 3 |
dorsal mesogastrium | 1.51e-11 | 3 |
peritoneal cavity | 1.51e-11 | 3 |
spleen primordium | 1.51e-11 | 3 |
tonsil | 5.72e-09 | 1 |
mucosa-associated lymphoid tissue | 5.72e-09 | 1 |
lymphoid tissue | 5.72e-09 | 1 |
tonsillar ring | 5.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.74e-13 | 10 |
genetic disease | 8.68e-10 | 1 |
monogenic disease | 8.68e-10 | 1 |
xeroderma pigmentosum | 8.68e-10 | 1 |
chondrosarcoma | 1.56e-09 | 1 |
extraosseous chondrosarcoma | 1.56e-09 | 1 |
myxoid chondrosarcoma | 1.56e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 1.56e-09 | 1 |
anemia | 3.83e-09 | 1 |
hematologic cancer | 7.69e-07 | 51 |
immune system cancer | 7.69e-07 | 51 |