FFCP PHASE1:Hg19::chr3:171529110..171529141,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:171529110..171529141,-
|short_description=p7@PLD1
|description=CAGE_peak_7_at_PLD1_5end
|association_with_transcript=-370bp_to_ENST00000497307_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5337 | |EntrezGene=5337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9067 | |HGNC=9067 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-370bp_to_ENST00000497307_5end | |||
|cluster_id=chr3:171529110..171529141,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_PLD1_5end | |||
|id=chr3:171529110..171529141,- | |||
|ontology_enrichment_celltype=CL:0000860!5.87e-50!45;CL:0002057!4.29e-48!42;CL:0000766!7.48e-37!76;CL:0002194!1.78e-36!63;CL:0000576!1.78e-36!63;CL:0000040!1.78e-36!63;CL:0000559!1.78e-36!63;CL:0002009!4.83e-35!65;CL:0000839!8.14e-32!70;CL:0000557!3.17e-31!71;CL:0000738!1.87e-25!140;CL:0002087!2.20e-24!119;CL:0000763!8.92e-23!112;CL:0000049!8.92e-23!112;CL:0000037!2.53e-19!172;CL:0000566!2.53e-19!172;CL:0002031!4.26e-19!124;CL:0000988!1.55e-17!182;CL:0002032!2.00e-16!165;CL:0000837!2.00e-16!165;CL:0000134!1.30e-12!358;CL:0002320!4.75e-12!365;CL:0000048!4.37e-11!430;CL:0000034!8.42e-11!444;CL:0000723!1.09e-10!436;CL:0000219!1.23e-10!390;CL:0002393!1.16e-08!9;CL:0002397!1.16e-08!9;CL:0000767!9.28e-08!3;CL:0000842!2.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.96e-76;33!CL:0002057;3.96e-76;33!CL:0000473;2.83e-52;39!CL:0000234;2.83e-52;39!CL:0000576;3.42e-45;48!CL:0000766;1.38e-32;69!CL:0002087;8.10e-15;104!CL:0000763;1.24e-14;100!CL:0002393;9.10e-12;6!CL:0002397;9.10e-12;6!CL:0000738;4.28e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.25e-85,42;CL:0002057,4.25e-85,42;CL:0000473,5.03e-74,48;CL:0000234,5.03e-74,48;CL:0002194,1.63e-58,59;CL:0000576,1.63e-58,59;CL:0000040,1.63e-58,59;CL:0000559,1.63e-58,59;CL:0000766,6.29e-57,72;CL:0002009,1.64e-56,61;CL:0000839,5.00e-52,66;CL:0000557,3.29e-51,67;CL:0000763,6.82e-37,108;CL:0000049,6.82e-37,108;CL:0000738,1.43e-28,136;CL:0002087,1.66e-28,115;CL:0002031,3.57e-27,120;CL:0002032,1.45e-23,161;CL:0000837,1.45e-23,161;CL:0000037,1.99e-22,168;CL:0000988,4.28e-21,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0002393,4.66e-08,9;CL:0002397,4.66e-08,9;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.01e-60;42!CL:0000049;1.21e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.18e-30!80;UBERON:0001474!2.92e-27!86;UBERON:0002390!9.77e-26!102;UBERON:0003061!9.77e-26!102;UBERON:0002193!7.48e-24!112;UBERON:0002405!1.20e-22!115;UBERON:0004765!1.21e-21!101;UBERON:0001434!1.21e-21!101;UBERON:0002204!5.11e-13!167;UBERON:0002384!2.75e-11!375;UBERON:0003081!5.06e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.38e-45,76;UBERON:0001474,2.66e-41,82;UBERON:0004765,2.38e-37,90;UBERON:0002405,4.84e-36,93;UBERON:0002390,4.90e-34,98;UBERON:0003061,4.90e-34,98;UBERON:0001434,2.74e-33,100;UBERON:0002193,1.42e-30,108;UBERON:0002204,1.62e-18,167;UBERON:0003081,1.43e-14,203;UBERON:0002384,5.43e-10,371;UBERON:0000926,5.22e-08,315;UBERON:0004120,5.22e-08,315;UBERON:0006603,5.22e-08,315 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,0.309632246632152,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.30206522429511,0,0,0,0,0,0.242584061187816,0.929716147622738,3.28934310417461,2.47765096716083,0.575384784644301,6.40401766322752,1.6553756092201,5.17118521104928,32.9197188627751,2.70852973188684,0.188242339542605,1.63743690034707,0,9.79468455586888,29.2045414639245,11.5080682643827,0,0.199463657621632,0,3.77272010217159,9.64554881974938,2.4912889959823,0,5.73631210262222,0.868755378820466,1.21079900526674,15.4676607114777,4.1140110367315,0.211255286311942,0.212604299965044,0,1.01095768031846,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,1.22538230705385,3.27872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0.295710299979268,0,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.782982875895635,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0.532214220975833,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@PLD1 | |||
}} | }} |
Latest revision as of 17:38, 16 September 2015
Short description: | p7@PLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PLD1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -370bp_to_ENST00000497307_5end |
EntrezGene: | PLD1 |
HGNC: | 9067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.25e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.25e-85 | 42 |
defensive cell | 5.03e-74 | 48 |
phagocyte | 5.03e-74 | 48 |
monopoietic cell | 1.63e-58 | 59 |
monocyte | 1.63e-58 | 59 |
monoblast | 1.63e-58 | 59 |
promonocyte | 1.63e-58 | 59 |
myeloid leukocyte | 6.29e-57 | 72 |
macrophage dendritic cell progenitor | 1.64e-56 | 61 |
myeloid lineage restricted progenitor cell | 5.00e-52 | 66 |
granulocyte monocyte progenitor cell | 3.29e-51 | 67 |
myeloid cell | 6.82e-37 | 108 |
common myeloid progenitor | 6.82e-37 | 108 |
leukocyte | 1.43e-28 | 136 |
nongranular leukocyte | 1.66e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.57e-27 | 120 |
hematopoietic oligopotent progenitor cell | 1.45e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-23 | 161 |
hematopoietic stem cell | 1.99e-22 | 168 |
hematopoietic cell | 4.28e-21 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
intermediate monocyte | 4.66e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.66e-08 | 9 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.38e-45 | 76 |
bone element | 2.66e-41 | 82 |
skeletal element | 2.38e-37 | 90 |
immune system | 4.84e-36 | 93 |
hematopoietic system | 4.90e-34 | 98 |
blood island | 4.90e-34 | 98 |
skeletal system | 2.74e-33 | 100 |
hemolymphoid system | 1.42e-30 | 108 |
musculoskeletal system | 1.62e-18 | 167 |
lateral plate mesoderm | 1.43e-14 | 203 |
connective tissue | 5.43e-10 | 371 |
mesoderm | 5.22e-08 | 315 |
mesoderm-derived structure | 5.22e-08 | 315 |
presumptive mesoderm | 5.22e-08 | 315 |