FFCP PHASE1:Hg19::chr3:168865194..168865245,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:168865194..168865245,-
|short_description=p3@MECOM
|description=CAGE_peak_3_at_MECOM_5end
|association_with_transcript=276bp_to_ENST00000464456,NM_00116400...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2122 | |EntrezGene=2122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |HGNC=3498 | ||
|TSSclassifier=strong | |||
|UniProt=Q03112 | |UniProt=Q03112 | ||
|association_with_transcript=276bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end | |||
|cluster_id=chr3:168865194..168865245,- | |||
|description=CAGE_peak_3_at_MECOM_5end | |||
|id=chr3:168865194..168865245,- | |||
|ontology_enrichment_celltype=CL:0002139!6.91e-12!24;CL:0000071!1.69e-10!18;CL:0002546!1.69e-10!18;CL:0000222!6.60e-10!119;CL:0000115!5.26e-09!35;CL:0000220!8.83e-09!246;CL:0000359!1.30e-08!32;CL:0002321!1.60e-08!248;CL:0002078!3.01e-07!44;CL:0000192!8.45e-07!42;CL:0000514!8.45e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000071;5.39e-13;18!CL:0002139;7.65e-13;24!CL:0000115;3.73e-09;36!CL:0000359;3.77e-07;32!CL:0002543;6.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,5.76e-13,18;CL:0002546,5.76e-13,18;CL:0002139,7.92e-13,24;CL:0000115,4.90e-11,36;CL:0000222,8.85e-09,121;CL:0002078,1.35e-08,45;CL:0002321,2.14e-07,250;CL:0000359,2.73e-07,32;CL:0002543,5.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.39e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.68e-29!241;UBERON:0000477!8.11e-29!286;UBERON:0004872!1.12e-23!84;UBERON:0003914!5.68e-23!118;UBERON:0001981!2.66e-21!60;UBERON:0007500!2.66e-21!60;UBERON:0004537!2.66e-21!60;UBERON:0006965!2.66e-21!60;UBERON:0000025!2.92e-21!194;UBERON:0002049!3.80e-21!79;UBERON:0007798!3.80e-21!79;UBERON:0000055!1.47e-20!69;UBERON:0001009!4.78e-19!113;UBERON:0000483!8.33e-19!309;UBERON:0000119!3.85e-18!312;UBERON:0004535!5.80e-18!110;UBERON:0000481!1.53e-17!347;UBERON:0001637!2.39e-15!42;UBERON:0003509!2.39e-15!42;UBERON:0004572!2.39e-15!42;UBERON:0000475!2.94e-14!365;UBERON:0000468!1.27e-13!659;UBERON:0003103!3.59e-13!69;UBERON:0000467!1.31e-12!625;UBERON:0000480!2.11e-12!626;UBERON:0004573!9.90e-12!33;UBERON:0004571!9.90e-12!33;UBERON:0000490!1.21e-10!138;UBERON:0007023!1.23e-10!115;UBERON:0003104!1.28e-10!238;UBERON:0009142!1.28e-10!238;UBERON:0001986!1.69e-10!18;UBERON:0004638!1.69e-10!18;UBERON:0004852!1.69e-10!18;UBERON:0007100!3.13e-09!27;UBERON:0000947!5.35e-09!21;UBERON:0010191!5.35e-09!21;UBERON:0002050!9.21e-09!605;UBERON:0005423!9.21e-09!605;UBERON:0000922!9.39e-09!612;UBERON:0000487!1.26e-08!22;UBERON:0000923!1.67e-08!604;UBERON:0005291!1.67e-08!604;UBERON:0006598!1.67e-08!604;UBERON:0002532!1.67e-08!604;UBERON:0000948!3.99e-08!24;UBERON:0005498!3.99e-08!24;UBERON:0004140!3.99e-08!24;UBERON:0009881!3.99e-08!24;UBERON:0004141!3.99e-08!24;UBERON:0003084!3.99e-08!24;UBERON:0007005!3.99e-08!24;UBERON:0004139!3.99e-08!24;UBERON:0004291!3.99e-08!24;UBERON:0002100!1.04e-07!216;UBERON:0005256!1.40e-07!143;UBERON:0006914!3.82e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.39e-13;18!UBERON:0001986;5.39e-13;18!UBERON:0004852;5.39e-13;18!UBERON:0001637;1.49e-12;42!UBERON:0003509;1.49e-12;42!UBERON:0004572;1.49e-12;42!UBERON:0007500;6.53e-12;56!UBERON:0001981;6.53e-12;56!UBERON:0004537;6.53e-12;56!UBERON:0004573;1.46e-10;33!UBERON:0004571;1.46e-10;33!UBERON:0000487;1.53e-10;22!UBERON:0000055;4.26e-10;65!UBERON:0002049;1.08e-09;75!UBERON:0007798;1.08e-09;75!UBERON:0007100;5.86e-09;25!UBERON:0000947;1.54e-08;21!UBERON:0010191;1.54e-08;21!UBERON:0006914;1.63e-08;25!UBERON:0003914;4.17e-08;74!UBERON:0000948;1.40e-07;22!UBERON:0000025;3.98e-07;93!UBERON:0001009;7.16e-07;112!UBERON:0004111;8.93e-07;130 | |||
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| ||
|short_description=p3@MECOM | |||
}} | }} |
Latest revision as of 14:24, 16 September 2015
Short description: | p3@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MECOM_5end |
Coexpression cluster: | NA |
Association with transcript: | 276bp_to_ENST00000464456, NM_001164000, uc003ffk.2_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 5.76e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.76e-13 | 18 |
endothelial cell of vascular tree | 7.92e-13 | 24 |
endothelial cell | 4.90e-11 | 36 |
mesodermal cell | 8.85e-09 | 121 |
meso-epithelial cell | 1.35e-08 | 45 |
embryonic cell | 2.14e-07 | 250 |
vascular associated smooth muscle cell | 2.73e-07 | 32 |
vein endothelial cell | 5.34e-07 | 6 |