FFCP PHASE1:Hg19::chr3:150920988..150921009,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:150920988..150921009,-
|short_description=p1@GPR171
|description=CAGE_peak_1_at_GPR171_5end
|association_with_transcript=0bp_to_ENST00000480322,NM_013308,u...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29909 | |EntrezGene=29909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30057 | |HGNC=30057 | ||
|TSSclassifier=strong | |||
|UniProt=C9JR91,O14626 | |UniProt=C9JR91,O14626 | ||
|association_with_transcript=0bp_to_ENST00000480322,NM_013308,uc003eyq.3_5end | |||
|cluster_id=chr3:150920988..150921009,- | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_1_at_GPR171_5end | |||
|id=chr3:150920988..150921009,- | |||
|ontology_enrichment_celltype=CL:0000738!3.05e-27!140;CL:0000037!1.01e-21!172;CL:0000566!1.01e-21!172;CL:0002087!1.15e-20!119;CL:0000084!2.33e-20!25;CL:0000827!2.33e-20!25;CL:0000988!3.31e-20!182;CL:0000791!4.00e-20!18;CL:0000789!4.00e-20!18;CL:0002420!4.00e-20!18;CL:0002419!4.00e-20!18;CL:0000790!4.00e-20!18;CL:0002031!1.82e-19!124;CL:0002032!4.43e-18!165;CL:0000837!4.43e-18!165;CL:0000625!1.91e-13!11;CL:0000542!7.52e-13!53;CL:0000051!7.52e-13!53;CL:0000838!1.72e-12!52;CL:0000451!1.95e-09!10;CL:0000766!1.66e-08!76;CL:0002057!1.87e-08!42;CL:0000990!2.16e-08!8;CL:0002009!3.36e-08!65;CL:0000557!7.35e-08!71;CL:0000860!2.04e-07!45;CL:0000763!2.61e-07!112;CL:0000049!2.61e-07!112;CL:0000624!2.86e-07!6;CL:0002194!3.38e-07!63;CL:0000576!3.38e-07!63;CL:0000040!3.38e-07!63;CL:0000559!3.38e-07!63;CL:0000839!3.43e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.99e-30;18!CL:0000789;1.99e-30;18!CL:0002419;1.99e-30;18!CL:0000084;1.21e-25;25!CL:0000625;5.45e-20;11!CL:0000624;1.82e-10;6!CL:0000453;9.05e-09;5!CL:0000990;3.11e-08;8!CL:0002087;5.24e-07;104!CL:0000542;5.50e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.04e-30,18;CL:0000789,2.04e-30,18;CL:0002420,2.04e-30,18;CL:0002419,2.04e-30,18;CL:0000790,2.04e-30,18;CL:0000084,1.23e-25,25;CL:0000827,1.23e-25,25;CL:0000738,5.00e-20,136;CL:0000625,5.14e-20,11;CL:0000037,7.78e-16,168;CL:0002087,2.49e-15,115;CL:0000988,2.91e-14,177;CL:0002031,3.06e-13,120;CL:0002032,4.10e-13,161;CL:0000837,4.10e-13,161;CL:0000838,1.42e-12,52;CL:0000542,3.30e-12,53;CL:0000051,3.30e-12,53;CL:0000624,1.97e-10,6;CL:0000453,8.77e-09,5;CL:0000990,3.43e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.99e-30;18!CL:0000051;5.50e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.92e-29!115;UBERON:0002390!1.81e-17!102;UBERON:0003061!1.81e-17!102;UBERON:0002193!4.45e-16!112;UBERON:0000178!1.03e-12!15;UBERON:0000179!1.03e-12!15;UBERON:0000463!1.03e-12!15;UBERON:0004177!1.46e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-15;15!UBERON:0000179;1.85e-15;15!UBERON:0000463;1.85e-15;15!UBERON:0002390;6.90e-11;32!UBERON:0002193;2.74e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.86e-15,15;UBERON:0000179,1.86e-15,15;UBERON:0000463,1.86e-15,15;UBERON:0002390,8.15e-14,98;UBERON:0003061,8.15e-14,98;UBERON:0002193,2.00e-13,108;UBERON:0007023,6.51e-10,114;UBERON:0004177,5.88e-09,7;UBERON:0005057,5.88e-09,7;UBERON:0002370,7.59e-08,4;UBERON:0005058,7.59e-08,4;UBERON:0009113,7.59e-08,4;UBERON:0003295,7.59e-08,4;UBERON:0005562,7.59e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.393553906568396,1.96682138424452,3.45446458287491,0.464448369948228,0,0,0,0,0,1.17440175733939,2.76997704265939,1.00272223735071,1.30206522429511,1.34349284543955,15.546895968911,4.37878464978117,0.726991193897824,0,0.727752183563449,0.232429036905685,0.822335776043652,0,0.863077176966451,0.512321413058201,0.47296445977717,1.72372840368309,1.93645405075148,0,0.564727018627814,0.818718450173537,0.449446968890169,1.22433556948361,1.60464513538047,0.639337125799041,0.329851300186716,0,0,2.61188314765726,1.13477044938228,0.622822248995575,1.50749199154046,0.521482918420201,0,1.21079900526674,2.94622108790052,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,1.31692042387539,13.5729741378545,8.64623678048162,8.63526295797939,61.5246303037695,7.17028986593899,10.4158517261641,5.84480185223734,171.906334973823,27.3983493951599,31.2362791362906,30.8716404692118,67.1198515362538,61.1278933531428,110.995585607481,109.15825702541,128.382766980628,27.4330141849812,19.2629396224593,19.8617495229456,170.643870102535,29.124757513746,38.1426464485719,64.2670017729537,80.2784844096724,76.8278475550574,81.7388758225602,54.5081931061537,70.0086763014669,101.1938885074,91.8695737930785,75.5437757167363,14.9188989986302,12.3022490060413,8.97911304073354,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,1.29818957461873,2.08955684759121,0.398873881556595,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6762642704595,8.6693534488848,5.60631694634745,6.93052395910641,0,0,0,0,0,0,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2669938024792,10.3542816392936,5.65656056358255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.91845782408015,0,0,0,0,31.4617517723945,21.4098417999865,17.0894156152249,29.7789719322236,34.9657932123265,27.8843523812868,35.6420748577156,18.2418790547682,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.59873811429845,3.83010740264733,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0.334330152832435,0,0,0,0,0,0,0,0,0.211125408127993,2.19172787076177,9.94622095912132,0,0,0.369254416383208,0,0,0,0,5.12945709312055,14.3689855408164,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,1.92375646259493,0,0,0,0,0,0.183195186803725,0.533034776018635,0,44.7393730725821,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.95362361218699,6.72133159426988,0,0.123563938946503,0.208843899010911,0.269604531922708,0,0,0,0,0,0.394584402849391,9.67925728389311,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,2.03676934625681,0,0.451961481561065,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,24.1856365936969,0.558564802544508,0.687481272035051,0.717873024576814,0.199679000498991,0,0.89268582976749,0.335917362433631,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,11.0237206860235,3.86900977278975,0.0607495566580247,0,2.91581117007033,0.209818352539992,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0.52893040697076,0,0,10.2515916064987,3.45849471219265,8.28478110694391,25.3044671124095,0,0.121792598380896,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,1.72022758707021,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,18.2024831229307,18.4828895509104,0,0,0,62.3960675067381,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,1.98916222116275,1.42899623863589,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,1.09651553371436,4.46590060550365,0,0,0,0.336283722218824,0,0.455324382702595,0.266107110487916,0.576169937778896,0,0.135939465953663,0.0657727735628491,0,0,1.72684804271131,0,0,1.82631744101899,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.718639647993729,0,0.971421986118279,0,0,0,0.22589216407792,0,0,14.4315675661857,2.84127428655144,0,0.735444965261716,0,0.588925401344836,2.37637120261669,0,0,14.8494590408169,4.5120521581504,0.0999411559249289,0,0,0,0.730336388246517,2.2936464170227,0.430018749454354,0,0,0,8.99345628876181,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0.310298987585686,2.55880778281177,0.23806443146374,11.1092924917931,17.5671441457278,0,1.01835453245064,0.202117188958219,0.653150243690884,0,3.83906702183149,5.1639987882727,0.665320713092027,0,0,0,0,0,1.22241444182866,0,0,7.84967795005002,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.393553906568396,1.96682138424452,3.45446458287491,0.464448369948228,0,0,0,0,0,1.17440175733939,2.76997704265939,1.00272223735071,1.30206522429511,1.34349284543955,15.546895968911,4.37878464978117,0.726991193897824,0,0.727752183563449,0.232429036905685,0.822335776043652,0,0.863077176966451,0.512321413058201,0.47296445977717,1.72372840368309,1.93645405075148,0,0.564727018627814,0.818718450173537,0.449446968890169,1.22433556948361,1.60464513538047,0.639337125799041,0.329851300186716,0,0,2.61188314765726,1.13477044938228,0.622822248995575,1.50749199154046,0.521482918420201,0,1.21079900526674,2.94622108790052,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,1.31692042387539,13.5729741378545,8.64623678048162,8.63526295797939,61.5246303037695,7.17028986593899,10.4158517261641,5.84480185223734,171.906334973823,27.3983493951599,31.2362791362906,30.8716404692118,67.1198515362538,61.1278933531428,110.995585607481,109.15825702541,128.382766980628,27.4330141849812,19.2629396224593,19.8617495229456,170.643870102535,29.124757513746,38.1426464485719,64.2670017729537,80.2784844096724,76.8278475550574,81.7388758225602,54.5081931061537,70.0086763014669,101.1938885074,91.8695737930785,75.5437757167363,14.9188989986302,12.3022490060413,8.97911304073354,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,1.29818957461873,2.08955684759121,0.398873881556595,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6762642704595,8.6693534488848,5.60631694634745,6.93052395910641,0,0,0,0,0,0,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2669938024792,10.3542816392936,5.65656056358255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.91845782408015,0,0,0,0,31.4617517723945,21.4098417999865,17.0894156152249,29.7789719322236,34.9657932123265,27.8843523812868,35.6420748577156,18.2418790547682,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.59873811429845,3.83010740264733,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0.334330152832435,0,0,0,0,0,0,0,0,0.211125408127993,2.19172787076177,9.94622095912132,0,0,0.369254416383208,0,0,0,0,5.12945709312055,14.3689855408164,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,1.92375646259493,0,0,0,0,0,0.183195186803725,0.533034776018635,0,44.7393730725821,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.95362361218699,6.72133159426988,0,0.123563938946503,0.208843899010911,0.269604531922708,0,0,0,0,0,0.394584402849391,9.67925728389311,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,2.03676934625681,0,0.451961481561065,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,24.1856365936969,0.558564802544508,0.687481272035051,0.717873024576814,0.199679000498991,0,0.89268582976749,0.335917362433631,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,11.0237206860235,3.86900977278975,0.0607495566580247,0,2.91581117007033,0.209818352539992,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0.52893040697076,0,0,10.2515916064987,3.45849471219265,8.28478110694391,25.3044671124095,0,0.121792598380896,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,1.72022758707021,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,18.2024831229307,18.4828895509104,0,0,0,62.3960675067381,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,1.98916222116275,1.42899623863589,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,1.09651553371436,4.46590060550365,0,0,0,0.336283722218824,0,0.455324382702595,0.266107110487916,0.576169937778896,0,0.135939465953663,0.0657727735628491,0,0,1.72684804271131,0,0,1.82631744101899,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.718639647993729,0,0.971421986118279,0,0,0,0.22589216407792,0,0,14.4315675661857,2.84127428655144,0,0.735444965261716,0,0.588925401344836,2.37637120261669,0,0,14.8494590408169,4.5120521581504,0.0999411559249289,0,0,0,0.730336388246517,2.2936464170227,0.430018749454354,0,0,0,8.99345628876181,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0.310298987585686,2.55880778281177,0.23806443146374,11.1092924917931,17.5671441457278,0,1.01835453245064,0.202117188958219,0.653150243690884,0,3.83906702183149,5.1639987882727,0.665320713092027,0,0,0,0,0,1.22241444182866,0,0,7.84967795005002,0 | ||
|short_description=p1@GPR171 | |||
}} | }} |
Latest revision as of 00:38, 16 September 2015
Short description: | p1@GPR171 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR171_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 0bp_to_ENST00000480322, NM_013308, uc003eyq.3_5end |
EntrezGene: | GPR171 |
HGNC: | 30057 |
UniProt: | C9JR91O14626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.04e-30 | 18 |
alpha-beta T cell | 2.04e-30 | 18 |
immature T cell | 2.04e-30 | 18 |
mature T cell | 2.04e-30 | 18 |
immature alpha-beta T cell | 2.04e-30 | 18 |
T cell | 1.23e-25 | 25 |
pro-T cell | 1.23e-25 | 25 |
leukocyte | 5.00e-20 | 136 |
CD8-positive, alpha-beta T cell | 5.14e-20 | 11 |
hematopoietic stem cell | 7.78e-16 | 168 |
nongranular leukocyte | 2.49e-15 | 115 |
hematopoietic cell | 2.91e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 3.06e-13 | 120 |
hematopoietic oligopotent progenitor cell | 4.10e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-13 | 161 |
lymphoid lineage restricted progenitor cell | 1.42e-12 | 52 |
lymphocyte | 3.30e-12 | 53 |
common lymphoid progenitor | 3.30e-12 | 53 |
CD4-positive, alpha-beta T cell | 1.97e-10 | 6 |
Langerhans cell | 8.77e-09 | 5 |
conventional dendritic cell | 3.43e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.86e-15 | 15 |
haemolymphatic fluid | 1.86e-15 | 15 |
organism substance | 1.86e-15 | 15 |
hematopoietic system | 8.15e-14 | 98 |
blood island | 8.15e-14 | 98 |
hemolymphoid system | 2.00e-13 | 108 |
adult organism | 6.51e-10 | 114 |
hemopoietic organ | 5.88e-09 | 7 |
immune organ | 5.88e-09 | 7 |
thymus | 7.59e-08 | 4 |
hemolymphoid system gland | 7.59e-08 | 4 |
thymic region | 7.59e-08 | 4 |
pharyngeal gland | 7.59e-08 | 4 |
thymus primordium | 7.59e-08 | 4 |