FFCP PHASE1:Hg19::chr3:149375747..149375758,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:149375747..149375758,-
|short_description=p3@WWTR1
|description=CAGE_peak_3_at_WWTR1_5end
|association_with_transcript=23bp_to_uc003exf.2_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_uc003exf.2_5end | |||
|cluster_id=chr3:149375747..149375758,- | |||
|description=CAGE_peak_3_at_WWTR1_5end | |||
|id=chr3:149375747..149375758,- | |||
|ontology_enrichment_celltype=CL:0000055!5.88e-29!180;CL:0000222!4.25e-21!119;CL:0000220!3.71e-15!246;CL:0002321!9.90e-15!248;CL:0002139!1.66e-14!24;CL:0000115!1.02e-13!35;CL:0000680!9.26e-13!57;CL:0000056!9.26e-13!57;CL:0000355!9.26e-13!57;CL:0000183!1.37e-12!59;CL:0000359!1.50e-12!32;CL:0000071!3.42e-12!18;CL:0002546!3.42e-12!18;CL:0000187!4.91e-12!54;CL:0000393!5.93e-12!60;CL:0000211!5.93e-12!60;CL:0000192!3.63e-11!42;CL:0000514!3.63e-11!42;CL:0002078!4.61e-11!44;CL:0000057!5.32e-10!75;CL:0000213!1.21e-09!57;CL:0000215!1.21e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.26e-16;24!CL:0000115;1.03e-13;36!CL:0000071;1.31e-13;18!CL:0000359;1.77e-12;32!CL:0000192;8.03e-09;43!CL:0002078;2.85e-08;45!CL:1000413;2.27e-07;9!CL:0000213;3.84e-07;58!CL:0000215;3.84e-07;58!CL:0002539;4.67e-07;10!CL:0002494;9.89e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.92e-21,121;CL:0000115,1.92e-16,36;CL:0002139,3.73e-16,24;CL:0000071,1.52e-13,18;CL:0002546,1.52e-13,18;CL:0000359,4.15e-13,32;CL:0002078,6.95e-13,45;CL:0000680,2.48e-12,58;CL:0000056,2.48e-12,58;CL:0000355,2.48e-12,58;CL:0002321,5.38e-12,250;CL:0000187,1.56e-11,55;CL:0000393,3.44e-11,61;CL:0000211,3.44e-11,61;CL:0000192,4.84e-11,43;CL:0000514,4.84e-11,43;CL:0000213,7.75e-10,58;CL:0000215,7.75e-10,58;CL:0000057,2.52e-09,76;CL:1000413,2.43e-07,9;CL:0002539,4.45e-07,10;CL:0002494,5.96e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;1.31e-13;18!CL:0000514;8.03e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.77e-29!79;UBERON:0007798!4.77e-29!79;UBERON:0004872!1.07e-28!84;UBERON:0001981!8.30e-27!60;UBERON:0007500!8.30e-27!60;UBERON:0004537!8.30e-27!60;UBERON:0006965!8.30e-27!60;UBERON:0000055!8.83e-27!69;UBERON:0003914!1.56e-25!118;UBERON:0000477!1.47e-23!286;UBERON:0004111!7.04e-23!241;UBERON:0000119!1.27e-22!312;UBERON:0000483!3.05e-22!309;UBERON:0001637!1.87e-21!42;UBERON:0003509!1.87e-21!42;UBERON:0004572!1.87e-21!42;UBERON:0000025!3.24e-21!194;UBERON:0004535!1.01e-20!110;UBERON:0001009!3.63e-20!113;UBERON:0004573!2.58e-17!33;UBERON:0004571!2.58e-17!33;UBERON:0000475!5.35e-16!365;UBERON:0000467!1.22e-15!625;UBERON:0000480!2.41e-15!626;UBERON:0000468!2.57e-15!659;UBERON:0000490!3.24e-15!138;UBERON:0000481!4.01e-15!347;UBERON:0002385!9.62e-13!63;UBERON:0001015!9.62e-13!63;UBERON:0000383!9.62e-13!63;UBERON:0002100!1.30e-12!216;UBERON:0000922!2.35e-12!612;UBERON:0001134!2.96e-12!61;UBERON:0002036!2.96e-12!61;UBERON:0003082!2.96e-12!61;UBERON:0001986!3.42e-12!18;UBERON:0004638!3.42e-12!18;UBERON:0004852!3.42e-12!18;UBERON:0002050!3.84e-12!605;UBERON:0005423!3.84e-12!605;UBERON:0000923!5.06e-12!604;UBERON:0005291!5.06e-12!604;UBERON:0006598!5.06e-12!604;UBERON:0002532!5.06e-12!604;UBERON:0004290!5.31e-12!70;UBERON:0000487!1.13e-11!22;UBERON:0005256!1.37e-11!143;UBERON:0000914!1.73e-11!83;UBERON:0002329!1.73e-11!83;UBERON:0003077!1.73e-11!83;UBERON:0003059!1.73e-11!83;UBERON:0007282!1.73e-11!83;UBERON:0009618!1.73e-11!83;UBERON:0007285!1.73e-11!83;UBERON:0000947!2.24e-11!21;UBERON:0010191!2.24e-11!21;UBERON:0006914!2.66e-10!25;UBERON:0000486!4.87e-10!82;UBERON:0003104!1.75e-09!238;UBERON:0009142!1.75e-09!238;UBERON:0000948!5.89e-08!24;UBERON:0005498!5.89e-08!24;UBERON:0004140!5.89e-08!24;UBERON:0009881!5.89e-08!24;UBERON:0004141!5.89e-08!24;UBERON:0003084!5.89e-08!24;UBERON:0007005!5.89e-08!24;UBERON:0004139!5.89e-08!24;UBERON:0004291!5.89e-08!24;UBERON:0003103!3.64e-07!69;UBERON:0007100!3.88e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.13e-17;33!UBERON:0004571;1.13e-17;33!UBERON:0001637;1.99e-17;42!UBERON:0003509;1.99e-17;42!UBERON:0004572;1.99e-17;42!UBERON:0007500;2.07e-15;56!UBERON:0001981;2.07e-15;56!UBERON:0004537;2.07e-15;56!UBERON:0000055;7.43e-14;65!UBERON:0004638;1.31e-13;18!UBERON:0001986;1.31e-13;18!UBERON:0004852;1.31e-13;18!UBERON:0000487;7.13e-13;22!UBERON:0003914;7.76e-13;74!UBERON:0002049;1.10e-12;75!UBERON:0007798;1.10e-12;75!UBERON:0000947;1.60e-12;21!UBERON:0010191;1.60e-12;21!UBERON:0006914;9.95e-11;25!UBERON:0000025;3.20e-08;93!UBERON:0004535;4.52e-08;109!UBERON:0000490;1.73e-07;33!UBERON:0003915;2.27e-07;9!UBERON:0004700;2.27e-07;9!UBERON:0001917;2.27e-07;9!UBERON:0000948;2.66e-07;22!UBERON:0004237;4.67e-07;10!UBERON:0004695;4.67e-07;10!UBERON:0002111;4.67e-07;10!UBERON:0004178;4.67e-07;10!UBERON:0001009;5.23e-07;112 | |||
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| ||
|short_description=p3@WWTR1 | |||
}} | }} |
Latest revision as of 22:12, 15 September 2015
Short description: | p3@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_uc003exf.2_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.92e-21 | 121 |
endothelial cell | 1.92e-16 | 36 |
endothelial cell of vascular tree | 3.73e-16 | 24 |
blood vessel endothelial cell | 1.52e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.52e-13 | 18 |
vascular associated smooth muscle cell | 4.15e-13 | 32 |
meso-epithelial cell | 6.95e-13 | 45 |
muscle precursor cell | 2.48e-12 | 58 |
myoblast | 2.48e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.48e-12 | 58 |
embryonic cell | 5.38e-12 | 250 |
muscle cell | 1.56e-11 | 55 |
electrically responsive cell | 3.44e-11 | 61 |
electrically active cell | 3.44e-11 | 61 |
smooth muscle cell | 4.84e-11 | 43 |
smooth muscle myoblast | 4.84e-11 | 43 |
lining cell | 7.75e-10 | 58 |
barrier cell | 7.75e-10 | 58 |
fibroblast | 2.52e-09 | 76 |
endothelial cell of artery | 2.43e-07 | 9 |
aortic smooth muscle cell | 4.45e-07 | 10 |
cardiocyte | 5.96e-07 | 16 |