FFCP PHASE1:Hg19::chr3:145881495..145881517,-: Difference between revisions
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|id=chr3:145881495..145881517,-
|short_description=p11@PLOD2
|description=CAGE_peak_11_at_PLOD2_5end
|association_with_transcript=-55bp_to_ENST00000469350_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5352 | |EntrezGene=5352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9082 | |HGNC=9082 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXZ0 | |UniProt=C9JXZ0 | ||
|association_with_transcript=-55bp_to_ENST00000469350_5end | |||
|cluster_id=chr3:145881495..145881517,- | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_11_at_PLOD2_5end | |||
|id=chr3:145881495..145881517,- | |||
|ontology_enrichment_celltype=CL:0000077!6.20e-19!19;CL:0000222!6.76e-10!119;CL:0000076!1.74e-08!62;CL:0000220!3.45e-07!246;CL:0002321!5.13e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.99e-26;19!CL:0002097;3.32e-14;2!CL:0000174;9.10e-10;3!CL:0002166;1.11e-09;3!CL:0000319;3.10e-08;1!CL:0000511;1.31e-07;1!CL:0002625;1.31e-07;1!CL:0000216;1.31e-07;1!CL:0000150;5.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.96e-26,19;CL:0002097,2.63e-14,2;CL:0000174,7.81e-10,3;CL:0002166,8.52e-10,3;CL:0000076,1.54e-08,63;CL:0000319,3.10e-08,1;CL:0000066,3.89e-08,253;CL:0000213,1.21e-07,58;CL:0000215,1.21e-07,58;CL:0000511,1.26e-07,1;CL:0002625,1.26e-07,1;CL:0000216,1.26e-07,1;CL:0000150,5.11e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060072!8.27e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.10e-08;1!DOID:3112;6.97e-08;1!DOID:3571;1.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.42e-08,143;DOID:3030,3.10e-08,1;DOID:3112,6.52e-08,1;DOID:3571,1.99e-07,1;DOID:162,4.58e-07,235;DOID:14566,7.74e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.22e-07!143;UBERON:0000914!5.16e-07!83;UBERON:0002329!5.16e-07!83;UBERON:0003077!5.16e-07!83;UBERON:0003059!5.16e-07!83;UBERON:0007282!5.16e-07!83;UBERON:0009618!5.16e-07!83;UBERON:0007285!5.16e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;9.10e-10;3!UBERON:0001235;9.10e-10;3!UBERON:0006858;9.10e-10;3!UBERON:0001136;1.31e-07;1!UBERON:0001343;1.31e-07;1!UBERON:0004910;1.31e-07;1!UBERON:0004813;1.31e-07;1!UBERON:0001708;1.81e-07;4!UBERON:0008895;1.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.81e-10,3;UBERON:0001235,7.81e-10,3;UBERON:0006858,7.81e-10,3;UBERON:0001136,1.26e-07,1;UBERON:0001343,1.26e-07,1;UBERON:0004910,1.26e-07,1;UBERON:0005154,1.26e-07,1;UBERON:0005295,1.26e-07,1;UBERON:0004813,1.26e-07,1;UBERON:0005297,1.26e-07,1;UBERON:0005294,1.26e-07,1;UBERON:0010141,1.26e-07,1;UBERON:0005891,1.26e-07,1;UBERON:0001708,1.49e-07,4;UBERON:0008895,1.49e-07,4 | |||
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| ||
|short_description=p11@PLOD2 | |||
}} | }} |
Latest revision as of 06:30, 25 September 2015
Short description: | p11@PLOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PLOD2_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | -55bp_to_ENST00000469350_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | C9JXZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.96e-26 | 19 |
cortical cell of adrenal gland | 2.63e-14 | 2 |
steroid hormone secreting cell | 7.81e-10 | 3 |
epithelial cell of Malassez | 8.52e-10 | 3 |
squamous epithelial cell | 1.54e-08 | 63 |
mucus secreting cell | 3.10e-08 | 1 |
epithelial cell | 3.89e-08 | 253 |
lining cell | 1.21e-07 | 58 |
barrier cell | 1.21e-07 | 58 |
androgen binding protein secreting cell | 1.26e-07 | 1 |
seminiferous tubule epithelial cell | 1.26e-07 | 1 |
Sertoli cell | 1.26e-07 | 1 |
glandular epithelial cell | 5.11e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 7.81e-10 | 3 |
adrenal cortex | 7.81e-10 | 3 |
adrenal/interrenal gland | 7.81e-10 | 3 |
mesothelium | 1.26e-07 | 1 |
seminiferous tubule of testis | 1.26e-07 | 1 |
epithelium of male gonad | 1.26e-07 | 1 |
epithelial cord | 1.26e-07 | 1 |
sex cord | 1.26e-07 | 1 |
seminiferous tubule epithelium | 1.26e-07 | 1 |
testis sex cord | 1.26e-07 | 1 |
genital ridge | 1.26e-07 | 1 |
primitive sex cord of indifferent gonad | 1.26e-07 | 1 |
coelomic epithelium | 1.26e-07 | 1 |
jaw skeleton | 1.49e-07 | 4 |
splanchnocranium | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.42e-08 | 143 |
mucinous adenocarcinoma | 3.10e-08 | 1 |
papillary adenocarcinoma | 6.52e-08 | 1 |
liver cancer | 1.99e-07 | 1 |
cancer | 4.58e-07 | 235 |
disease of cellular proliferation | 7.74e-07 | 239 |