FFCP PHASE1:Hg19::chr3:138666453..138666470,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:138666453..138666470,+
|short_description=p4@C3orf72
|description=CAGE_peak_4_at_C3orf72_5end
|association_with_transcript=0bp_to_ENST00000498709,uc011bmr....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401089 | |EntrezGene=401089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34428 | |HGNC=34428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498709,uc011bmr.1_5end | |||
|cluster_id=chr3:138666453..138666470,+ | |||
|coexpression_cluster_id=C770 | |||
|description=CAGE_peak_4_at_C3orf72_5end | |||
|id=chr3:138666453..138666470,+ | |||
|ontology_enrichment_celltype=CL:0002367!2.33e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.22e-17;1!CL:0002550;1.22e-17;1!CL:0000501;1.22e-17;1!CL:0002537;1.97e-14;5!CL:1000487;1.03e-09;2!CL:0000349;1.42e-08;19!CL:0002541;6.88e-07;3!CL:0000174;9.64e-07;3!CL:0002178;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,1.22e-17,1;CL:0000501,1.22e-17,1;CL:0002550,1.70e-17,1;CL:0002537,2.11e-14,5;CL:1000487,1.03e-09,2;CL:0000349,1.42e-08,19;CL:0002541,6.50e-07,3;CL:0000174,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.59e-07;10 | |||
|ontology_enrichment_disease=DOID:0060084!3.05e-12!3;DOID:127!3.05e-12!3;DOID:2394!7.62e-12!14;DOID:0060072!2.80e-09!4;DOID:193!1.77e-08!29;DOID:120!3.21e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:4929;7.98e-10;2!DOID:0060084;9.64e-07;3!DOID:127;9.64e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,7.98e-10,2;DOID:0060084,9.12e-07,3;DOID:127,9.12e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003134!5.48e-16!37;UBERON:0000474!5.48e-16!37;UBERON:0003100!4.16e-14!41;UBERON:0000992!7.51e-13!13;UBERON:0005156!6.73e-12!59;UBERON:0000990!6.73e-12!59;UBERON:0003133!1.40e-11!48;UBERON:0001737!1.31e-09!9;UBERON:0005795!2.13e-09!22;UBERON:0002119!5.69e-09!4;UBERON:0004531!5.69e-09!4;UBERON:0005969!2.33e-08!2;UBERON:0003956!2.33e-08!2;UBERON:0000007!3.01e-08!2;UBERON:0000991!1.45e-07!21;UBERON:0009196!1.45e-07!21;UBERON:0009117!1.45e-07!21;UBERON:0005564!1.45e-07!21;UBERON:0000995!1.51e-07!21;UBERON:0004176!3.56e-07!22;UBERON:0003975!3.70e-07!22;UBERON:0002118!6.51e-07!5;UBERON:0004532!6.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;6.78e-18;1!UBERON:0005631;9.56e-16;10!UBERON:0000158;9.56e-16;10!UBERON:0000305;1.39e-10;7!UBERON:0000478;6.75e-07;24!UBERON:0003124;6.88e-07;3!UBERON:0000920;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.98e-11,14;UBERON:0000158,1.98e-11,14;UBERON:0000305,1.46e-10,7;UBERON:0004871,2.35e-09,8;UBERON:0000920,6.50e-07,3;UBERON:0000478,6.75e-07,24 | |||
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| ||
|short_description=p4@C3orf72 | |||
}} | }} |
Latest revision as of 01:35, 25 September 2015
Short description: | p4@C3orf72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C3orf72_5end |
Coexpression cluster: | C770_Mesenchymal_chorionic_tubular_ovary_Smooth_mesenchymal_granulosa |
Association with transcript: | 0bp_to_ENST00000498709, uc011bmr.1_5end |
EntrezGene: | C3orf72 |
HGNC: | 34428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 1.22e-17 | 1 |
granulosa cell | 1.22e-17 | 1 |
fibroblast of the conjuctiva | 1.70e-17 | 1 |
amnion mesenchymal stem cell | 2.11e-14 | 5 |
smooth muscle cell of prostate | 1.03e-09 | 2 |
extraembryonic cell | 1.42e-08 | 19 |
chorionic membrane mesenchymal stem cell | 6.50e-07 | 3 |
steroid hormone secreting cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.98e-11 | 14 |
membranous layer | 1.98e-11 | 14 |
amnion | 1.46e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.35e-09 | 8 |
egg chorion | 6.50e-07 | 3 |
extraembryonic structure | 6.75e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 7.98e-10 | 2 |
cell type benign neoplasm | 9.12e-07 | 3 |
leiomyoma | 9.12e-07 | 3 |