FFCP PHASE1:Hg19::chr3:115342402..115342458,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:115342402..115342458,+
|short_description=p1@GAP43
|description=CAGE_peak_1_at_GAP43_5end
|association_with_transcript=45bp_to_ENST00000393780_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2596 | |EntrezGene=2596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4140 | |HGNC=4140 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0Y4 | |UniProt=A8K0Y4 | ||
|association_with_transcript=45bp_to_ENST00000393780_5end | |||
|cluster_id=chr3:115342402..115342458,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GAP43_5end | |||
|id=chr3:115342402..115342458,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.56e-12!180;CL:0000133!1.88e-07!59;CL:0002319!5.07e-07!25;CL:0000047!9.40e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.74e-07;6!CL:0000404;2.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.25e-09,8;CL:0000540,2.82e-07,6;CL:0000031,2.82e-07,6;CL:0000404,2.82e-07,6;CL:0000133,3.52e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.41e-13;82!CL:0000031;2.74e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.86e-42!82;UBERON:0000073!1.75e-40!94;UBERON:0001016!1.75e-40!94;UBERON:0005743!2.96e-40!86;UBERON:0001049!1.84e-39!57;UBERON:0005068!1.84e-39!57;UBERON:0006241!1.84e-39!57;UBERON:0007135!1.84e-39!57;UBERON:0003075!6.44e-35!86;UBERON:0007284!6.44e-35!86;UBERON:0000955!2.78e-33!69;UBERON:0006238!2.78e-33!69;UBERON:0002780!2.30e-32!41;UBERON:0001890!2.30e-32!41;UBERON:0006240!2.30e-32!41;UBERON:0002346!8.38e-32!90;UBERON:0002616!9.31e-32!59;UBERON:0003080!4.61e-31!42;UBERON:0002020!1.23e-27!34;UBERON:0003528!1.23e-27!34;UBERON:0001893!1.38e-27!34;UBERON:0002791!9.25e-27!33;UBERON:0003056!2.44e-26!61;UBERON:0001869!2.75e-26!32;UBERON:0004121!6.06e-24!169;UBERON:0007023!6.49e-24!115;UBERON:0000033!2.09e-23!123;UBERON:0000153!7.75e-23!129;UBERON:0007811!7.75e-23!129;UBERON:0000924!2.06e-22!173;UBERON:0006601!2.06e-22!173;UBERON:0000956!5.19e-21!25;UBERON:0000203!5.19e-21!25;UBERON:0002619!1.28e-19!22;UBERON:0001950!5.90e-18!20;UBERON:0000025!1.52e-12!194;UBERON:0000475!1.30e-11!365;UBERON:0003076!1.89e-09!15;UBERON:0003057!1.89e-09!15;UBERON:0004111!2.58e-08!241;UBERON:0002420!3.06e-08!9;UBERON:0007245!3.06e-08!9;UBERON:0010009!3.06e-08!9;UBERON:0010011!3.06e-08!9;UBERON:0000454!3.06e-08!9;UBERON:0002308!4.86e-08!9;UBERON:0000125!4.86e-08!9;UBERON:0004732!6.06e-08!13;UBERON:0001871!7.99e-08!7;UBERON:0000481!1.03e-07!347;UBERON:0000468!1.56e-07!659;UBERON:0004733!1.86e-07!12;UBERON:0002028!1.86e-07!12;UBERON:0007277!1.86e-07!12;UBERON:0000119!2.91e-07!312;UBERON:0000483!3.36e-07!309;UBERON:0000477!8.13e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.99e-34;32!UBERON:0003528;2.57e-34;34!UBERON:0002020;2.57e-34;34!UBERON:0001893;2.84e-34;34!UBERON:0002791;3.41e-34;32!UBERON:0002780;1.77e-33;41!UBERON:0001890;1.77e-33;41!UBERON:0000073;6.94e-33;53!UBERON:0002616;6.94e-33;53!UBERON:0000956;5.91e-30;25!UBERON:0000203;5.91e-30;25!UBERON:0002619;1.23e-29;22!UBERON:0001950;4.83e-27;20!UBERON:0001017;1.22e-22;75!UBERON:0000955;1.20e-21;68!UBERON:0001016;3.55e-20;83!UBERON:0002420;6.20e-12;9!UBERON:0007245;6.20e-12;9!UBERON:0010009;6.20e-12;9!UBERON:0010011;6.20e-12;9!UBERON:0000454;6.20e-12;9!UBERON:0004732;6.74e-12;13!UBERON:0000125;1.25e-11;9!UBERON:0002308;1.25e-11;9!UBERON:0004733;3.41e-11;12!UBERON:0002028;3.41e-11;12!UBERON:0001871;5.79e-10;6!UBERON:0007023;1.91e-09;114!UBERON:0000200;2.48e-09;6!UBERON:0009663;2.53e-09;7!UBERON:0001894;1.31e-08;7!UBERON:0002680;3.84e-08;9!UBERON:0001895;3.84e-08;9!UBERON:0002298;3.90e-08;6!UBERON:0010314;5.00e-08;132!UBERON:0000349;5.31e-08;5!UBERON:0011216;5.57e-08;132!UBERON:0001872;9.36e-08;5!UBERON:0002021;2.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.12e-64,81;UBERON:0001016,1.12e-62,89;UBERON:0001049,3.75e-61,56;UBERON:0005068,3.75e-61,56;UBERON:0006241,3.75e-61,56;UBERON:0007135,3.75e-61,56;UBERON:0000073,9.70e-58,53;UBERON:0002616,9.70e-58,53;UBERON:0003075,9.98e-56,82;UBERON:0007284,9.98e-56,82;UBERON:0002346,5.54e-52,86;UBERON:0000955,1.65e-49,68;UBERON:0006238,1.65e-49,68;UBERON:0002780,1.26e-47,41;UBERON:0001890,1.26e-47,41;UBERON:0003080,1.26e-47,41;UBERON:0006240,1.26e-47,41;UBERON:0003528,3.03e-40,34;UBERON:0002020,3.03e-40,34;UBERON:0010371,3.28e-40,104;UBERON:0001893,3.62e-40,34;UBERON:0003056,4.48e-39,61;UBERON:0001869,3.87e-38,32;UBERON:0002791,7.51e-38,32;UBERON:0010314,2.73e-35,132;UBERON:0004121,4.51e-34,171;UBERON:0000924,4.51e-34,171;UBERON:0006601,4.51e-34,171;UBERON:0000956,6.23e-30,25;UBERON:0000203,6.23e-30,25;UBERON:0002619,1.31e-29,22;UBERON:0001950,5.11e-27,20;UBERON:0007023,1.74e-26,114;UBERON:0011216,6.55e-23,223;UBERON:0000025,1.12e-18,192;UBERON:0003076,3.26e-14,15;UBERON:0003057,3.26e-14,15;UBERON:0002420,6.30e-12,9;UBERON:0007245,6.30e-12,9;UBERON:0010009,6.30e-12,9;UBERON:0010011,6.30e-12,9;UBERON:0000454,6.30e-12,9;UBERON:0004732,7.22e-12,13;UBERON:0004111,7.99e-12,240;UBERON:0000125,1.29e-11,9;UBERON:0002308,1.29e-11,9;UBERON:0004733,4.08e-11,12;UBERON:0002028,4.08e-11,12;UBERON:0007277,4.08e-11,12;UBERON:0001871,5.92e-10,6;UBERON:0000200,2.50e-09,6;UBERON:0009663,2.58e-09,7;UBERON:0000483,2.87e-09,306;UBERON:0000119,5.89e-09,309;UBERON:0001894,1.03e-08,7;UBERON:0006222,1.03e-08,7;UBERON:0002298,3.93e-08,6;UBERON:0002680,4.55e-08,9;UBERON:0001895,4.55e-08,9;UBERON:0010092,4.55e-08,9;UBERON:0000349,5.31e-08,5;UBERON:0001872,9.54e-08,5;UBERON:0002021,2.09e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,2.52687949370732,0.522371256399677,0,0,0,0,0.495065411840187,0,0.672325146451775,0.602694528023977,0.730310090387373,0,2.09305798730539,0,1.25381888591235,13.7393273822907,8.21246550437305,0.87879847716362,0,0.0821005894499457,0,0,0,3.40595471295367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0.316462387440884,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,2.00535164254356,0.869079113764942,3.1811437882044,2.43317435151318,2.45790524626576,0.886917589850256,0.351339142772504,12.312033096785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0,0.573673241497627,1.06400514659507,2.24271040056923,0,0.74000264525148,0.622422070799533,0,0,0,0,0.70296429550139,0.624320153660641,0.570471821544449,0.448346041655403,0.939475989150119,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0,0,0,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,1.0126579934476,1.26668106709558,0.252433774244115,0.184099797284599,0.484938170456436,0.355009592516614,0.705264687593482,0.339121184620975,0,0,0,1.46368447355514,1.85541675650079,2.67246068599892,7.3599349060913,4.03713361401005,1.09493207722749,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0,1.02940686179115,0.109750285408626,0,0,0,0,1.03993478527958,0,10.4337364477569,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0.414656231081544,0,0,0,0,0,8.55362230113526,0.102827492703324,0,0,0.224262168690721,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0.958499421966331,2.29723871668228,4.27910715122155,0,0,0,0,0,0,0,69.621927036955,95.0020933160638,58.7699497711048,72.534542889773,40.1901413541493,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0,0.234282829985426,0.601892199455438,0,4.1389228517002,1.32845119707087,3.13427586520895,0.781952530212746,0.391602314925481,1.02943027143257,0,0.215714200818617,0,0,0,0.30239029332968,0.744323423456331,0.920771839728375,0.841980283299221,0.128139149255701,1.53512174720011,0.804269605718038,0,0.925258162815933,4.26148140751505,3.20295908453856,1.55776328755086,1.85936605535935,0,0,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,1.25671933779759,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.255679882248303,0.623224249527161,0,0,0,0,0.464845549297286,0.62962469366128,1.3940745403212,0.924100740528266,3.19383618190213,0.869932992075073,0.37064843820784,0.429374660225974,0,0,0,0,0,9.22789418985217,0,0,0,0,1.2130948894399,1.58510321173008,0,0,0,0,0,0,12.4308928282267,5.51365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,1.42037263873893,8.0554109505935,3.66204283291914,1.00387946542836,0.0982490410131212,1.07001315444375,1.06428319221179,0.844430541190656,0,2.27683904259429,0.349934720244983,0,1.34060455107157,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,5.93929361665277,0,159.063623642608,146.296193066933,0,0,0,2.59022384726391,0.828851746593443,0,3.78394125257973,0.246169610922139,0,0.0898683511473268,0,0,0.887790650732402,0,0,44.5893063203801,99.6329374258282,63.8764153603821,0,0,0,0,0,0,9.30807107751954,1.45802306691627,8.16037476186474,39.8583623616228,96.356554461701,28.9905299002458,75.4150552730952,28.077023800587,119.565041448915,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,4.9769387140681,0,1.32686346755009,8.55442202907076,0,0,0,16.4458764472852,0,73.7933004034818,0,0,0.242780379534093,0,2.41981432097328,93.9643378205605,3.79119477770928,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,6.10148000107438,0.274083849293502,0.19871461170299,117.188283314331,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0,1.63085047288337,0.732219924186332,0.101998217636322,0.577901179803038,30.0210144354895,17.7976992559591,0,0,0.262887354279314,1.95497680890578,1.83328339209347,2.15361907373044,0,0,1.11585728720936,0.53746777989381,0,0,0,0,0,0,0,143.936573855484,114.95567475817,2.25054407851027,3.71356478812531,5.40072439437941,0.2249738915515,0,106.493972821517,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0.864221491201268,0.979762080328227,1.19730191562487,0,0.170388021785422,0,0,0,69.5542305225142,76.2982112055321,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,136.454499714916,15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| ||
|short_description=p1@GAP43 | |||
}} | }} |
Latest revision as of 17:54, 19 September 2015
Short description: | p1@GAP43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAP43_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 45bp_to_ENST00000393780_5end |
EntrezGene: | GAP43 |
HGNC: | 4140 |
UniProt: | A8K0Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.25e-09 | 8 |
neuron | 2.82e-07 | 6 |
neuroblast | 2.82e-07 | 6 |
electrically signaling cell | 2.82e-07 | 6 |
neurectodermal cell | 3.52e-07 | 59 |