FFCP PHASE1:Hg19::chr3:112359698..112359713,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:112359698..112359713,-
|short_description=p17@CCDC80
|description=CAGE_peak_17_at_CCDC80_5end
|association_with_transcript=189bp_to_ENST00000475181_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=189bp_to_ENST00000475181_5end | |||
|cluster_id=chr3:112359698..112359713,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_17_at_CCDC80_5end | |||
|id=chr3:112359698..112359713,- | |||
|ontology_enrichment_celltype=CL:0000055!1.32e-25!180;CL:0000057!1.15e-14!75;CL:0000680!3.11e-13!57;CL:0000056!3.11e-13!57;CL:0000355!3.11e-13!57;CL:0000187!4.46e-12!54;CL:0000183!2.62e-11!59;CL:0000192!2.64e-10!42;CL:0000514!2.64e-10!42;CL:0000359!3.22e-10!32;CL:0000393!1.07e-09!60;CL:0000211!1.07e-09!60;CL:0000136!6.71e-08!15;CL:0002494!1.47e-07!16;CL:0002620!2.91e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.41e-10;23!CL:0002494;1.16e-08;16!CL:0000136;1.33e-08;13!CL:0000359;2.01e-08;32!CL:0000499;4.08e-08;28!CL:1000306;8.78e-07;4!CL:0002547;8.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.07e-17,76;CL:0000048,7.41e-11,427;CL:0000723,2.74e-10,433;CL:0002620,2.91e-10,23;CL:0000136,3.76e-10,15;CL:0000034,1.45e-09,441;CL:0002494,4.84e-09,16;CL:0000359,9.01e-09,32;CL:0000680,2.07e-08,58;CL:0000056,2.07e-08,58;CL:0000355,2.07e-08,58;CL:0000499,4.87e-08,28;CL:0000187,1.17e-07,55;CL:0000192,1.93e-07,43;CL:0000514,1.93e-07,43;CL:1000306,8.67e-07,4;CL:0002547,8.67e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.36e-07;5!DOID:450;1.36e-07;5!DOID:66;1.36e-07;5!DOID:423;1.36e-07;5!DOID:0080000;1.36e-07;5!DOID:11722;1.36e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.14e-07,5;DOID:450,1.14e-07,5;DOID:66,1.14e-07,5;DOID:423,1.14e-07,5;DOID:0080000,1.14e-07,5;DOID:11722,1.14e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!3.52e-13!63;UBERON:0001015!3.52e-13!63;UBERON:0000383!3.52e-13!63;UBERON:0000914!5.69e-13!83;UBERON:0002329!5.69e-13!83;UBERON:0003077!5.69e-13!83;UBERON:0003059!5.69e-13!83;UBERON:0007282!5.69e-13!83;UBERON:0009618!5.69e-13!83;UBERON:0007285!5.69e-13!83;UBERON:0001134!8.99e-13!61;UBERON:0002036!8.99e-13!61;UBERON:0003082!8.99e-13!61;UBERON:0004872!6.77e-12!84;UBERON:0004290!2.60e-11!70;UBERON:0000486!8.19e-11!82;UBERON:0000948!2.99e-10!24;UBERON:0005498!2.99e-10!24;UBERON:0004140!2.99e-10!24;UBERON:0009881!2.99e-10!24;UBERON:0004141!2.99e-10!24;UBERON:0003084!2.99e-10!24;UBERON:0007005!2.99e-10!24;UBERON:0004139!2.99e-10!24;UBERON:0004291!2.99e-10!24;UBERON:0000475!2.87e-09!365;UBERON:0007100!5.73e-09!27;UBERON:0002049!2.13e-08!79;UBERON:0007798!2.13e-08!79;UBERON:0004535!4.35e-08!110;UBERON:0001009!8.99e-08!113;UBERON:0001637!1.64e-07!42;UBERON:0003509!1.64e-07!42;UBERON:0004572!1.64e-07!42;UBERON:0001981!3.32e-07!60;UBERON:0007500!3.32e-07!60;UBERON:0004537!3.32e-07!60;UBERON:0006965!3.32e-07!60;UBERON:0004573!7.24e-07!33;UBERON:0004571!7.24e-07!33;UBERON:0004923!8.56e-07!57;UBERON:0000477!9.27e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.21e-10;22!UBERON:0003688;1.19e-09;6!UBERON:0002358;1.19e-09;6!UBERON:0003684;1.19e-09;6!UBERON:0001178;1.19e-09;6!UBERON:0007100;8.09e-09;25!UBERON:0004457;5.98e-08;9!UBERON:0000042;5.98e-08;9!UBERON:0002384;8.32e-07;198!UBERON:0004797;8.78e-07;4!UBERON:0000415;8.78e-07;4!UBERON:0007240;8.78e-07;4!UBERON:0005742;8.78e-07;4!UBERON:0005734;8.78e-07;4!UBERON:0004664;8.78e-07;4!UBERON:0004663;8.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,9.42e-13,24;UBERON:0005498,9.42e-13,24;UBERON:0004140,9.42e-13,24;UBERON:0009881,9.42e-13,24;UBERON:0004141,9.42e-13,24;UBERON:0003084,9.42e-13,24;UBERON:0007005,9.42e-13,24;UBERON:0004139,9.42e-13,24;UBERON:0004291,9.42e-13,24;UBERON:0004872,3.20e-11,83;UBERON:0007100,1.00e-10,27;UBERON:0004797,9.87e-10,7;UBERON:0003688,1.25e-09,6;UBERON:0002358,1.25e-09,6;UBERON:0003684,1.25e-09,6;UBERON:0001178,1.25e-09,6;UBERON:0002385,3.17e-08,64;UBERON:0001015,3.17e-08,64;UBERON:0000383,3.17e-08,64;UBERON:0001134,4.98e-08,62;UBERON:0002036,4.98e-08,62;UBERON:0003082,4.98e-08,62;UBERON:0001637,8.91e-08,42;UBERON:0003509,8.91e-08,42;UBERON:0004572,8.91e-08,42;UBERON:0004535,1.29e-07,109;UBERON:0007500,2.95e-07,59;UBERON:0001981,2.95e-07,59;UBERON:0004537,2.95e-07,59;UBERON:0006965,2.95e-07,59;UBERON:0002097,3.13e-07,41;UBERON:0001009,3.88e-07,112;UBERON:0007524,4.02e-07,73;UBERON:0000415,8.67e-07,4;UBERON:0007240,8.67e-07,4;UBERON:0005742,8.67e-07,4;UBERON:0005734,8.67e-07,4;UBERON:0004664,8.67e-07,4;UBERON:0004663,8.67e-07,4;UBERON:0002329,9.28e-07,71;UBERON:0003059,9.28e-07,71;UBERON:0007282,9.28e-07,71;UBERON:0004290,9.28e-07,71;UBERON:0009618,9.28e-07,71 | |||
|phase1_expression=7.08545679155171,6.85121676451146,11.5582611358696,6.00439790118782,9.38618298297304,7.85104671690332,0,0.631719873426831,1.82829939739887,0,0,0.436882744260345,1.31883489114227,1.11389717664042,1.32558950291166,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,1.10808952269109,1.02000345622126,1.25381888591235,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,2.01210257911091,2.81297636055767,1.80719576192283,1.00267582127178,3.0417768981773,1.5905718941022,3.89307896242109,0.283604451492204,0.443458794925128,0.527008714158756,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,10.4364109856017,8.35761376986227,4.50191214764944,20.3654000731658,4.965357350777,3.92474320099615,0,1.97334038733728,3.42332138939743,0.538842688278752,0.326923806226917,1.36221684880438,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,1.7308685049499,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,1.5324389789951,1.80285670687916,1.36118619792025,3.7671823494661,5.33893472046419,5.29829752898905,4.80145753735044,3.81294358182224,2.57640540045629,3.53622027030021,6.41350062516812,6.04109431999431,1.7670364197088,3.95814564161887,3.23292113637624,6.03516307278244,2.31729825923573,2.54340888465731,0,0.545492241181669,0,0,0,0,0,0,0,0,2.57296375277154,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,2.34817388471643,0.721832238805369,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0.285826432630578,0.224262168690721,1.30788020649984,1.24675085895615,3.10252117818667,0,0,1.59562869950922,1.04007436911366,0,0,0.266422179016099,0.57191197463259,0,0,0,0.355391948742546,0,0.602878754119172,0,1.19967589418468,0,0,0,0.718874566474748,3.44585807502342,0,3.61953266668948,1.02738161275192,0.895304816199478,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,2.20844685094452,0,1.08506009479894,3.74347550755453,1.96271887676878,2.68094105557689,4.21709093973768,2.70851489754947,0,1.03473071292505,1.32845119707087,1.65932251687533,1.56390506042549,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,4.96215615637554,6.90578879796281,4.2099014164961,13.0701932240815,6.65219423786715,8.36440389946759,2.96836132889982,0.616838775210622,0.532685175939381,1.31403449622095,0,0.348631135379878,0,0,0,2.75554675595056,1.27463817604702,2.49136388422906,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0.915694648183434,0.247528499761764,0.574265537996172,0,4.82051789532479,0,0.770243085573222,0.460511024178389,0.137836572484531,0.537101224341368,0.580066775656914,0.255679882248303,2.8490251406956,0,0,0,0.10115778085555,0.929691098594572,16.9998667288546,1.3940745403212,2.7723022215848,2.66153015158511,0,1.11194531462352,1.5743737541619,1.86079184679834,1.89827654831236,2.09693213316207,0,0.855877976067841,0,0.78494864019923,1.07923474549989,0.823611089208164,0.471249609382746,1.81964233415984,1.58510321173008,0.421258456238981,0.48763373908959,0.731140468893853,1.05650146756755,1.9109987597118,1.55545975149084,3.39024349860728,0,1.32687795048244,1.31535265576129,0.578775534266688,0,1.82619339266434,0.30982349809975,1.40847801266121,0.430234056612155,1.96498082026242,1.426684205925,0,3.16661452946496,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0.23874448473769,1.18785872333055,0.921482106297696,0,0.281338832821026,0.445234820091624,0,0,2.98871982376605,0.828851746593443,0,0,0,4.97663340258892,0.0898683511473268,0,0,0.986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.774054819518572,0,0,0,0.139423744278603,2.38545801361771,0.341826167541004,0,0,0,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.432777279484182,0,0.442287822516696,0.611030144933625,0,0,0,0.539209063845416,0.802577647298789,0.234264445725339,0,0.19566461893209,0,1.18375320854817,0,0,4.23350083510869,0,0,0,0,0,0,0,0,0.173559738335131,0,0.435296032902013,1.92199335066233,0.343972064943233,0,0,0,0.581934098930517,0,0.225980740780532,0.137041924646751,0,0.189932387867636,0,0.881747022766871,0.426905989478705,0,0,0,0,0,0.621262677827163,0,0.135904206073614,0.523014231561666,1.83596791745379,0.577901179803038,0,0.54762151556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| ||
|short_description=p17@CCDC80 | |||
}} | }} |
Latest revision as of 14:38, 19 September 2015
Short description: | p17@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 189bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.07e-17 | 76 |
multi fate stem cell | 7.41e-11 | 427 |
somatic stem cell | 2.74e-10 | 433 |
skin fibroblast | 2.91e-10 | 23 |
fat cell | 3.76e-10 | 15 |
stem cell | 1.45e-09 | 441 |
cardiocyte | 4.84e-09 | 16 |
vascular associated smooth muscle cell | 9.01e-09 | 32 |
muscle precursor cell | 2.07e-08 | 58 |
myoblast | 2.07e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-08 | 58 |
stromal cell | 4.87e-08 | 28 |
muscle cell | 1.17e-07 | 55 |
smooth muscle cell | 1.93e-07 | 43 |
smooth muscle myoblast | 1.93e-07 | 43 |
fibroblast of tunica adventitia of artery | 8.67e-07 | 4 |
fibroblast of the aortic adventitia | 8.67e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.14e-07 | 5 |
myotonic disease | 1.14e-07 | 5 |
muscle tissue disease | 1.14e-07 | 5 |
myopathy | 1.14e-07 | 5 |
muscular disease | 1.14e-07 | 5 |
myotonic dystrophy | 1.14e-07 | 5 |