FFCP PHASE1:Hg19::chr3:112359529..112359540,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:112359529..112359540,-
|short_description=p23@CCDC80
|description=CAGE_peak_23_at_CCDC80_5end
|association_with_transcript=362bp_to_ENST00000475181_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=362bp_to_ENST00000475181_5end | |||
|cluster_id=chr3:112359529..112359540,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_23_at_CCDC80_5end | |||
|id=chr3:112359529..112359540,- | |||
|ontology_enrichment_celltype=CL:0000055!4.98e-23!180;CL:0000057!1.15e-15!75;CL:0000680!6.40e-11!57;CL:0000056!6.40e-11!57;CL:0000355!6.40e-11!57;CL:0000187!1.28e-09!54;CL:0000136!1.83e-08!15;CL:0000222!2.25e-08!119;CL:0000183!3.44e-08!59;CL:0002620!4.55e-08!23;CL:0000393!2.17e-07!60;CL:0000211!2.17e-07!60;CL:0002494!2.69e-07!16;CL:0002334!4.24e-07!12;CL:0000192!6.21e-07!42;CL:0000514!6.21e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.05e-13;23!CL:0002494;1.81e-08;16!CL:1000306;1.97e-08;4!CL:0002547;1.97e-08;4!CL:0000499;1.18e-07;28!CL:0002334;5.50e-07;12!CL:0000327;7.83e-07;15!CL:0000737;8.10e-07;4!CL:0002615;8.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.15e-16,76;CL:0002620,1.71e-13,23;CL:0000048,1.20e-10,427;CL:0000723,3.54e-10,433;CL:0000034,1.41e-09,441;CL:1000306,2.09e-08,4;CL:0002547,2.09e-08,4;CL:0002494,2.25e-08,16;CL:0000136,2.26e-08,15;CL:0000499,7.74e-08,28;CL:0002320,7.93e-08,361;CL:0000134,4.28e-07,354;CL:0000737,5.41e-07,4;CL:0000327,5.61e-07,15;CL:0002334,6.05e-07,12;CL:0002615,8.26e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.12e-08;5!DOID:450;1.12e-08;5!DOID:66;1.12e-08;5!DOID:423;1.12e-08;5!DOID:0080000;1.12e-08;5!DOID:11722;1.12e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.31e-09,5;DOID:450,6.31e-09,5;DOID:66,6.31e-09,5;DOID:423,6.31e-09,5;DOID:0080000,6.31e-09,5;DOID:11722,6.31e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.05e-13!84;UBERON:0002385!3.19e-11!63;UBERON:0001015!3.19e-11!63;UBERON:0000383!3.19e-11!63;UBERON:0001134!8.40e-11!61;UBERON:0002036!8.40e-11!61;UBERON:0003082!8.40e-11!61;UBERON:0004290!2.51e-09!70;UBERON:0000914!6.42e-09!83;UBERON:0002329!6.42e-09!83;UBERON:0003077!6.42e-09!83;UBERON:0003059!6.42e-09!83;UBERON:0007282!6.42e-09!83;UBERON:0009618!6.42e-09!83;UBERON:0007285!6.42e-09!83;UBERON:0000948!1.50e-08!24;UBERON:0005498!1.50e-08!24;UBERON:0004140!1.50e-08!24;UBERON:0009881!1.50e-08!24;UBERON:0004141!1.50e-08!24;UBERON:0003084!1.50e-08!24;UBERON:0007005!1.50e-08!24;UBERON:0004139!1.50e-08!24;UBERON:0004291!1.50e-08!24;UBERON:0004535!1.51e-08!110;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0000486!3.22e-08!82;UBERON:0001009!3.39e-08!113;UBERON:0004923!1.04e-07!57;UBERON:0007100!1.90e-07!27;UBERON:0001637!4.17e-07!42;UBERON:0003509!4.17e-07!42;UBERON:0004572!4.17e-07!42;UBERON:0001981!5.52e-07!60;UBERON:0007500!5.52e-07!60;UBERON:0004537!5.52e-07!60;UBERON:0006965!5.52e-07!60;UBERON:0000055!8.09e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.59e-13;9!UBERON:0000042;6.59e-13;9!UBERON:0003688;6.77e-12;6!UBERON:0002358;6.77e-12;6!UBERON:0003684;6.77e-12;6!UBERON:0001178;6.77e-12;6!UBERON:0004797;1.97e-08;4!UBERON:0000415;1.97e-08;4!UBERON:0007240;1.97e-08;4!UBERON:0005742;1.97e-08;4!UBERON:0005734;1.97e-08;4!UBERON:0004664;1.97e-08;4!UBERON:0004663;1.97e-08;4!UBERON:0002097;3.19e-08;41!UBERON:0002199;9.02e-08;46!UBERON:0002416;9.02e-08;46!UBERON:0000948;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.63e-12,6;UBERON:0002358,7.63e-12,6;UBERON:0003684,7.63e-12,6;UBERON:0001178,7.63e-12,6;UBERON:0002097,2.68e-11,41;UBERON:0002199,1.64e-10,46;UBERON:0002416,1.64e-10,46;UBERON:0004872,1.10e-09,83;UBERON:0004457,3.12e-09,12;UBERON:0000042,3.12e-09,12;UBERON:0000415,2.09e-08,4;UBERON:0007240,2.09e-08,4;UBERON:0005742,2.09e-08,4;UBERON:0005734,2.09e-08,4;UBERON:0004664,2.09e-08,4;UBERON:0004663,2.09e-08,4;UBERON:0002384,4.93e-08,371;UBERON:0000948,1.78e-07,24;UBERON:0005498,1.78e-07,24;UBERON:0004140,1.78e-07,24;UBERON:0009881,1.78e-07,24;UBERON:0004141,1.78e-07,24;UBERON:0003084,1.78e-07,24;UBERON:0007005,1.78e-07,24;UBERON:0004139,1.78e-07,24;UBERON:0004291,1.78e-07,24;UBERON:0004797,5.17e-07,7 | |||
|phase1_expression=2.54349730978779,8.34992043174834,9.3029906703341,6.00439790118782,8.93922188854576,13.0850778615055,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0.218441372130172,0.791300934685361,0.618831764800233,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.61560529038394,0.408001382488506,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,2.81297636055767,1.44575660953827,1.50401373190767,1.88300474649071,0,2.43317435151318,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,4.96971951695318,6.71141711822273,5.03154887090231,17.4970338656776,4.25602058638028,3.36406560085384,1.06748995729705,0.98667019366864,2.48968828319813,0.269421344139376,0.490385709340376,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0.23486899728753,0,0,0,0,0.309977343527296,0,0.494533858557114,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0.907457465280168,3.22901344239952,3.20336083227851,2.96704661623387,3.60109315301283,1.54578793857658,2.83404594050192,1.48893485065272,4.21940830603166,2.92311015483596,3.02920529092937,2.57739716198438,1.45481451136931,8.16522062788213,3.12331504505685,2.03472710772585,0,0,0,0,0,0,0.207322110030741,0,0,0,2.57296375277154,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,1.40890433082986,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.897048674762886,1.30788020649984,1.10007428731425,3.23179289394444,0,0,0.531876233169741,1.04007436911366,1.02882949704857,0,0.532844358032199,0.142977993658148,0,1.64648067356154,0,0,0.791951872933429,0.904318131178758,0,0.299918973546171,0,0,0,1.19812427745791,2.29723871668228,1.42636905040718,3.18518874668674,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,2.00068208423871,1.08506009479894,0.207970861530807,2.3195768543631,0.630809660135739,1.05427273493442,0.300946099727719,4.5481500811197,0,1.32845119707087,0,0.434418072340414,0.195801157462741,0,0,0,0,1.21251028578504,4.99306318531491,2.72151263996712,6.20269519546942,2.30192959932094,5.61320188866147,14.2234455673828,3.07024349440022,13.3508754549194,4.45254199334973,0.771048469013278,0.887808626565635,0.410635780069046,0,0.464841513839837,0,0,0,1.37777337797528,0.364182336013434,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,1.62689197332152,0.309123034943167,0.27470839445503,0.330037999682352,0.574265537996172,1.30012049207304,1.6068392984416,0,0.924291702687866,0.307007349452259,0,0.429680979473094,0.870100163485371,0.255679882248303,0.534192213880424,0,0,0.127612712494584,0,0.464845549297286,11.6480568327337,0,0.308033580176089,1.06461206063404,0.869932992075073,0.18532421910392,1.28812398067792,0.744316738719335,1.2655176988749,0.571890581771475,0.255897791311334,0.855877976067841,0.318203247925937,0,0.539617372749944,1.64722217841633,0.706874414074119,1.01091240786658,0,0,0,0.487426979262569,3.16950440270266,0.818999468447914,1.41405431953713,3.39024349860728,0,0.66343897524122,1.31535265576129,0,0.655894752046633,2.23201414658974,0.92947049429925,0,0,2.35797698431491,2.1400263088875,0,2.74439925886963,3.62224382255892,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.47748896947538,1.18785872333055,0.921482106297696,0,0,0.445234820091624,0,0,0.398495976502139,0.276283915531148,0,0,0,1.55519793830904,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0.173559738335131,0,0.609414446062818,1.39781334593624,0,0.0967563312890851,0,0,0.0969890164884194,0,0.90392296312213,0,0,0.126621591911757,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.104602846312333,1.01998217636322,0,0,0,0,1.28929632425987,0,7.81990723562312,0.687481272035051,0.717873024576814,0,0,0.223171457441873,0.335917362433631,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,2.17199840701485,3.45688596480507,5.22539776175055,0,0,1.36310417428337,0.113312091520126,0,0,0.25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| ||
|short_description=p23@CCDC80 | |||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p23@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 362bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.15e-16 | 76 |
skin fibroblast | 1.71e-13 | 23 |
multi fate stem cell | 1.20e-10 | 427 |
somatic stem cell | 3.54e-10 | 433 |
stem cell | 1.41e-09 | 441 |
fibroblast of tunica adventitia of artery | 2.09e-08 | 4 |
fibroblast of the aortic adventitia | 2.09e-08 | 4 |
cardiocyte | 2.25e-08 | 16 |
fat cell | 2.26e-08 | 15 |
stromal cell | 7.74e-08 | 28 |
connective tissue cell | 7.93e-08 | 361 |
mesenchymal cell | 4.28e-07 | 354 |
striated muscle cell | 5.41e-07 | 4 |
extracellular matrix secreting cell | 5.61e-07 | 15 |
preadipocyte | 6.05e-07 | 12 |
adipocyte of omentum tissue | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.63e-12 | 6 |
peritoneum | 7.63e-12 | 6 |
abdominal cavity | 7.63e-12 | 6 |
visceral peritoneum | 7.63e-12 | 6 |
skin of body | 2.68e-11 | 41 |
integument | 1.64e-10 | 46 |
integumental system | 1.64e-10 | 46 |
splanchnic layer of lateral plate mesoderm | 1.10e-09 | 83 |
cavity lining | 3.12e-09 | 12 |
serous membrane | 3.12e-09 | 12 |
artery wall | 2.09e-08 | 4 |
tunica adventitia of artery | 2.09e-08 | 4 |
adventitia | 2.09e-08 | 4 |
tunica adventitia of blood vessel | 2.09e-08 | 4 |
aorta tunica adventitia | 2.09e-08 | 4 |
aorta wall | 2.09e-08 | 4 |
connective tissue | 4.93e-08 | 371 |
heart | 1.78e-07 | 24 |
primitive heart tube | 1.78e-07 | 24 |
primary heart field | 1.78e-07 | 24 |
anterior lateral plate mesoderm | 1.78e-07 | 24 |
heart tube | 1.78e-07 | 24 |
heart primordium | 1.78e-07 | 24 |
cardiac mesoderm | 1.78e-07 | 24 |
cardiogenic plate | 1.78e-07 | 24 |
heart rudiment | 1.78e-07 | 24 |
blood vessel layer | 5.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.31e-09 | 5 |
myotonic disease | 6.31e-09 | 5 |
muscle tissue disease | 6.31e-09 | 5 |
myopathy | 6.31e-09 | 5 |
muscular disease | 6.31e-09 | 5 |
myotonic dystrophy | 6.31e-09 | 5 |