FFCP PHASE1:Hg19::chr3:106569439..106569463,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:106569439..106569463,-
|short_description=p@chr3:106569439..106569463,-
|description=CAGE_peak_at_chr3:106569439..106569463,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:106569439..106569463,- | |||
|description=CAGE_peak_at_chr3:106569439..106569463,- | |||
|id=chr3:106569439..106569463,- | |||
|ontology_enrichment_celltype=CL:0000055!3.05e-39!180;CL:0000359!5.69e-26!32;CL:0000680!5.86e-22!57;CL:0000056!5.86e-22!57;CL:0000355!5.86e-22!57;CL:0000187!1.06e-20!54;CL:0000192!4.04e-19!42;CL:0000514!4.04e-19!42;CL:0000183!4.57e-18!59;CL:0000393!1.36e-17!60;CL:0000211!1.36e-17!60;CL:0000057!9.88e-16!75;CL:0000048!1.76e-12!430;CL:0000723!6.21e-12!436;CL:0000034!3.14e-11!444;CL:0002540!6.41e-10!6;CL:0002539!1.17e-09!10;CL:0002595!3.42e-09!5;CL:0002620!6.04e-09!23;CL:0002494!1.11e-08!16;CL:0000222!1.24e-08!119;CL:1000306!1.50e-07!4;CL:0002547!1.50e-07!4;CL:0002092!1.57e-07!10;CL:0002371!3.11e-07!591;CL:0002594!8.91e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.48e-35;32!CL:0000192;1.17e-19;43!CL:0002595;2.05e-16;5!CL:0002540;3.62e-13;6!CL:1000306;4.30e-13;4!CL:0002547;4.30e-13;4!CL:0000187;2.06e-12;55!CL:0002092;5.43e-11;10!CL:0002539;5.73e-11;10!CL:0000393;5.80e-10;61!CL:0000211;5.80e-10;61!CL:0002592;3.19e-09;3!CL:0000153;5.14e-08;9!CL:0000447;5.14e-08;9!CL:0002593;1.07e-07;2!CL:0002589;2.47e-07;2!CL:0002594;4.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.38e-37,32;CL:0000192,4.05e-26,43;CL:0000514,4.05e-26,43;CL:0000680,6.58e-24,58;CL:0000056,6.58e-24,58;CL:0000355,6.58e-24,58;CL:0000187,2.68e-23,55;CL:0000393,2.12e-20,61;CL:0000211,2.12e-20,61;CL:0002595,2.06e-16,5;CL:1000306,3.17e-13,4;CL:0002547,3.17e-13,4;CL:0002540,4.12e-13,6;CL:0000222,2.41e-12,121;CL:0000048,1.62e-11,427;CL:0000723,3.60e-11,433;CL:0002539,5.25e-11,10;CL:0002092,5.94e-11,10;CL:0000034,1.00e-10,441;CL:0002592,3.15e-09,3;CL:0000153,5.31e-08,9;CL:0000447,5.31e-08,9;CL:0002593,1.02e-07,2;CL:0002589,2.63e-07,2;CL:0002594,3.28e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.17e-19;43!CL:0000355;2.78e-13;58 | |||
|ontology_enrichment_disease=DOID:17!5.03e-07!5;DOID:450!5.03e-07!5;DOID:66!5.03e-07!5;DOID:423!5.03e-07!5;DOID:0080000!5.03e-07!5;DOID:11722!5.03e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.35e-34;33!UBERON:0004571;1.35e-34;33!UBERON:0001637;2.25e-26;42!UBERON:0003509;2.25e-26;42!UBERON:0004572;2.25e-26;42!UBERON:0003834;2.05e-16;5!UBERON:0001533;2.05e-16;5!UBERON:0007500;1.68e-13;56!UBERON:0001981;1.68e-13;56!UBERON:0004537;1.68e-13;56!UBERON:0000947;3.37e-13;21!UBERON:0010191;3.37e-13;21!UBERON:0004797;4.30e-13;4!UBERON:0000415;4.30e-13;4!UBERON:0007240;4.30e-13;4!UBERON:0005742;4.30e-13;4!UBERON:0005734;4.30e-13;4!UBERON:0004664;4.30e-13;4!UBERON:0004663;4.30e-13;4!UBERON:0002371;6.51e-12;12!UBERON:0003513;1.32e-11;7!UBERON:0004237;5.73e-11;10!UBERON:0004695;5.73e-11;10!UBERON:0002111;5.73e-11;10!UBERON:0004178;5.73e-11;10!UBERON:0000055;1.94e-10;65!UBERON:0003498;3.19e-09;3!UBERON:0005985;3.19e-09;3!UBERON:0001621;3.19e-09;3!UBERON:0002204;8.02e-09;70!UBERON:0002049;1.69e-08;75!UBERON:0007798;1.69e-08;75!UBERON:0001434;1.81e-08;36!UBERON:0003914;2.98e-08;74!UBERON:0002456;1.07e-07;2!UBERON:0001474;1.41e-07;18!UBERON:0001529;2.47e-07;2!UBERON:0007204;2.47e-07;2!UBERON:0001310;4.25e-07;4!UBERON:0001135;4.69e-07;15 | |||
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|short_description=p@chr3:106569439..106569463,- | |||
}} | }} |
Latest revision as of 13:59, 29 July 2015
Short description: | p@chr3:106569439..106569463, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:106569439..106569463, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.38e-37 | 32 |
smooth muscle cell | 4.05e-26 | 43 |
smooth muscle myoblast | 4.05e-26 | 43 |
muscle precursor cell | 6.58e-24 | 58 |
myoblast | 6.58e-24 | 58 |
multi-potent skeletal muscle stem cell | 6.58e-24 | 58 |
muscle cell | 2.68e-23 | 55 |
electrically responsive cell | 2.12e-20 | 61 |
electrically active cell | 2.12e-20 | 61 |
smooth muscle cell of the subclavian artery | 2.06e-16 | 5 |
fibroblast of tunica adventitia of artery | 3.17e-13 | 4 |
fibroblast of the aortic adventitia | 3.17e-13 | 4 |
mesenchymal stem cell of the bone marrow | 4.12e-13 | 6 |
mesodermal cell | 2.41e-12 | 121 |
multi fate stem cell | 1.62e-11 | 427 |
somatic stem cell | 3.60e-11 | 433 |
aortic smooth muscle cell | 5.25e-11 | 10 |
bone marrow cell | 5.94e-11 | 10 |
stem cell | 1.00e-10 | 441 |
smooth muscle cell of the coronary artery | 3.15e-09 | 3 |
GAG secreting cell | 5.31e-08 | 9 |
carbohydrate secreting cell | 5.31e-08 | 9 |
smooth muscle cell of the internal thoracic artery | 1.02e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.63e-07 | 2 |
smooth muscle cell of the umbilical artery | 3.28e-07 | 4 |