FFCP PHASE1:Hg19::chr2:85843252..85843321,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:85843252..85843321,+
|short_description=p1@USP39
|description=CAGE_peak_1_at_USP39_5end
|association_with_transcript=0bp_to_ENST00000323701,ENST00000409025...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10713 | |EntrezGene=10713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20071 | |HGNC=20071 | ||
|TSSclassifier=strong | |||
|UniProt=Q53GS9,B9A018,G5E9H0,F8WC91 | |UniProt=Q53GS9,B9A018,G5E9H0,F8WC91 | ||
|association_with_transcript=0bp_to_ENST00000323701,ENST00000409025,ENST00000409470,ENST00000409766,ENST00000455732,ENST00000458268,NM_006590,uc002sqe.2,uc002sqf.2,uc002sqg.2,uc010fgn.1,uc010fgo.2_5end | |||
|cluster_id=chr2:85843252..85843321,+ | |||
|description=CAGE_peak_1_at_USP39_5end | |||
|id=chr2:85843252..85843321,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.83e-11!254;CL:0000012!1.44e-10!682;CL:0000003!4.28e-10!722;CL:0000548!5.09e-10!679;CL:0000004!5.09e-10!679;CL:0000255!5.09e-10!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.70e-25!235;DOID:14566!4.13e-24!239;DOID:2531!1.21e-18!51;DOID:0060083!1.21e-18!51;DOID:1240!6.43e-16!39;DOID:0050686!1.09e-14!137;DOID:8692!3.97e-12!31;DOID:0050687!3.26e-11!143;DOID:305!2.26e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.28e-13;39!DOID:2531;2.14e-12;51!DOID:0060083;2.14e-12;51!DOID:8692;9.96e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.70e-25,235;DOID:14566,4.13e-24,239;DOID:2531,1.21e-18,51;DOID:0060083,1.21e-18,51;DOID:1240,6.43e-16,39;DOID:0050686,1.09e-14,137;DOID:8692,3.97e-12,31;DOID:0050687,3.26e-11,143;DOID:305,2.26e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@USP39 | |||
}} | }} |
Latest revision as of 16:50, 18 September 2015
Short description: | p1@USP39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP39_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323701, ENST00000409025, ENST00000409470, ENST00000409766, ENST00000455732, ENST00000458268, NM_006590, uc002sqe.2, uc002sqf.2, uc002sqg.2, uc010fgn.1, uc010fgo.2_5end |
EntrezGene: | USP39 |
HGNC: | 20071 |
UniProt: | Q53GS9B9A018G5E9H0F8WC91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.70e-25 | 235 |
disease of cellular proliferation | 4.13e-24 | 239 |
hematologic cancer | 1.21e-18 | 51 |
immune system cancer | 1.21e-18 | 51 |
leukemia | 6.43e-16 | 39 |
organ system cancer | 1.09e-14 | 137 |
myeloid leukemia | 3.97e-12 | 31 |
cell type cancer | 3.26e-11 | 143 |
carcinoma | 2.26e-09 | 106 |