FFCP PHASE1:Hg19::chr2:64681553..64681567,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:64681553..64681567,+
|short_description=p6@LGALSL
|description=CAGE_peak_6_at_LGALSL_5end
|association_with_transcript=-13bp_to_ENST00000462737_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29094 | |EntrezGene=29094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25012 | |HGNC=25012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000462737_5end | |||
|cluster_id=chr2:64681553..64681567,+ | |||
|description=CAGE_peak_6_at_LGALSL_5end | |||
|id=chr2:64681553..64681567,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.92e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.01e-17;5!CL:0002321;2.01e-13;15!CL:0002253;2.48e-08;2!CL:0000317;7.28e-08;2!CL:1000448;7.28e-08;2!CL:0002308;7.28e-08;2!CL:0002140;7.28e-08;2!CL:0000333;9.74e-07;5!CL:0000622;9.74e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.91e-18,5;CL:0002253,2.22e-08,2;CL:0000317,1.63e-07,2;CL:1000448,1.63e-07,2;CL:0002308,1.63e-07,2;CL:0002140,1.63e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.20e-11!143;DOID:3095!1.86e-09!22;DOID:2994!1.86e-09!22;DOID:305!1.80e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.62e-14;22!DOID:2994;7.62e-14;22!DOID:171;1.33e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.76e-14,22;DOID:2994,8.76e-14,22;DOID:171,1.07e-08,10;DOID:0050687,7.88e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.45e-14!173;UBERON:0006601!1.45e-14!173;UBERON:0000481!3.38e-14!347;UBERON:0004121!1.55e-13!169;UBERON:0000922!4.67e-12!612;UBERON:0000033!3.74e-11!123;UBERON:0002346!9.86e-11!90;UBERON:0000153!1.39e-10!129;UBERON:0007811!1.39e-10!129;UBERON:0000073!4.71e-10!94;UBERON:0001016!4.71e-10!94;UBERON:0003075!1.06e-09!86;UBERON:0007284!1.06e-09!86;UBERON:0002050!1.62e-09!605;UBERON:0005423!1.62e-09!605;UBERON:0000923!3.24e-09!604;UBERON:0005291!3.24e-09!604;UBERON:0006598!3.24e-09!604;UBERON:0002532!3.24e-09!604;UBERON:0000468!3.29e-09!659;UBERON:0003056!8.76e-09!61;UBERON:0005743!1.01e-08!86;UBERON:0000475!4.22e-08!365;UBERON:0000483!7.81e-08!309;UBERON:0000119!1.11e-07!312;UBERON:0001017!1.73e-07!82;UBERON:0007023!2.10e-07!115;UBERON:0000064!4.50e-07!219;UBERON:0001048!6.78e-07!168;UBERON:0004119!7.46e-07!169;UBERON:0000925!7.46e-07!169;UBERON:0006595!7.46e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.28e-08;2!UBERON:0005090;7.28e-08;2!UBERON:0001630;7.28e-08;2!UBERON:0007771;7.28e-08;2!UBERON:0003297;7.28e-08;2!UBERON:0001821;7.28e-08;2!UBERON:0003487;7.28e-08;2!UBERON:0001820;7.28e-08;2!UBERON:0000922;2.05e-07;49!UBERON:0000013;9.74e-07;5!UBERON:0002410;9.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.43e-08,2;UBERON:0001630,6.43e-08,2;UBERON:0002419,1.63e-07,2;UBERON:0007771,1.63e-07,2;UBERON:0003297,1.63e-07,2;UBERON:0001821,1.63e-07,2;UBERON:0003487,1.63e-07,2;UBERON:0001820,1.63e-07,2;UBERON:0005089,1.63e-07,2;UBERON:0005088,1.63e-07,2;UBERON:0000013,6.26e-07,5;UBERON:0002410,6.26e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.85870796139317,0.273748850145768,0.376627918784408,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.767175371061182,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,1.34171076742555,1.98794652482228,1.62671520017326,1.86589899027667,1.7662459561294,3.28479623168247,0,0,0,0,0,0.473227200159376,1.01150814046861,0.241011029883482,0.220587945464788,0.217879444092406,1.18635309555548,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.614942192715568,0.514703430895577,0.98775256867763,0,0.703702806881416,0.648119116109707,0.977424915930974,1.03993478527958,0,0.463721619900307,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,2.68026024534958,0,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,0,0,0.473107245101804,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0.206768026122887,0,0,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.483437798366489,0.40101294060657,0.552485933615378,0.114814448164607,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0.850468526382578,0,0,0,0.501689773854853,1.27438136522519,1.66215201785745,0,0,0,1.79515087581472,0.656029291399411,0.325378394664303,0,0.366277859273374,0.495056999523528,1.14853107599234,1.30012049207304,0,0.290012154876366,0.462145851343933,0.15350367472613,0,0.107420244868274,0.725083469571143,0.340906509664404,0,0.165284915360978,0.960950336825531,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0.429374660225974,0,0.632758849437452,0,0,0.42793898803392,0,0,0.179872457583315,0,0.353437207037059,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0.288666338176536,0.670302275535787,0,0.282431402330337,0,0,0.886860307073351,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0.534120355637366,0,0.490080431962063,0,0.28853842595289,0,0.478278818186467,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.586032717087576,0.606802608747567,0,0,0.47748896947538,0.296964680832639,0,0,0.422008249231538,0.333926115068718,0,0.422250816255987,0.597743964753209,0,0,0.20453736500431,0,0.311039587661807,0,0.358042349351218,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0.787139999965761,0,0,0.508507300585533,0.236387681767936,1.72371686620732,0.583209226766509,1.21537496453305,0,0.241192877250816,0,0.995213339381022,1.77328571372128,0.87754158861589,0.32681539055697,0,0.307801034015188,0,1.1528195219403,0.538545866458633,0.760531603454056,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,1.41353071433941,3.89499551535764,0,0.619202951523374,0,0,0.123563938946503,0.208843899010911,0.539209063845416,1.60515529459758,0.702793337176017,0,0.391329237864179,0,0,0,1.83643656978294,0.442306057399416,0.450970258243478,0.622129148383483,0,0.330991955875499,0.627865836814451,0,0.284609546029793,0.138674673013139,1.21491816834592,0,0.69647365264322,0.34945333648406,0,0.387025325156341,0.51162521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|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.85870796139317,0.273748850145768,0.376627918784408,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.767175371061182,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,1.34171076742555,1.98794652482228,1.62671520017326,1.86589899027667,1.7662459561294,3.28479623168247,0,0,0,0,0,0.473227200159376,1.01150814046861,0.241011029883482,0.220587945464788,0.217879444092406,1.18635309555548,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.614942192715568,0.514703430895577,0.98775256867763,0,0.703702806881416,0.648119116109707,0.977424915930974,1.03993478527958,0,0.463721619900307,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,2.68026024534958,0,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,0,0,0.473107245101804,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0.206768026122887,0,0,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.483437798366489,0.40101294060657,0.552485933615378,0.114814448164607,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0.850468526382578,0,0,0,0.501689773854853,1.27438136522519,1.66215201785745,0,0,0,1.79515087581472,0.656029291399411,0.325378394664303,0,0.366277859273374,0.495056999523528,1.14853107599234,1.30012049207304,0,0.290012154876366,0.462145851343933,0.15350367472613,0,0.107420244868274,0.725083469571143,0.340906509664404,0,0.165284915360978,0.960950336825531,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0.429374660225974,0,0.632758849437452,0,0,0.42793898803392,0,0,0.179872457583315,0,0.353437207037059,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0.288666338176536,0.670302275535787,0,0.282431402330337,0,0,0.886860307073351,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0.534120355637366,0,0.490080431962063,0,0.28853842595289,0,0.478278818186467,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.586032717087576,0.606802608747567,0,0,0.47748896947538,0.296964680832639,0,0,0.422008249231538,0.333926115068718,0,0.422250816255987,0.597743964753209,0,0,0.20453736500431,0,0.311039587661807,0,0.358042349351218,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0.787139999965761,0,0,0.508507300585533,0.236387681767936,1.72371686620732,0.583209226766509,1.21537496453305,0,0.241192877250816,0,0.995213339381022,1.77328571372128,0.87754158861589,0.32681539055697,0,0.307801034015188,0,1.1528195219403,0.538545866458633,0.760531603454056,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,1.41353071433941,3.89499551535764,0,0.619202951523374,0,0,0.123563938946503,0.208843899010911,0.539209063845416,1.60515529459758,0.702793337176017,0,0.391329237864179,0,0,0,1.83643656978294,0.442306057399416,0.450970258243478,0.622129148383483,0,0.330991955875499,0.627865836814451,0,0.284609546029793,0.138674673013139,1.21491816834592,0,0.69647365264322,0.34945333648406,0,0.387025325156341,0.51162521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| ||
|short_description=p6@LGALSL | |||
}} | }} |
Latest revision as of 23:39, 17 September 2015
Short description: | p6@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LGALSL_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000462737_5end |
EntrezGene: | LGALSL |
HGNC: | 25012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.91e-18 | 5 |
epithelial cell of large intestine | 2.22e-08 | 2 |
sebum secreting cell | 1.63e-07 | 2 |
epithelial cell of sweat gland | 1.63e-07 | 2 |
epithelial cell of skin gland | 1.63e-07 | 2 |
acinar cell of sebaceous gland | 1.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 6.43e-08 | 2 |
muscle organ | 6.43e-08 | 2 |
skin gland | 1.63e-07 | 2 |
epidermis gland | 1.63e-07 | 2 |
gland of integumental system | 1.63e-07 | 2 |
sebaceous gland | 1.63e-07 | 2 |
skin sebaceous gland | 1.63e-07 | 2 |
sweat gland | 1.63e-07 | 2 |
sweat gland placode | 1.63e-07 | 2 |
sebaceous gland placode | 1.63e-07 | 2 |
sympathetic nervous system | 6.26e-07 | 5 |
autonomic nervous system | 6.26e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.76e-14 | 22 |
germ cell cancer | 8.76e-14 | 22 |
neuroectodermal tumor | 1.07e-08 | 10 |
cell type cancer | 7.88e-08 | 143 |