FFCP PHASE1:Hg19::chr2:56145005..56145022,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:56145005..56145022,-
|short_description=p@chr2:56145005..56145022,-
|description=CAGE_peak_at_chr2:56145005..56145022,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:56145005..56145022,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56145005..56145022,- | |||
|id=chr2:56145005..56145022,- | |||
|ontology_enrichment_celltype=CL:0000222!5.52e-21!119;CL:0002139!2.73e-17!24;CL:0000213!4.73e-16!57;CL:0000215!4.73e-16!57;CL:0002078!2.41e-14!44;CL:0000115!1.80e-13!35;CL:0000071!4.04e-13!18;CL:0002546!4.04e-13!18;CL:0000220!1.10e-10!246;CL:0002321!2.38e-10!248;CL:0000055!5.83e-10!180;CL:1000413!2.99e-08!9;CL:0000057!5.15e-08!75;CL:0000076!6.61e-08!62;CL:0000187!2.39e-07!54;CL:0000680!6.74e-07!57;CL:0000056!6.74e-07!57;CL:0000355!6.74e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.64e-31;24!CL:0000071;5.01e-24;18!CL:0000115;2.67e-21;36!CL:0002078;5.88e-19;45!CL:0000213;5.03e-17;58!CL:0000215;5.03e-17;58!CL:1000413;1.55e-14;9!CL:0000153;4.53e-09;9!CL:0000447;4.53e-09;9!CL:0002138;5.16e-09;6!CL:0002544;1.40e-08;6!CL:0002548;2.20e-08;6!CL:0000135;5.77e-08;3!CL:0000388;5.77e-08;3!CL:0002144;9.23e-08;3!CL:0000076;1.43e-07;63!CL:0002494;4.11e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.77e-32,24;CL:0000213,2.27e-29,58;CL:0000215,2.27e-29,58;CL:0000115,7.02e-26,36;CL:0002078,7.05e-26,45;CL:0000071,2.67e-24,18;CL:0002546,2.67e-24,18;CL:0000222,1.14e-20,121;CL:0000057,1.27e-14,76;CL:1000413,1.47e-14,9;CL:0000076,1.12e-11,63;CL:0000153,4.10e-09,9;CL:0000447,4.10e-09,9;CL:0005020,5.18e-09,6;CL:0002138,5.18e-09,6;CL:0005022,5.18e-09,6;CL:0002544,1.36e-08,6;CL:0002548,2.71e-08,6;CL:0002321,3.96e-08,250;CL:0000135,4.56e-08,3;CL:0000388,4.56e-08,3;CL:0002144,1.16e-07,3;CL:0002494,5.77e-07,16;CL:0002580,6.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.01e-24;18!CL:0005022;5.16e-09;6!CL:0000222;7.65e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.44e-21!79;UBERON:0007798!1.44e-21!79;UBERON:0004872!1.83e-20!84;UBERON:0001009!5.04e-20!113;UBERON:0004535!8.17e-20!110;UBERON:0000055!1.93e-19!69;UBERON:0001981!1.82e-17!60;UBERON:0007500!1.82e-17!60;UBERON:0004537!1.82e-17!60;UBERON:0006965!1.82e-17!60;UBERON:0000477!1.67e-14!286;UBERON:0003914!7.09e-14!118;UBERON:0001637!2.82e-13!42;UBERON:0003509!2.82e-13!42;UBERON:0004572!2.82e-13!42;UBERON:0001986!4.04e-13!18;UBERON:0004638!4.04e-13!18;UBERON:0004852!4.04e-13!18;UBERON:0006914!2.65e-12!25;UBERON:0004111!5.97e-11!241;UBERON:0000487!1.76e-10!22;UBERON:0000483!2.42e-09!309;UBERON:0000490!3.50e-09!138;UBERON:0000119!6.27e-09!312;UBERON:0000025!9.79e-09!194;UBERON:0000468!1.52e-08!659;UBERON:0004573!2.20e-08!33;UBERON:0004571!2.20e-08!33;UBERON:0003915!2.99e-08!9;UBERON:0004700!2.99e-08!9;UBERON:0001917!2.99e-08!9;UBERON:0007100!3.54e-07!27;UBERON:0000948!4.11e-07!24;UBERON:0005498!4.11e-07!24;UBERON:0004140!4.11e-07!24;UBERON:0009881!4.11e-07!24;UBERON:0004141!4.11e-07!24;UBERON:0003084!4.11e-07!24;UBERON:0007005!4.11e-07!24;UBERON:0004139!4.11e-07!24;UBERON:0004291!4.11e-07!24;UBERON:0000467!7.37e-07!625;UBERON:0000480!9.28e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.01e-24;18!UBERON:0001986;5.01e-24;18!UBERON:0004852;5.01e-24;18!UBERON:0006914;1.42e-21;25!UBERON:0000487;7.02e-19;22!UBERON:0003915;1.55e-14;9!UBERON:0004700;1.55e-14;9!UBERON:0001917;1.55e-14;9!UBERON:0000055;1.30e-13;65!UBERON:0000490;2.37e-13;33!UBERON:0001637;7.15e-13;42!UBERON:0003509;7.15e-13;42!UBERON:0004572;7.15e-13;42!UBERON:0007500;2.41e-11;56!UBERON:0001981;2.41e-11;56!UBERON:0004537;2.41e-11;56!UBERON:0004457;5.19e-11;9!UBERON:0000042;5.19e-11;9!UBERON:0002049;7.48e-11;75!UBERON:0007798;7.48e-11;75!UBERON:0004573;1.71e-10;33!UBERON:0004571;1.71e-10;33!UBERON:0000947;9.53e-10;21!UBERON:0010191;9.53e-10;21!UBERON:0003688;2.20e-08;6!UBERON:0002358;2.20e-08;6!UBERON:0003684;2.20e-08;6!UBERON:0001178;2.20e-08;6!UBERON:0004535;2.38e-08;109!UBERON:0003914;5.68e-08;74!UBERON:0007846;5.77e-08;3!UBERON:0000043;5.77e-08;3!UBERON:0007845;5.77e-08;3!UBERON:0010523;9.23e-08;3!UBERON:0001915;9.23e-08;3!UBERON:0001982;9.23e-08;3!UBERON:0001009;9.30e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.67e-24,18;UBERON:0001986,2.67e-24,18;UBERON:0004852,2.67e-24,18;UBERON:0000055,1.43e-23,68;UBERON:0004535,8.84e-23,109;UBERON:0002049,2.37e-22,78;UBERON:0007798,2.37e-22,78;UBERON:0001009,7.59e-22,112;UBERON:0006914,8.59e-22,25;UBERON:0004872,1.21e-21,83;UBERON:0007500,3.64e-19,59;UBERON:0001981,3.64e-19,59;UBERON:0004537,3.64e-19,59;UBERON:0006965,3.64e-19,59;UBERON:0000487,4.24e-19,22;UBERON:0003914,1.45e-17,117;UBERON:0001637,5.16e-15,42;UBERON:0003509,5.16e-15,42;UBERON:0004572,5.16e-15,42;UBERON:0003915,1.47e-14,9;UBERON:0004700,1.47e-14,9;UBERON:0001917,1.47e-14,9;UBERON:0004573,1.29e-10,33;UBERON:0004571,1.29e-10,33;UBERON:0000947,6.46e-10,21;UBERON:0010191,6.46e-10,21;UBERON:0003688,2.34e-08,6;UBERON:0002358,2.34e-08,6;UBERON:0003684,2.34e-08,6;UBERON:0001178,2.34e-08,6;UBERON:0007846,4.56e-08,3;UBERON:0000043,4.56e-08,3;UBERON:0007845,4.56e-08,3;UBERON:0004457,6.20e-08,12;UBERON:0000042,6.20e-08,12;UBERON:0000025,9.22e-08,192;UBERON:0004111,9.58e-08,240;UBERON:0010523,1.16e-07,3;UBERON:0001915,1.16e-07,3;UBERON:0001982,1.16e-07,3;UBERON:0003081,5.82e-07,203 | |||
|phase1_expression=1.63510541343501,2.78330681058278,1.83240725324762,2.00146596706261,0.893922188854576,3.48935409640147,0,0,1.04474251279935,0,0,0,0,0,0.662794751455832,0,1.80808358407193,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,1.02290049474824,2.89151321907653,4.51204119572301,5.35932120155048,0.795285947051099,2.43317435151318,0.189069634328136,0.221729397462564,0.966182642624386,0.130979075497713,0,0,0,0,0,0,0,0,1.19257444420023,2.58070378531837,0.347140501607594,1.69592382577203,3.35599548967925,3.85165258716094,5.22487416342026,0.258416759169329,1.42306505074684,1.67360306382335,2.01414658554573,6.0821768457481,3.41686880567437,1.47065232138347,7.29127753093584,2.67899184852239,0.44905874525234,1.80178368773316,3.06633274931766,0,1.83201743930407,0,0,0,2.48485975847659,2.65924074495618,0.264818361626438,8.3182620017156,2.12801029319014,2.80338800071154,0,1.2333377420858,1.24484414159907,2.02066008104532,1.63461903113459,0,1.15235184896,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,1.70148274740032,0.89694817844431,1.92201649936711,1.69545520927649,0.600182192168805,0.92747276314595,0.257640540045629,0.18611685633159,0,1.07180705677318,0.504867548488229,1.38074847963449,2.58633690910099,1.77504796258307,0.604512589365842,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0.352226082707465,2.16549671641611,5.09284063834272,5.51737041480335,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.45579603071565,0.892144943985809,0.473107245101804,0.468565659970853,0.300946099727719,4.5481500811197,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0,0,0,0.604780586659361,1.73675465473144,1.68808170616869,2.52594084989766,1.40953064181271,2.04682899626681,1.44768529029247,0,0,0.355123450626254,0,0,0,0,0.200506470303285,0.368323955743585,0.229628896329213,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,4.75015015424707,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,1.30012049207304,0,0,0.308097234229289,0.307007349452259,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,1.5740617341532,0,0.616067160352178,0,0,1.11194531462352,0.715624433709956,0,0.316379424718726,3.0500831027812,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.589062011728432,0.404364963146632,0,0,0.975267478179181,2.68084838594413,1.05650146756755,0,0.989838023675989,2.26016233240486,0.551365343546124,0.66343897524122,4.82295973779139,0,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0,0.294747123039363,0.35667105148125,0,10.9775970354785,12.1839110395164,0,0.349934720244983,0.384888450902048,1.34060455107157,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0.614321404198464,0,0.140669416410513,0.222617410045812,0,0,1.79323189425963,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.789147245095469,0,1.11136990144637,0,0.185536196323703,0,0,0,0.724999575434793,0.455173793141999,0.254253650292766,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0.41827123283581,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0.90392296312213,1.50746117111426,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,1.71906176567983,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0,1.08089965062721,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,1.6135860539956,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0.999843263696853,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.568209015825267,0.50313580350515,2.66943366478961,0.457680136793847,2.57092570397506,0.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| ||
|short_description=p@chr2:56145005..56145022,- | |||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56145005..56145022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56145005..56145022, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.77e-32 | 24 |
lining cell | 2.27e-29 | 58 |
barrier cell | 2.27e-29 | 58 |
endothelial cell | 7.02e-26 | 36 |
meso-epithelial cell | 7.05e-26 | 45 |
blood vessel endothelial cell | 2.67e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.67e-24 | 18 |
mesodermal cell | 1.14e-20 | 121 |
fibroblast | 1.27e-14 | 76 |
endothelial cell of artery | 1.47e-14 | 9 |
squamous epithelial cell | 1.12e-11 | 63 |
GAG secreting cell | 4.10e-09 | 9 |
carbohydrate secreting cell | 4.10e-09 | 9 |
lymphangioblast | 5.18e-09 | 6 |
endothelial cell of lymphatic vessel | 5.18e-09 | 6 |
vascular lymphangioblast | 5.18e-09 | 6 |
aortic endothelial cell | 1.36e-08 | 6 |
cardiac fibroblast | 2.71e-08 | 6 |
embryonic cell | 3.96e-08 | 250 |
fibrocyte | 4.56e-08 | 3 |
tendon cell | 4.56e-08 | 3 |
capillary endothelial cell | 1.16e-07 | 3 |
cardiocyte | 5.77e-07 | 16 |
preadipocyte of the breast | 6.54e-07 | 3 |