FFCP PHASE1:Hg19::chr2:43452255..43452260,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:43452255..43452260,-
|short_description=p@chr2:43452255..43452260,-
|description=CAGE_peak_at_chr2:43452255..43452260,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:43452255..43452260,- | |||
|coexpression_cluster_id=C816 | |||
|description=CAGE_peak_at_chr2:43452255..43452260,- | |||
|id=chr2:43452255..43452260,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.95e-27;3!CL:0000097;6.66e-17;5!CL:0000624;2.66e-14;6!CL:0000094;6.13e-11;8!CL:0000791;1.37e-10;18!CL:0000789;1.37e-10;18!CL:0002419;1.37e-10;18!CL:0000163;7.91e-10;9!CL:0000081;3.31e-08;11!CL:0000623;5.54e-08;3!CL:0000084;8.61e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.39e-27,3;CL:0000097,8.14e-17,5;CL:0002028,8.14e-17,5;CL:0000624,2.85e-14,6;CL:0000738,2.48e-11,136;CL:0000094,5.41e-11,8;CL:0000791,1.37e-10,18;CL:0000789,1.37e-10,18;CL:0002420,1.37e-10,18;CL:0002419,1.37e-10,18;CL:0000790,1.37e-10,18;CL:0000163,8.84e-10,9;CL:0000838,1.12e-09,52;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000542,1.70e-09,53;CL:0000051,1.70e-09,53;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177;CL:0000081,3.03e-08,11;CL:0000623,5.18e-08,3;CL:0000825,5.18e-08,3;CL:0000084,8.61e-08,25;CL:0000827,8.61e-08,25;CL:0002031,8.73e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.37e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;7.26e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,7.76e-08,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0,0,0.32389366601898,0,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0.526768169550154,0.590129310341499,2.35806457649499,2.05601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0.593146252648242,0.535081656179426,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.802320587350522,1.15859523106239,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.355009592516614,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0,1.03664057770386,5.33243827642757,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,2.80315847317372,0.77005821767849,0,0,0,0,0,1.49801404789436,5.9832291840805,0.414415513436035,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.647142602455851,0.640365346820666,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.349839999984783,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.384751292518985,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0.992332043623902,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0.6828739083758,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0.307988420568741,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0.655678681511872,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0.436350690340377,1.0580536810308,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0,0.129177819672012,0.248298857183432,0.112131862580613,0.381882949668989,0.202117188958219,0.653150243690884,0.342233301085281,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.603821380773079,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0,0,0.32389366601898,0,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0.526768169550154,0.590129310341499,2.35806457649499,2.05601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0.593146252648242,0.535081656179426,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.802320587350522,1.15859523106239,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.355009592516614,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0,1.03664057770386,5.33243827642757,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,2.80315847317372,0.77005821767849,0,0,0,0,0,1.49801404789436,5.9832291840805,0.414415513436035,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.647142602455851,0.640365346820666,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.349839999984783,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.384751292518985,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0.992332043623902,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0.6828739083758,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0.307988420568741,0,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0.655678681511872,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0.436350690340377,1.0580536810308,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0,0.129177819672012,0.248298857183432,0.112131862580613,0.381882949668989,0.202117188958219,0.653150243690884,0.342233301085281,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.603821380773079,0 | ||
|short_description=p@chr2:43452255..43452260,- | |||
}} | }} |
Latest revision as of 10:16, 29 July 2015
Short description: | p@chr2:43452255..43452260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43452255..43452260, - |
Coexpression cluster: | C816_Mast_Neutrophils_CD4_CD8_Natural_colon_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.39e-27 | 3 |
mast cell | 8.14e-17 | 5 |
basophil mast progenitor cell | 8.14e-17 | 5 |
CD4-positive, alpha-beta T cell | 2.85e-14 | 6 |
leukocyte | 2.48e-11 | 136 |
granulocyte | 5.41e-11 | 8 |
mature alpha-beta T cell | 1.37e-10 | 18 |
alpha-beta T cell | 1.37e-10 | 18 |
immature T cell | 1.37e-10 | 18 |
mature T cell | 1.37e-10 | 18 |
immature alpha-beta T cell | 1.37e-10 | 18 |
endocrine cell | 8.84e-10 | 9 |
lymphoid lineage restricted progenitor cell | 1.12e-09 | 52 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
lymphocyte | 1.70e-09 | 53 |
common lymphoid progenitor | 1.70e-09 | 53 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
blood cell | 3.03e-08 | 11 |
natural killer cell | 5.18e-08 | 3 |
pro-NK cell | 5.18e-08 | 3 |
T cell | 8.61e-08 | 25 |
pro-T cell | 8.61e-08 | 25 |
hematopoietic lineage restricted progenitor cell | 8.73e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
duodenum | 7.76e-08 | 2 |