FFCP PHASE1:Mm9::chr19:6498166..6498173,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18190 | |EntrezGene=18190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |MCL_coexpression_id=42 | ||
|TSSclassifier=NA | |||
|UniProt=E9PUN1,Q3TQ54 | |UniProt=E9PUN1,Q3TQ54 | ||
|association_with_transcript=331bp_to_ENSMUST00000113459,uc008giy.1_5end | |association_with_transcript=331bp_to_ENSMUST00000113459,uc008giy.1_5end | ||
|cluster_id=chr19:6498166..6498173,+ | |||
|description=CAGE_peak_18_at_Nrxn2_5end | |description=CAGE_peak_18_at_Nrxn2_5end | ||
|id=chr19:6498166..6498173,+ | |id=chr19:6498166..6498173,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.34e-13!23;CL:0000337!1.34e-13!23;CL:0002319!7.45e-13!43;CL:0000221!1.80e-12!44;CL:0000133!1.80e-12!44;CL:0000055!1.68e-10!50;CL:0002612!8.57e-09!3;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33;CL:0000393!6.04e-07!39;CL:0000211!6.04e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.34e-13!23;CL:0000337!1.34e-13!23;CL:0002319!7.45e-13!43;CL:0000221!1.80e-12!44;CL:0000133!1.80e-12!44;CL:0000055!1.68e-10!50;CL:0002612!8.57e-09!3;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33;CL:0000393!6.04e-07!39;CL:0000211!6.04e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,9.50e-23,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.00e-21!75;UBERON:0001016!1.00e-21!75;UBERON:0001017!7.74e-21!73;UBERON:0005743!7.74e-21!73;UBERON:0004121!1.06e-16!102;UBERON:0000924!1.06e-16!102;UBERON:0006601!1.06e-16!102;UBERON:0001049!2.02e-16!52;UBERON:0005068!2.02e-16!52;UBERON:0006241!2.02e-16!52;UBERON:0007135!2.02e-16!52;UBERON:0000955!2.81e-13!50;UBERON:0006238!2.81e-13!50;UBERON:0002346!4.03e-13!71;UBERON:0003075!4.03e-13!71;UBERON:0007284!4.03e-13!71;UBERON:0003076!8.97e-13!12;UBERON:0003057!8.97e-13!12;UBERON:0002616!6.40e-12!49;UBERON:0000033!8.80e-11!63;UBERON:0002020!6.90e-10!34;UBERON:0001948!4.99e-09!5;UBERON:0002315!4.99e-09!5;UBERON:0002257!8.57e-09!3;UBERON:0002780!9.16e-08!39;UBERON:0001890!9.16e-08!39;UBERON:0006240!9.16e-08!39;UBERON:0002240!1.67e-07!6;UBERON:0005174!1.67e-07!6;UBERON:0001137!1.67e-07!6;UBERON:0003080!1.68e-07!40;UBERON:0004733!8.59e-07!6;UBERON:0004732!8.59e-07!6;UBERON:0002028!8.59e-07!6;UBERON:0007277!8.59e-07!6 | |ontology_enrichment_uberon=UBERON:0000073!1.00e-21!75;UBERON:0001016!1.00e-21!75;UBERON:0001017!7.74e-21!73;UBERON:0005743!7.74e-21!73;UBERON:0004121!1.06e-16!102;UBERON:0000924!1.06e-16!102;UBERON:0006601!1.06e-16!102;UBERON:0001049!2.02e-16!52;UBERON:0005068!2.02e-16!52;UBERON:0006241!2.02e-16!52;UBERON:0007135!2.02e-16!52;UBERON:0000955!2.81e-13!50;UBERON:0006238!2.81e-13!50;UBERON:0002346!4.03e-13!71;UBERON:0003075!4.03e-13!71;UBERON:0007284!4.03e-13!71;UBERON:0003076!8.97e-13!12;UBERON:0003057!8.97e-13!12;UBERON:0002616!6.40e-12!49;UBERON:0000033!8.80e-11!63;UBERON:0002020!6.90e-10!34;UBERON:0001948!4.99e-09!5;UBERON:0002315!4.99e-09!5;UBERON:0002257!8.57e-09!3;UBERON:0002780!9.16e-08!39;UBERON:0001890!9.16e-08!39;UBERON:0006240!9.16e-08!39;UBERON:0002240!1.67e-07!6;UBERON:0005174!1.67e-07!6;UBERON:0001137!1.67e-07!6;UBERON:0003080!1.68e-07!40;UBERON:0004733!8.59e-07!6;UBERON:0004732!8.59e-07!6;UBERON:0002028!8.59e-07!6;UBERON:0007277!8.59e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,9.50e-23,2;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12;UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0001948,5.59e-10,5;UBERON:0002315,5.59e-10,5;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0,1.32521124570968,0.244981598429908,0,0,0,0.127687338085188,0,0.395658863190582,0.548925861614458,0,0.279182999001381,0,0,0.883885756421003,0.711858403995515,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,7.74952815209784,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0,1.32521124570968,0.244981598429908,0,0,0,0.127687338085188,0,0.395658863190582,0.548925861614458,0,0.279182999001381,0,0,0.883885756421003,0.711858403995515,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,7.74952815209784,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | ||
|short_description=p18@Nrxn2 | |short_description=p18@Nrxn2 | ||
}} | }} |
Latest revision as of 03:12, 26 September 2015
Short description: | p18@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 331bp_to_ENSMUST00000113459, uc008giy.1_5end |
EntrezGene: | Nrxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 9.50e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 9.50e-23 | 2 |
posterior neural tube | 1.13e-15 | 12 |
chordal neural plate | 1.13e-15 | 12 |
cerebellum | 3.12e-12 | 4 |
regional part of metencephalon | 3.12e-12 | 4 |
metencephalon | 3.12e-12 | 4 |
future metencephalon | 3.12e-12 | 4 |
rhombic lip | 3.12e-12 | 4 |
regional part of spinal cord | 5.59e-10 | 5 |
gray matter of spinal cord | 5.59e-10 | 5 |
segmental subdivision of hindbrain | 1.29e-08 | 6 |
segmental subdivision of nervous system | 1.29e-08 | 6 |
hindbrain | 1.29e-08 | 6 |
presumptive hindbrain | 1.29e-08 | 6 |
spinal cord | 1.52e-08 | 6 |
dorsal region element | 1.52e-08 | 6 |
dorsum | 1.52e-08 | 6 |